RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 TRAV12-1A0A0B4J245 112 aa8.65□□□□□ -1.02
SPTBN1-201ENST00000333896 BAALCQ8WXS3 180 aa8.65□□□□□ -1.02
SPTBN1-201ENST00000333896 C1QCP02747 245 aa8.65□□□□□ -1.03
SPTBN1-201ENST00000333896 HMGA1P17096 107 aaKnown RBP8.65□□□□□ -1.03
SPTBN1-201ENST00000333896 CFPP27918 469 aa8.65□□□□□ -1.03
SPTBN1-201ENST00000333896 Q6ZWC4 215 aa8.65□□□□□ -1.03
SPTBN1-201ENST00000333896 CT55Q8WUE5 264 aa8.65□□□□□ -1.03
SPTBN1-201ENST00000333896 CHCHD5Q9BSY4 110 aa8.65□□□□□ -1.03
SPTBN1-201ENST00000333896 DMRTC2Q8IXT2 367 aaPredicted RBP8.65□□□□□ -1.03
SPTBN1-201ENST00000333896 IGLV1-36A0A0B4J1U3 117 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 A0A1W2PRX2 142 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 ID3Q02535 119 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 COX14Q96I36 57 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 H3BMG7 143 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 NUP35Q8NFH5 326 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 A0A1W2PPI3 338 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 EGR2P11161 476 aaPredicted RBP8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 GAS1P54826 345 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 LCN12Q6JVE5 192 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 LINC01555Q8NAE3 123 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 DEFB104AQ8WTQ1 72 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 RASL10BQ96S79 203 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 CFHR5Q9BXR6 569 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 RNASE8Q8TDE3 154 aaKnown RBP8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 BRWD3Q6RI45 1802 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 LINC01590Q5TEZ4 76 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 ZNF826PQ6ZT77 177 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 MBNL3Q9NUK0 354 aaKnown RBP8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 NOTCH4Q99466 2003 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 TRAV26-1A0A087WT03 109 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 PSCAO43653 123 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 UBE2DNLQ8IWF7 75 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 SOCS3O14543 225 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 PRB2P02812 416 aaPredicted RBP8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 EFNB3Q15768 340 aa8.64□□□□□ -1.03
SPTBN1-201ENST00000333896 ZPLD1Q8TCW7 415 aa8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 CCL19Q99731 98 aa8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 KIAA1671Q9BY89 1806 aa8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 IGHV3OR16-8A0A075B7F1 116 aa8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 PILRBQ9UKJ0 227 aa8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 SCARF2Q96GP6 870 aaPredicted RBP8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 MRPS18CQ9Y3D5 142 aaKnown RBP8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 DEFB124Q8NES8 71 aa8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 IGLC7A0M8Q6 106 aa8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 TMEM240Q5SV17 173 aa8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 CLEC19AQ6UXS0 136 aa8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 DSCR8Q96T75 97 aa8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 CHKB-CPT1BH3BT56 60 aa8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 OSR1Q8TAX0 266 aaPredicted RBP8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 TMEM167AQ8TBQ9 72 aa8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 ITLN1Q8WWA0 313 aa8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 NABP1Q96AH0 204 aa8.63□□□□□ -1.03
SPTBN1-201ENST00000333896 WFDC11Q8NEX6 87 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 LHFPL6Q9Y693 200 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 RPUSD1Q9UJJ7 312 aaKnown RBP8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 IGHG3P01860 377 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 PHF7Q9BWX1 381 aaPredicted RBP8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 IGHV3-73A0A0B4J1V6 119 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 FABP5P3A8MUU1 101 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 PPIFP30405 207 aaKnown RBP8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 YPEL3P61236 119 aaPredicted RBP8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 LGALS9BQ3B8N2 356 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 LGALS9CQ6DKI2 356 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 C18orf32Q8TCD1 76 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 UBL5Q9BZL1 73 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 SPTY2D1-AS1A0A0U1RR47 76 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 A0A1W2PPV9 198 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 CXCL5P42830 114 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 COX6B1P14854 86 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 LHFPL1Q86WI0 220 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 TEN1Q86WV5 123 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 PRADC1Q9BSG0 188 aa8.62□□□□□ -1.03
SPTBN1-201ENST00000333896 FOXI2Q6ZQN5 318 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 SLC50A1Q9BRV3 221 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 NCOR2Q9Y618 2525 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 AHRRA9YTQ3 701 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 CCL3P10147 92 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 SPATA31B1PQ5VZV4 182 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 LYPD6BQ8NI32 183 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 IFI27L2Q9H2X8 130 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 WFDC1Q9HC57 220 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 TM4SF5O14894 197 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 TAX1BP3O14907 124 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 HAMPP81172 84 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 MIR17HGQ75NE6 70 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 DLL3Q9NYJ7 618 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 TRAV25A0A0B4J276 109 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 YPEL1O60688 119 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 RPL39P5Q59GN2 51 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 YPEL2Q96QA6 119 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 LIFP15018 202 aa8.61□□□□□ -1.03
SPTBN1-201ENST00000333896 ANKHD1Q8IWZ3 2542 aaKnown RBP8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 NRN1LQ496H8 165 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 SLC25A47Q6Q0C1 308 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 WFDC12Q8WWY7 111 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 FBXL7Q9UJT9 491 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 HRKO00198 91 aa8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 PFN1P07737 140 aaKnown RBP8.6□□□□□ -1.03
SPTBN1-201ENST00000333896 PSG4Q00888 419 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 345.1 ms