RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 ATG101Q9BSB4 218 aa12.68□□□□□ -0.38
SCNN1A-202ENST00000338748 C7orf69Q9H7B7 122 aa12.68□□□□□ -0.38
SCNN1A-202ENST00000338748 TRAV30A0A087WSZ9 112 aa12.68□□□□□ -0.38
SCNN1A-202ENST00000338748 TRAV8-1A0A0A6YYK1 113 aa12.68□□□□□ -0.38
SCNN1A-202ENST00000338748 TCRAP04437 139 aa12.68□□□□□ -0.38
SCNN1A-202ENST00000338748 CBLN1P23435 193 aa12.68□□□□□ -0.38
SCNN1A-202ENST00000338748 SLC35B1P78383 322 aa12.68□□□□□ -0.38
SCNN1A-202ENST00000338748 LINC00527Q9UJ94 153 aa12.68□□□□□ -0.38
SCNN1A-202ENST00000338748 KLF12Q9Y4X4 402 aa12.68□□□□□ -0.38
SCNN1A-202ENST00000338748 SPINK4O60575 86 aa12.67□□□□□ -0.38
SCNN1A-202ENST00000338748 RHOGP84095 191 aa12.67□□□□□ -0.38
SCNN1A-202ENST00000338748 PRR27Q6MZM9 219 aa12.67□□□□□ -0.38
SCNN1A-202ENST00000338748 TMEM68Q96MH6 324 aa12.67□□□□□ -0.38
SCNN1A-202ENST00000338748 TRAPPC1Q9Y5R8 145 aa12.67□□□□□ -0.38
SCNN1A-202ENST00000338748 TRBV19A0A075B6N1 114 aa12.66□□□□□ -0.38
SCNN1A-202ENST00000338748 COL8A1P27658 744 aa12.66□□□□□ -0.38
SCNN1A-202ENST00000338748 GPR183P32249 361 aa12.66□□□□□ -0.38
SCNN1A-202ENST00000338748 UBE2G1P62253 170 aa12.66□□□□□ -0.38
SCNN1A-202ENST00000338748 S100A12P80511 92 aa12.66□□□□□ -0.38
SCNN1A-202ENST00000338748 TENM4Q6N022 2769 aa12.66□□□□□ -0.38
SCNN1A-202ENST00000338748 BPIFA4PQ86YQ2 179 aa12.66□□□□□ -0.38
SCNN1A-202ENST00000338748 SERTAD4Q9NUC0 356 aa12.66□□□□□ -0.38
SCNN1A-202ENST00000338748 HIF1ANQ9NWT6 349 aa12.66□□□□□ -0.38
SCNN1A-202ENST00000338748 A0A1B0GUS0 222 aa12.66□□□□□ -0.38
SCNN1A-202ENST00000338748 KRTAP10-9P60411 292 aa12.66□□□□□ -0.38
SCNN1A-202ENST00000338748 LINC00322Q6ZN03 302 aaPredicted RBP12.66□□□□□ -0.38
SCNN1A-202ENST00000338748 MS4A10Q96PG2 267 aa12.66□□□□□ -0.38
SCNN1A-202ENST00000338748 GSN-AS1Q9NRJ2 163 aa12.66□□□□□ -0.38
SCNN1A-202ENST00000338748 MOB4Q9Y3A3 225 aa12.66□□□□□ -0.38
SCNN1A-202ENST00000338748 TRBV9A0A0B4J1U6 114 aa12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 XKRY2A2RUG3 117 aa12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 COX6B1P14854 86 aa12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 LY6EQ16553 131 aa12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 SIGLEC15Q6ZMC9 328 aa12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 MAPK1IP1LQ8NDC0 245 aa12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 ZNF502Q8TBZ5 544 aa12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 BTF3L4Q96K17 158 aa12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 CCDC140Q96MF4 163 aa12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 MLST8Q9BVC4 326 aa12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 MEGF9Q9H1U4 602 aa12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 OTORQ9NRC9 128 aa12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 PITPNC1Q9UKF7 332 aa12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 APCP25054 2843 aa12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 ZNF705GA8MUZ8 300 aaPredicted RBP12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 ASCL2Q99929 193 aa12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 GAR1Q9NY12 217 aaKnown RBP12.65□□□□□ -0.38
SCNN1A-202ENST00000338748 MXRA5Q9NR99 2828 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 A0A096LNT2 108 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 NUDT10Q8NFP7 164 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 OR4F17Q8NGA8 305 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 NUDT11Q96G61 164 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 LTAP01374 205 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 IGLV2-11P01706 119 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 FABP4P15090 132 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 S100A2P29034 98 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 IER3P46695 156 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 KLK9Q2XQG4 91 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 GOLT1AQ6ZVE7 132 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 VN1R17PQ8TDU5 208 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 MBD6Q96DN6 1003 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 GPR82Q96P67 336 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 KLK9Q9UKQ9 250 aa12.64□□□□□ -0.39
SCNN1A-202ENST00000338748 TRAV9-1A0A075B6T8 112 aa12.63□□□□□ -0.39
SCNN1A-202ENST00000338748 SMIM27A0A1W2PRY6 76 aa12.63□□□□□ -0.39
SCNN1A-202ENST00000338748 B4DSR2 109 aa12.63□□□□□ -0.39
SCNN1A-202ENST00000338748 M0R3E3 92 aa12.63□□□□□ -0.39
SCNN1A-202ENST00000338748 CLEC3BP05452 202 aa12.63□□□□□ -0.39
SCNN1A-202ENST00000338748 COA6Q5JTJ3 125 aaKnown RBP12.63□□□□□ -0.39
SCNN1A-202ENST00000338748 TMEM183AQ8IXX5 376 aa12.63□□□□□ -0.39
SCNN1A-202ENST00000338748 OR10D4PQ8NGN7 298 aa12.63□□□□□ -0.39
SCNN1A-202ENST00000338748 HIST1H2BLQ99880 126 aa12.63□□□□□ -0.39
SCNN1A-202ENST00000338748 LINC00587B1AMM8 73 aa12.62□□□□□ -0.39
SCNN1A-202ENST00000338748 H3BUX3 64 aa12.62□□□□□ -0.39
SCNN1A-202ENST00000338748 PAX1P15863 534 aa12.62□□□□□ -0.39
SCNN1A-202ENST00000338748 C19orf54Q5BKX5 351 aa12.62□□□□□ -0.39
SCNN1A-202ENST00000338748 PYY3Q5JQD4 70 aa12.62□□□□□ -0.39
SCNN1A-202ENST00000338748 CDPF1Q6NVV7 123 aa12.62□□□□□ -0.39
SCNN1A-202ENST00000338748 FMC1Q96HJ9 113 aa12.62□□□□□ -0.39
SCNN1A-202ENST00000338748 C9orf152Q5JTZ5 239 aa12.62□□□□□ -0.39
SCNN1A-202ENST00000338748 MRPL54Q6P161 138 aaKnown RBP12.62□□□□□ -0.39
SCNN1A-202ENST00000338748 FAM231DQ6ZW35 169 aa12.62□□□□□ -0.39
SCNN1A-202ENST00000338748 Q86TA4 180 aa12.62□□□□□ -0.39
SCNN1A-202ENST00000338748 CREBBPQ92793 2442 aa12.62□□□□□ -0.39
SCNN1A-202ENST00000338748 CLEC19AQ6UXS0 136 aa12.61□□□□□ -0.39
SCNN1A-202ENST00000338748 CMTM2Q8TAZ6 248 aa12.61□□□□□ -0.39
SCNN1A-202ENST00000338748 TXN2Q99757 166 aa12.61□□□□□ -0.39
SCNN1A-202ENST00000338748 SNURFLB1AK76 121 aa12.61□□□□□ -0.39
SCNN1A-202ENST00000338748 CTAG1AP78358 180 aa12.61□□□□□ -0.39
SCNN1A-202ENST00000338748 TOMM20LQ6UXN7 152 aa12.61□□□□□ -0.39
SCNN1A-202ENST00000338748 Q6ZS46 218 aa12.61□□□□□ -0.39
SCNN1A-202ENST00000338748 MRPL18Q9H0U6 180 aaKnown RBP12.61□□□□□ -0.39
SCNN1A-202ENST00000338748 ZFAND3Q9H8U3 227 aa12.61□□□□□ -0.39
SCNN1A-202ENST00000338748 TRAV41A0A0B4J266 112 aa12.6□□□□□ -0.39
SCNN1A-202ENST00000338748 GRIFINA4D1Z8 144 aa12.6□□□□□ -0.39
SCNN1A-202ENST00000338748 GATCO43716 136 aaKnown RBP12.6□□□□□ -0.39
SCNN1A-202ENST00000338748 PRNTQ86SH4 94 aa12.6□□□□□ -0.39
SCNN1A-202ENST00000338748 CIARTQ8N365 385 aaPredicted RBP12.6□□□□□ -0.39
SCNN1A-202ENST00000338748 A6NDX4 124 aa12.6□□□□□ -0.39
SCNN1A-202ENST00000338748 ZNF785A8K8V0 405 aa12.6□□□□□ -0.39
SCNN1A-202ENST00000338748 AMBPP02760 352 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms