RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 ACOT6Q3I5F7 207 aaPredicted RBP13.17□□□□□ -0.3
CHGA-202ENST00000334654 TMEM61Q8N0U2 210 aa13.17□□□□□ -0.3
CHGA-202ENST00000334654 RPP25LQ8N5L8 163 aaKnown RBP13.17□□□□□ -0.3
CHGA-202ENST00000334654 DYNLRB2Q8TF09 96 aa13.17□□□□□ -0.3
CHGA-202ENST00000334654 C17orf77Q96MU5 243 aa13.17□□□□□ -0.3
CHGA-202ENST00000334654 MRPS12O15235 138 aaKnown RBP13.16□□□□□ -0.3
CHGA-202ENST00000334654 SAMD5Q5TGI4 173 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 FAM78BQ5VT40 261 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 ALKAL2Q6UX46 152 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 SAT2Q96F10 170 aaPredicted RBP13.16□□□□□ -0.3
CHGA-202ENST00000334654 NARS2Q96I59 477 aaKnown RBP13.16□□□□□ -0.3
CHGA-202ENST00000334654 RPRMQ9NS64 109 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 MED9Q9NWA0 146 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 PFDN2Q9UHV9 154 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 SMAD5-AS1Q9Y6J3 95 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 ZNF785A8K8V0 405 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 UMAD1C9J7I0 102 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 G3V4G9 280 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 MIR17HGQ75NE6 70 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 TCF24Q7RTU0 167 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 OR10G4Q8NGN3 311 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 OR10G9Q8NGN4 311 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 OR10G7Q8NGN6 311 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 TMED6Q8WW62 240 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 FAM167A-AS1Q96KT0 104 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 TMEM231Q9H6L2 316 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 SLC25A22Q9H936 323 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 FUT9Q9Y231 359 aa13.16□□□□□ -0.3
CHGA-202ENST00000334654 BMI1P35226 326 aa13.15□□□□□ -0.3
CHGA-202ENST00000334654 TMEM41BQ5BJD5 291 aa13.15□□□□□ -0.3
CHGA-202ENST00000334654 OR8I2Q8N0Y5 310 aa13.15□□□□□ -0.3
CHGA-202ENST00000334654 OR2K2Q8NGT1 345 aa13.15□□□□□ -0.3
CHGA-202ENST00000334654 GRAMD2BQ96HH9 432 aa13.15□□□□□ -0.3
CHGA-202ENST00000334654 TRAV25A0A0B4J276 109 aa13.14□□□□□ -0.31
CHGA-202ENST00000334654 LINC00862A6NCI5 91 aa13.14□□□□□ -0.31
CHGA-202ENST00000334654 TSPAN4O14817 238 aa13.14□□□□□ -0.31
CHGA-202ENST00000334654 EIF3GO75821 320 aaKnown RBP eCLIP13.14□□□□□ -0.31
CHGA-202ENST00000334654 MBP02144 154 aa13.14□□□□□ -0.31
CHGA-202ENST00000334654 SULT1A2P50226 295 aa13.14□□□□□ -0.31
CHGA-202ENST00000334654 ZNF726P1Q15940 193 aa13.14□□□□□ -0.31
CHGA-202ENST00000334654 SIGLEC15Q6ZMC9 328 aa13.14□□□□□ -0.31
CHGA-202ENST00000334654 SSX7Q7RTT5 188 aa13.14□□□□□ -0.31
CHGA-202ENST00000334654 S100A7AQ86SG5 101 aa13.14□□□□□ -0.31
CHGA-202ENST00000334654 SLC25A2Q9BXI2 301 aa13.14□□□□□ -0.31
CHGA-202ENST00000334654 MRPL32Q9BYC8 188 aaKnown RBP13.14□□□□□ -0.31
CHGA-202ENST00000334654 S100A7P31151 101 aa13.13□□□□□ -0.31
CHGA-202ENST00000334654 RHOBP62745 196 aa13.13□□□□□ -0.31
CHGA-202ENST00000334654 BLOC1S1P78537 153 aa13.13□□□□□ -0.31
CHGA-202ENST00000334654 EGFEM1PQ0D2K5 195 aa13.13□□□□□ -0.31
CHGA-202ENST00000334654 FAM122CQ6P4D5 195 aa13.13□□□□□ -0.31
CHGA-202ENST00000334654 ZNF503Q96F45 646 aa13.13□□□□□ -0.31
CHGA-202ENST00000334654 GPR61Q9BZJ8 451 aa13.13□□□□□ -0.31
CHGA-202ENST00000334654 CD5P06127 495 aa13.12□□□□□ -0.31
CHGA-202ENST00000334654 NMBP08949 121 aa13.12□□□□□ -0.31
CHGA-202ENST00000334654 GP9P14770 177 aa13.12□□□□□ -0.31
CHGA-202ENST00000334654 FHITP49789 147 aa13.12□□□□□ -0.31
CHGA-202ENST00000334654 KRTAP10-11P60412 298 aa13.12□□□□□ -0.31
CHGA-202ENST00000334654 AKR1C8PQ5T2L2 129 aa13.12□□□□□ -0.31
CHGA-202ENST00000334654 DPPA3Q6W0C5 159 aa13.12□□□□□ -0.31
CHGA-202ENST00000334654 GPR82Q96P67 336 aa13.12□□□□□ -0.31
CHGA-202ENST00000334654 DNAH3Q8TD57 4116 aa13.11□□□□□ -0.31
CHGA-202ENST00000334654 HELTA6NFD8 242 aa13.11□□□□□ -0.31
CHGA-202ENST00000334654 RBPMS2Q6ZRY4 209 aaKnown RBP13.11□□□□□ -0.31
CHGA-202ENST00000334654 RAB24Q969Q5 203 aa13.11□□□□□ -0.31
CHGA-202ENST00000334654 MS4A6AQ9H2W1 248 aa13.11□□□□□ -0.31
CHGA-202ENST00000334654 ZNF256Q9Y2P7 627 aaPredicted RBP13.11□□□□□ -0.31
CHGA-202ENST00000334654 IGKV3-7A0A075B6H7 116 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 A0A1W2PPV4 95 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 RPL7P18124 248 aaKnown RBP13.1□□□□□ -0.31
CHGA-202ENST00000334654 CDC34P49427 236 aaPredicted RBP13.1□□□□□ -0.31
CHGA-202ENST00000334654 BEAN1Q3B7T3 259 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 LCN12Q6JVE5 192 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 BPIFA4PQ86YQ2 179 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 GBGT1Q8N5D6 347 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 DCANP1Q8TF63 244 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 TMEM14CQ9P0S9 112 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 RNF24Q9Y225 148 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 A0A087X0K7 114 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 H3BQ15 152 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 HMGB3O15347 200 aaKnown RBP13.1□□□□□ -0.31
CHGA-202ENST00000334654 STAG3L2P0CL84 134 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 STAG3L3P0CL85 134 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 IGLC2P0DOY2 106 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 PYYP10082 97 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 GALR1P47211 349 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 RPL11P62913 178 aaKnown RBP13.1□□□□□ -0.31
CHGA-202ENST00000334654 KPRPQ5T749 579 aaPredicted RBP13.1□□□□□ -0.31
CHGA-202ENST00000334654 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.1□□□□□ -0.31
CHGA-202ENST00000334654 SPAG8Q99932 426 aaPredicted RBP13.1□□□□□ -0.31
CHGA-202ENST00000334654 ACTR3CQ9C0K3 210 aaPredicted RBP13.1□□□□□ -0.31
CHGA-202ENST00000334654 K7EQG2 157 aa13.09□□□□□ -0.31
CHGA-202ENST00000334654 SOCS3O14543 225 aa13.09□□□□□ -0.31
CHGA-202ENST00000334654 SNRPCP09234 159 aaKnown RBP13.09□□□□□ -0.31
CHGA-202ENST00000334654 STXBP6Q8NFX7 210 aa13.09□□□□□ -0.31
CHGA-202ENST00000334654 NRN1Q9NPD7 142 aa13.09□□□□□ -0.31
CHGA-202ENST00000334654 TRAV2A0A0B4J234 112 aa13.08□□□□□ -0.32
CHGA-202ENST00000334654 CTXND1A0A1B0GTU2 59 aa13.08□□□□□ -0.32
CHGA-202ENST00000334654 FAM74A1Q5RGS3 127 aa13.08□□□□□ -0.32
CHGA-202ENST00000334654 FAM24BQ8N5W8 94 aa13.08□□□□□ -0.32
CHGA-202ENST00000334654 FXYD5Q96DB9 178 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms