RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 PAFAH1B2P68402 229 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 SNAI3Q3KNW1 292 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 UBE2NLQ5JXB2 153 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM69Q5SWH9 247 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 C1orf146Q5VVC0 180 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 TMUB2Q71RG4 321 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM179BQ7Z7N9 219 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 ZNF645Q8N7E2 425 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 ATP6V1C2Q8NEY4 427 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 OR52L2PQ8NGH6 319 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 OR1L8Q8NGR8 309 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 OR5H6Q8NGV6 325 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 SFT2D1Q8WV19 159 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 CANT1Q8WVQ1 401 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 GGHQ92820 318 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 MAL2Q969L2 176 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 MOB3AQ96BX8 217 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 COQ2Q96H96 371 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 PGAM5Q96HS1 289 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 RARRES2Q99969 163 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 URM1Q9BTM9 101 aaKnown RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 MLST8Q9BVC4 326 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 CCDC90BQ9GZT6 254 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 SLC5A7Q9GZV3 580 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 OR51E2Q9H255 320 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 SYT4Q9H2B2 425 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 SLC39A9Q9NUM3 307 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 MTCH1Q9NZJ7 389 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 CKLFQ9UBR5 152 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 FIS1Q9Y3D6 152 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 OBSCNQ5VST9 7968 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 IGKV1-27A0A075B6S5 117 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 SERTM2A0A1B0GWG4 89 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 OR2W5A6NFC9 320 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 IFITM5A6NNB3 132 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 PRSS47A8MTI9 375 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 DCTN6O00399 190 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 CHEK1O14757 476 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 PLA2G10O15496 165 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 PFDN1O60925 122 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 RPS28P62857 69 aaKnown RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 FMODQ06828 376 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 COTL1Q14019 142 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 JOSD1Q15040 202 aaPredicted RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 RHEBQ15382 184 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 KISS1Q15726 138 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 UBE2V2Q15819 145 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 MEP1BQ16820 701 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 CD300EQ496F6 205 aaPredicted RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 AWAT2Q6E213 333 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 KRTAP26-1Q6PEX3 210 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 SLC25A26Q70HW3 274 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 RPS27LQ71UM5 84 aaKnown RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 NEGR1Q7Z3B1 354 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 VTCN1Q7Z7D3 282 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 MTURNQ8N3F0 131 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 DHRSXQ8N5I4 330 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 OR4S2Q8NH73 311 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 GPX8Q8TED1 209 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 SPRYD4Q8WW59 207 aaPredicted RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 FCAMRQ8WWV6 532 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 AP3S1Q92572 193 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 RPEQ96AT9 228 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 SMIM12Q96EX1 92 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 C2orf50Q96LR7 162 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 C8orf49Q96NF6 230 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 NMNAT3Q96T66 252 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 DPCDQ9BVM2 203 aaPredicted RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 LPAR5Q9H1C0 372 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 Q9H8V8 135 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 RNF121Q9H920 327 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 TRBV24-1A0A075B6N3 115 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 IGLV5-52A0A0A0MRZ9 124 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 TRAV8-4A0A0B4J246 113 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 A0A1B0GX51 115 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 C7orf71A4D174 169 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 PRR32B1ATL7 298 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 PPP5D1E7EU14 171 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 LRRN3E7EW58 273 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 F5H697 171 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 H7C2Y5 167 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 ATP6V0E1O15342 81 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 SYT7O43581 403 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 RGS10O43665 173 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 PITX3O75364 302 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 CDS2O95674 445 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 OR2H2O95918 312 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 P01737 135 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 GYPAP02724 150 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 CRYGDP07320 174 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 CTSDP07339 412 aaPredicted RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 GNB3P16520 340 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 ZNF182P17025 639 aaPredicted RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 ANXA7P20073 488 aaKnown RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 SERPINA2P20848 420 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 EIF5AP63241 154 aaKnown RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 KLF9Q13886 244 aaPredicted RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 MRPL23Q16540 153 aaKnown RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 C2orf83Q53S99 150 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 NMSQ5H8A3 153 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms