RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 CRYBB3P26998 211 aa10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 S100A7P31151 101 aa10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 AP2S1P53680 142 aaPredicted RBP10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 GAMTQ14353 236 aa10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 STHQ8IWL8 128 aa10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 C12orf45Q8N5I9 185 aaPredicted RBP10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 OR51G1Q8NGK1 321 aa10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 ST8SIA2Q92186 375 aa10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 PSENENQ9NZ42 101 aa10.43□□□□□ -0.74
CTHRC1-201ENST00000330295 TRAV2A0A0B4J234 112 aa10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 IGHV3-66A0A0C4DH42 116 aa10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 C5orf51A6NDU8 294 aa10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 SNRPGP15A8MWD9 76 aa10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 L7N2F9 121 aa10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 SSSCA1O60232 199 aa10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 DFFBO76075 338 aa10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 P2RY1P47900 373 aa10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 POLR2GP62487 172 aaKnown RBP eCLIP10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 VAMP2P63027 116 aa10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 GBGT1Q8N5D6 347 aa10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 ZBTB8BQ8NAP8 495 aaPredicted RBP10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 CSNK1G2-AS1Q8NCQ2 148 aa10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 OR4D5Q8NGN0 318 aa10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 SMIM8Q96KF7 97 aa10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 CLEC5AQ9NY25 188 aa10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 RABAC1Q9UI14 185 aa10.42□□□□□ -0.74
CTHRC1-201ENST00000330295 SPP1P10451 314 aa10.41□□□□□ -0.74
CTHRC1-201ENST00000330295 PSG1P11464 419 aa10.41□□□□□ -0.74
CTHRC1-201ENST00000330295 TAS2R30P59541 319 aa10.41□□□□□ -0.74
CTHRC1-201ENST00000330295 DEFB131AP59861 70 aa10.41□□□□□ -0.74
CTHRC1-201ENST00000330295 AKR1C1Q04828 323 aa10.41□□□□□ -0.74
CTHRC1-201ENST00000330295 FAM90A2PQ658T7 463 aa10.41□□□□□ -0.74
CTHRC1-201ENST00000330295 SEC22CQ9BRL7 303 aa10.41□□□□□ -0.74
CTHRC1-201ENST00000330295 H3BP45 60 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 APOHP02749 345 aaPredicted RBP10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 IL5P05113 134 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 SPART-AS1P0CW21 52 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 PVALBP20472 110 aaPredicted RBP10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 OR8G2PQ6IF36 304 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 TMEM88Q6PEY1 159 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 GSG1LQ6UXU4 331 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 TRPT1Q86TN4 253 aaKnown RBP10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 STXBP6Q8NFX7 210 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 OR10P1Q8NGE3 313 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 PPP1R14BQ96C90 147 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 RNF125Q96EQ8 232 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 ZNF414Q96IQ9 312 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 TRGV9Q99603 122 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 PBDC1Q9BVG4 233 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 MS4A6AQ9H2W1 248 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 PGPEP1Q9NXJ5 209 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 RNF213Q63HN8 5207 aa10.4□□□□□ -0.74
CTHRC1-201ENST00000330295 SMCO3A2RU48 225 aa10.39□□□□□ -0.75
CTHRC1-201ENST00000330295 PRAF2O60831 178 aa10.39□□□□□ -0.75
CTHRC1-201ENST00000330295 TSC22D2O75157 780 aa10.39□□□□□ -0.75
CTHRC1-201ENST00000330295 HTN3P15516 51 aa10.39□□□□□ -0.75
CTHRC1-201ENST00000330295 S100A7AQ86SG5 101 aa10.39□□□□□ -0.75
CTHRC1-201ENST00000330295 C2orf50Q96LR7 162 aa10.39□□□□□ -0.75
CTHRC1-201ENST00000330295 MGAT4CQ9UBM8 478 aa10.39□□□□□ -0.75
CTHRC1-201ENST00000330295 FUSP35637 526 aaKnown RBP eCLIP10.38□□□□□ -0.75
CTHRC1-201ENST00000330295 LYZP61626 148 aa10.38□□□□□ -0.75
CTHRC1-201ENST00000330295 THAP8Q8NA92 274 aa10.38□□□□□ -0.75
CTHRC1-201ENST00000330295 C15orf53Q8NAA6 179 aa10.38□□□□□ -0.75
CTHRC1-201ENST00000330295 BPIFCQ8NFQ6 507 aa10.38□□□□□ -0.75
CTHRC1-201ENST00000330295 U3KQE9 123 aa10.38□□□□□ -0.75
CTHRC1-201ENST00000330295 CCSO14618 274 aa10.37□□□□□ -0.75
CTHRC1-201ENST00000330295 MBPP02686 304 aaPredicted RBP10.37□□□□□ -0.75
CTHRC1-201ENST00000330295 BCAP31P51572 246 aa10.37□□□□□ -0.75
CTHRC1-201ENST00000330295 ZNF90Q03938 601 aa10.37□□□□□ -0.75
CTHRC1-201ENST00000330295 OR2F1Q13607 317 aa10.37□□□□□ -0.75
CTHRC1-201ENST00000330295 ICAM4Q14773 271 aa10.37□□□□□ -0.75
CTHRC1-201ENST00000330295 USF2Q15853 346 aaPredicted RBP10.37□□□□□ -0.75
CTHRC1-201ENST00000330295 C16orf54Q6UWD8 224 aa10.37□□□□□ -0.75
CTHRC1-201ENST00000330295 ACOT7LQ6ZUV0 252 aa10.37□□□□□ -0.75
CTHRC1-201ENST00000330295 TMEM144Q7Z5S9 345 aa10.37□□□□□ -0.75
CTHRC1-201ENST00000330295 LILRB2Q8N423 598 aa10.37□□□□□ -0.75
CTHRC1-201ENST00000330295 FNDC10F2Z333 226 aa10.36□□□□□ -0.75
CTHRC1-201ENST00000330295 INMT-MINDY4F8WBC2 141 aa10.36□□□□□ -0.75
CTHRC1-201ENST00000330295 METTL15P1P0C7V9 234 aa10.36□□□□□ -0.75
CTHRC1-201ENST00000330295 KRTAP10-1P60331 282 aa10.36□□□□□ -0.75
CTHRC1-201ENST00000330295 SNRPD3P62318 126 aaKnown RBP10.36□□□□□ -0.75
CTHRC1-201ENST00000330295 SELENOTP62341 195 aa10.36□□□□□ -0.75
CTHRC1-201ENST00000330295 DLK1P80370 383 aa10.36□□□□□ -0.75
CTHRC1-201ENST00000330295 C1orf194Q5T5A4 169 aa10.36□□□□□ -0.75
CTHRC1-201ENST00000330295 CDPF1Q6NVV7 123 aa10.36□□□□□ -0.75
CTHRC1-201ENST00000330295 SIGLEC15Q6ZMC9 328 aa10.36□□□□□ -0.75
CTHRC1-201ENST00000330295 FAM24BQ8N5W8 94 aa10.36□□□□□ -0.75
CTHRC1-201ENST00000330295 GGACTQ9BVM4 153 aa10.36□□□□□ -0.75
CTHRC1-201ENST00000330295 SLC45A2Q9UMX9 530 aa10.36□□□□□ -0.75
CTHRC1-201ENST00000330295 LSM5Q9Y4Y9 91 aaKnown RBP10.36□□□□□ -0.75
CTHRC1-201ENST00000330295 IGKV1D-37A0A075B6S9 117 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 PRSS46E5RG02 174 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 BUB3O43684 328 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 RLN2P04090 185 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 CAV2P51636 162 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 EMP1P54849 157 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 S100A10P60903 97 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 CYCSP99999 105 aaKnown RBP10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 RAB31Q13636 194 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 SAMD13Q5VXD3 122 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms