RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 TEX43Q6ZNM6 134 aa10.09□□□□□ -0.79
FN1-202ENST00000336916 LINC00469Q8N7U9 141 aa10.09□□□□□ -0.79
FN1-202ENST00000336916 A0A1B0GW64 132 aa10.09□□□□□ -0.79
FN1-202ENST00000336916 PRTN3P24158 256 aa10.09□□□□□ -0.79
FN1-202ENST00000336916 PRDM13Q9H4Q3 707 aa10.09□□□□□ -0.79
FN1-202ENST00000336916 EDA2RQ9HAV5 297 aa10.09□□□□□ -0.79
FN1-202ENST00000336916 PLPPR1Q8TBJ4 325 aa10.09□□□□□ -0.79
FN1-202ENST00000336916 H3BTX0 84 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 C1orf194Q5T5A4 169 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 GATA4P43694 442 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 FOXF2Q12947 444 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 SRSF6Q13247 344 aaKnown RBP10.08□□□□□ -0.8
FN1-202ENST00000336916 RASL10AQ92737 203 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 H0YJW9 148 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 IGKCP01834 107 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 TDGF1P3P51864 188 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 SIGLEC9Q9Y336 463 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 ADAMTS20P59510 1910 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 M0R2P5 195 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 ID3Q02535 119 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 FAM201AQ5SY85 155 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 GRIFINA4D1Z8 144 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 A6NNC1 897 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 LEPROTO15243 131 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 GNLYP22749 145 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 COL4A4P53420 1690 aaPredicted RBP10.08□□□□□ -0.8
FN1-202ENST00000336916 ZNF837Q96EG3 531 aaPredicted RBP10.08□□□□□ -0.8
FN1-202ENST00000336916 CRIM1Q9NZV1 1036 aa10.08□□□□□ -0.8
FN1-202ENST00000336916 CA1P00915 261 aaPredicted RBP10.07□□□□□ -0.8
FN1-202ENST00000336916 ATXN8Q156A1 80 aa10.07□□□□□ -0.8
FN1-202ENST00000336916 CT83Q5H943 113 aa10.07□□□□□ -0.8
FN1-202ENST00000336916 SPANXA1Q9NS26 97 aa10.07□□□□□ -0.8
FN1-202ENST00000336916 NOTCH2Q04721 2471 aa10.07□□□□□ -0.8
FN1-202ENST00000336916 F8VVB4 439 aa10.07□□□□□ -0.8
FN1-202ENST00000336916 F8VWA3 439 aa10.07□□□□□ -0.8
FN1-202ENST00000336916 PSG1P11464 419 aa10.07□□□□□ -0.8
FN1-202ENST00000336916 SRRM4A7MD48 611 aaKnown RBP10.07□□□□□ -0.8
FN1-202ENST00000336916 NIT1Q86X76 327 aa10.07□□□□□ -0.8
FN1-202ENST00000336916 MBD3L1Q8WWY6 194 aa10.07□□□□□ -0.8
FN1-202ENST00000336916 CHAC1Q9BUX1 264 aa10.07□□□□□ -0.8
FN1-202ENST00000336916 DEFB121Q5J5C9 76 aa10.07□□□□□ -0.8
FN1-202ENST00000336916 C1QCP02747 245 aa10.07□□□□□ -0.8
FN1-202ENST00000336916 SAA4P35542 130 aa10.06□□□□□ -0.8
FN1-202ENST00000336916 FOXL1Q12952 345 aa10.06□□□□□ -0.8
FN1-202ENST00000336916 LCNL1Q6ZST4 164 aa10.06□□□□□ -0.8
FN1-202ENST00000336916 FOXA3P55318 350 aaPredicted RBP10.06□□□□□ -0.8
FN1-202ENST00000336916 PSPNO60542 156 aa10.06□□□□□ -0.8
FN1-202ENST00000336916 NABP1Q96AH0 204 aa10.06□□□□□ -0.8
FN1-202ENST00000336916 TEX48A0A1B0GUV7 120 aa10.06□□□□□ -0.8
FN1-202ENST00000336916 LYZL4Q96KX0 146 aa10.06□□□□□ -0.8
FN1-202ENST00000336916 GFRA4Q9GZZ7 299 aa10.06□□□□□ -0.8
FN1-202ENST00000336916 TRGV1A0A0A0MS02 117 aa10.06□□□□□ -0.8
FN1-202ENST00000336916 GAS1P54826 345 aa10.06□□□□□ -0.8
FN1-202ENST00000336916 RPL23P62829 140 aaKnown RBP10.06□□□□□ -0.8
FN1-202ENST00000336916 CD300CQ08708 224 aa10.06□□□□□ -0.8
FN1-202ENST00000336916 SPANXDQ9BXN6 97 aa10.06□□□□□ -0.8
FN1-202ENST00000336916 GLMPQ8WWB7 406 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 KLF12Q9Y4X4 402 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 SPCS1Q9Y6A9 102 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 TMEM170AQ8WVE7 144 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 WDR83OSQ9Y284 106 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 PMS2P5A8MQ11 134 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 PSG3Q16557 428 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 S4R3C0 116 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 ZNF562Q6V9R5 426 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 IFI27L1Q96BM0 104 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 A8MXK9 166 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 MUC21Q5SSG8 566 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 ARL6IP6Q8N6S5 226 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 RNASE7Q9H1E1 156 aaKnown RBP10.05□□□□□ -0.8
FN1-202ENST00000336916 DOPEY1Q5JWR5 2465 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 A8MWV9 139 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 LINC00158P58513 81 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 SFTA2Q6UW10 78 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 ASCL4Q6XD76 172 aa10.05□□□□□ -0.8
FN1-202ENST00000336916 AGMATQ9BSE5 352 aa10.04□□□□□ -0.8
FN1-202ENST00000336916 GGTLC1Q9BX51 225 aa10.04□□□□□ -0.8
FN1-202ENST00000336916 ZNHIT1O43257 154 aa10.04□□□□□ -0.8
FN1-202ENST00000336916 IGKV1-9A0A0C4DH69 117 aa10.04□□□□□ -0.8
FN1-202ENST00000336916 A0A1B0GWB2 263 aa10.04□□□□□ -0.8
FN1-202ENST00000336916 SLC17A3O00476 420 aa10.04□□□□□ -0.8
FN1-202ENST00000336916 OTX1P32242 354 aaPredicted RBP10.04□□□□□ -0.8
FN1-202ENST00000336916 SSBP4Q9BWG4 385 aaPredicted RBP10.04□□□□□ -0.8
FN1-202ENST00000336916 IFITM3Q01628 133 aa10.04□□□□□ -0.8
FN1-202ENST00000336916 A0A1B0GUS0 222 aa10.04□□□□□ -0.8
FN1-202ENST00000336916 Q5PR19 223 aa10.04□□□□□ -0.8
FN1-202ENST00000336916 Q8TCH9 128 aa10.04□□□□□ -0.8
FN1-202ENST00000336916 MGST2Q99735 147 aa10.04□□□□□ -0.8
FN1-202ENST00000336916 TMEM75Q8N9X5 138 aa10.04□□□□□ -0.8
FN1-202ENST00000336916 ATP5G3P48201 142 aa10.03□□□□□ -0.8
FN1-202ENST00000336916 RPRMLQ8N4K4 120 aa10.03□□□□□ -0.8
FN1-202ENST00000336916 J3QKU1 62 aa10.03□□□□□ -0.8
FN1-202ENST00000336916 ACTL10Q5JWF8 245 aa10.03□□□□□ -0.8
FN1-202ENST00000336916 HIVEP3Q5T1R4 2406 aa10.03□□□□□ -0.8
FN1-202ENST00000336916 IGKV1D-13A0A0B4J2D9 117 aa10.03□□□□□ -0.8
FN1-202ENST00000336916 TNFRSF6BO95407 300 aa10.03□□□□□ -0.8
FN1-202ENST00000336916 IGKV1-13P0DP09 117 aa10.03□□□□□ -0.8
FN1-202ENST00000336916 MYMXA0A1B0GTQ4 84 aa10.03□□□□□ -0.8
FN1-202ENST00000336916 TMEM219Q86XT9 240 aa10.03□□□□□ -0.8
FN1-202ENST00000336916 H3BUA1 57 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms