RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 ARPC1AQ92747 370 aa6.96□□□□□ -1.29
SNCA-201ENST00000336904 ANKRD17O75179 2603 aaKnown RBP6.96□□□□□ -1.29
SNCA-201ENST00000336904 INS-IGF2F8WCM5 200 aa6.96□□□□□ -1.3
SNCA-201ENST00000336904 BMPR1BO00238 502 aa6.96□□□□□ -1.3
SNCA-201ENST00000336904 KRTDAPP60985 99 aa6.96□□□□□ -1.3
SNCA-201ENST00000336904 PIP4P2Q8N4L2 257 aa6.96□□□□□ -1.3
SNCA-201ENST00000336904 MAPK1IP1LQ8NDC0 245 aa6.96□□□□□ -1.3
SNCA-201ENST00000336904 OR11H6Q8NGC7 330 aa6.96□□□□□ -1.3
SNCA-201ENST00000336904 VN1R17PQ8TDU5 208 aa6.96□□□□□ -1.3
SNCA-201ENST00000336904 FANCD2OSQ96PS1 177 aa6.96□□□□□ -1.3
SNCA-201ENST00000336904 CHRDL1Q9BU40 450 aa6.96□□□□□ -1.3
SNCA-201ENST00000336904 C19orf24Q9BVV8 132 aa6.96□□□□□ -1.3
SNCA-201ENST00000336904 ODF3BA8MYP8 253 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 ZNF253O75346 499 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 TCRAP04437 139 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 YPEL3P61236 119 aaPredicted RBP6.95□□□□□ -1.3
SNCA-201ENST00000336904 S100A12P80511 92 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 DEFA6Q01524 100 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 RNF125Q96EQ8 232 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 GPR183P32249 361 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 CEACAM3P40198 252 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 ATP5IP56385 69 aaPredicted RBP6.95□□□□□ -1.3
SNCA-201ENST00000336904 CTAG1AP78358 180 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 LY6EQ16553 131 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 ZNF491Q8N8L2 437 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 Q8TAT8 98 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 TBX15Q96SF7 602 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 OSTCQ9NRP0 149 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 DDTP30046 118 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 MYCNOSP40205 109 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 PDLIM4P50479 330 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 ZNF138P52744 262 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 LCNL1Q6ZST4 164 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 GTSF1Q8WW33 167 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 NEU4Q8WWR8 484 aaPredicted RBP6.95□□□□□ -1.3
SNCA-201ENST00000336904 C14orf144Q96I85 54 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 C8orf49Q96NF6 230 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 ZNF331Q9NQX6 463 aaPredicted RBP6.95□□□□□ -1.3
SNCA-201ENST00000336904 PAM16Q9Y3D7 125 aa6.95□□□□□ -1.3
SNCA-201ENST00000336904 IGKV2-40A0A087WW87 121 aaPredicted RBP6.94□□□□□ -1.3
SNCA-201ENST00000336904 F8W735 103 aaPredicted RBP6.94□□□□□ -1.3
SNCA-201ENST00000336904 IGKV2D-40P01614 121 aaPredicted RBP6.94□□□□□ -1.3
SNCA-201ENST00000336904 IGHV4-39P01824 125 aa6.94□□□□□ -1.3
SNCA-201ENST00000336904 AMTP48728 403 aa6.94□□□□□ -1.3
SNCA-201ENST00000336904 COA6Q5JTJ3 125 aaKnown RBP6.94□□□□□ -1.3
SNCA-201ENST00000336904 RNF2Q99496 336 aa6.94□□□□□ -1.3
SNCA-201ENST00000336904 SONP18583 2426 aaKnown RBP6.94□□□□□ -1.3
SNCA-201ENST00000336904 IGHV7-81A0A0B4J1V7 117 aa6.94□□□□□ -1.3
SNCA-201ENST00000336904 SMIM27A0A1W2PRY6 76 aa6.94□□□□□ -1.3
SNCA-201ENST00000336904 ATP6V0E1O15342 81 aa6.94□□□□□ -1.3
SNCA-201ENST00000336904 APCSP02743 223 aa6.94□□□□□ -1.3
SNCA-201ENST00000336904 PAX1P15863 534 aa6.94□□□□□ -1.3
SNCA-201ENST00000336904 DTX2Q86UW9 622 aa6.94□□□□□ -1.3
SNCA-201ENST00000336904 ATG101Q9BSB4 218 aa6.94□□□□□ -1.3
SNCA-201ENST00000336904 MCRIP2Q9BUT9 160 aaKnown RBP6.94□□□□□ -1.3
SNCA-201ENST00000336904 POLR3KQ9Y2Y1 108 aaPredicted RBP6.94□□□□□ -1.3
SNCA-201ENST00000336904 ARL2-SNX15V9GYD0 113 aa6.94□□□□□ -1.3
SNCA-201ENST00000336904 SETD2Q9BYW2 2564 aaPredicted RBP6.94□□□□□ -1.3
SNCA-201ENST00000336904 MXRA5Q9NR99 2828 aa6.94□□□□□ -1.3
SNCA-201ENST00000336904 TSTD3H0UI37 97 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 HLA-DRB1P01911 266 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 TMEM183BQ1AE95 376 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 LCN12Q6JVE5 192 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 UNQ5815/PRO19632Q6UWF5 114 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 SIRPDQ9H106 197 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 PRORYQ9H606 182 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 C7orf69Q9H7B7 122 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 FBXL7Q9UJT9 491 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 TBL2Q9Y4P3 447 aaKnown RBP6.93□□□□□ -1.3
SNCA-201ENST00000336904 TRAV40A0A0B4J280 105 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 A0A1B0GV90 55 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 A1L4Q6 167 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 H0Y8G0 127 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 CSN3P07498 182 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 EGR2P11161 476 aaPredicted RBP6.93□□□□□ -1.3
SNCA-201ENST00000336904 COL8A1P27658 744 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 LMO4P61968 165 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 MAJINQ3KP22 176 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 RNASEKQ6P5S7 137 aaKnown RBP6.93□□□□□ -1.3
SNCA-201ENST00000336904 C5orf17Q8NAS9 161 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 ZC2HC1AQ96GY0 325 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 GPR82Q96P67 336 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 C21orf62Q9NYP8 219 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 TP73-AS1Q9UF72 201 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 IGHV4-61A0A0C4DH41 118 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 IZUMO1RA6ND01 250 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 M0R1W7 72 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 P01737 135 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 TAS2R60P59551 318 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 C15orf32Q32M92 178 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 Q86TA4 180 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 RNF182Q8N6D2 247 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 Q8N9W7 124 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 TMEM75Q8N9X5 138 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 MBD6Q96DN6 1003 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 MRPL27Q9P0M9 148 aaKnown RBP6.93□□□□□ -1.3
SNCA-201ENST00000336904 NAGKQ9UJ70 344 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 LY96Q9Y6Y9 160 aa6.93□□□□□ -1.3
SNCA-201ENST00000336904 CCDC168Q8NDH2 2452 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 IGLV11-55A0A075B6I3 123 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms