RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 A0A1B0GXF2 115 aa13.85□□□□□ -0.19
PTP4A3-201ENST00000329397 P01737 135 aa13.85□□□□□ -0.19
PTP4A3-201ENST00000329397 TSPOP30536 169 aa13.85□□□□□ -0.19
PTP4A3-201ENST00000329397 PRR30Q53SZ7 412 aaPredicted RBP13.85□□□□□ -0.19
PTP4A3-201ENST00000329397 MLST8Q9BVC4 326 aa13.85□□□□□ -0.19
PTP4A3-201ENST00000329397 MUC6Q6W4X9 2439 aa13.85□□□□□ -0.19
PTP4A3-201ENST00000329397 TCRAP04437 139 aa13.84□□□□□ -0.19
PTP4A3-201ENST00000329397 RIPPLY3P57055 190 aa13.84□□□□□ -0.19
PTP4A3-201ENST00000329397 TMEM155Q4W5P6 130 aa13.84□□□□□ -0.19
PTP4A3-201ENST00000329397 OR4A5Q8NH83 315 aa13.84□□□□□ -0.19
PTP4A3-201ENST00000329397 PSG1P11464 419 aa13.84□□□□□ -0.19
PTP4A3-201ENST00000329397 HBBP68871 147 aa13.84□□□□□ -0.19
PTP4A3-201ENST00000329397 PRNTQ86SH4 94 aa13.84□□□□□ -0.19
PTP4A3-201ENST00000329397 C17orf77Q96MU5 243 aa13.84□□□□□ -0.19
PTP4A3-201ENST00000329397 GOLT1AQ6ZVE7 132 aa13.83□□□□□ -0.19
PTP4A3-201ENST00000329397 TMEM133Q9H2Q1 129 aa13.83□□□□□ -0.19
PTP4A3-201ENST00000329397 RBP4P02753 201 aa13.83□□□□□ -0.2
PTP4A3-201ENST00000329397 CRYGCP07315 174 aa13.83□□□□□ -0.2
PTP4A3-201ENST00000329397 CSN3P07498 182 aa13.83□□□□□ -0.2
PTP4A3-201ENST00000329397 MRPL52Q86TS9 123 aaKnown RBP13.83□□□□□ -0.2
PTP4A3-201ENST00000329397 OR8B3Q8NGG8 313 aa13.83□□□□□ -0.2
PTP4A3-201ENST00000329397 PRRG2O14669 202 aa13.83□□□□□ -0.2
PTP4A3-201ENST00000329397 TNFRSF13BO14836 293 aaPredicted RBP13.83□□□□□ -0.2
PTP4A3-201ENST00000329397 OR2J3O76001 311 aa13.83□□□□□ -0.2
PTP4A3-201ENST00000329397 RASL11AQ6T310 242 aa13.83□□□□□ -0.2
PTP4A3-201ENST00000329397 PMCHL2Q9BQD1 86 aa13.83□□□□□ -0.2
PTP4A3-201ENST00000329397 SIGLEC9Q9Y336 463 aa13.83□□□□□ -0.2
PTP4A3-201ENST00000329397 A0A1W2PRD5 423 aa13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 A0A1W2PRF3 423 aa13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 A0A1W2PRM7 423 aa13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 hDV102S1A0JD36 115 aa13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 E7EQL1 145 aa13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 UBE2V1Q13404 147 aa13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 KLF5Q13887 457 aaPredicted RBP13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 FAM120AOSQ5T036 256 aa13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 C5orf17Q8NAS9 161 aa13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 ABHD17AQ96GS6 310 aa13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 IGHV2-26A0A0B4J1V2 119 aa13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 LDLRAD2Q5SZI1 272 aa13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 LINC00311Q8N616 119 aa13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 TRGV9Q99603 122 aa13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 KLF12Q9Y4X4 402 aa13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 AKAP6Q13023 2319 aa13.82□□□□□ -0.2
PTP4A3-201ENST00000329397 ATRXP46100 2492 aa13.81□□□□□ -0.2
PTP4A3-201ENST00000329397 IGHV1-24A0A0C4DH33 117 aa13.81□□□□□ -0.2
PTP4A3-201ENST00000329397 LTAP01374 205 aa13.81□□□□□ -0.2
PTP4A3-201ENST00000329397 COL8A1P27658 744 aa13.81□□□□□ -0.2
PTP4A3-201ENST00000329397 OCIAD2Q56VL3 154 aa13.81□□□□□ -0.2
PTP4A3-201ENST00000329397 KLHDC1Q8N7A1 406 aa13.81□□□□□ -0.2
PTP4A3-201ENST00000329397 DAZAP1Q96EP5 407 aaKnown RBP13.81□□□□□ -0.2
PTP4A3-201ENST00000329397 SMIM12Q96EX1 92 aa13.81□□□□□ -0.2
PTP4A3-201ENST00000329397 INSIG2Q9Y5U4 225 aa13.81□□□□□ -0.2
PTP4A3-201ENST00000329397 TRAV9-2A0A087WT02 112 aa13.81□□□□□ -0.2
PTP4A3-201ENST00000329397 TOMM40O96008 361 aa13.81□□□□□ -0.2
PTP4A3-201ENST00000329397 TMEM116Q8NCL8 245 aa13.81□□□□□ -0.2
PTP4A3-201ENST00000329397 PRSS22Q9GZN4 317 aa13.81□□□□□ -0.2
PTP4A3-201ENST00000329397 C19orf71A6NCJ1 209 aa13.8□□□□□ -0.2
PTP4A3-201ENST00000329397 A8MWL6 223 aa13.8□□□□□ -0.2
PTP4A3-201ENST00000329397 TPPP3Q9BW30 176 aa13.8□□□□□ -0.2
PTP4A3-201ENST00000329397 IGHV1-3A0A0C4DH29 117 aa13.8□□□□□ -0.2
PTP4A3-201ENST00000329397 TEX22C9J3V5 150 aa13.8□□□□□ -0.2
PTP4A3-201ENST00000329397 CA7P43166 264 aa13.8□□□□□ -0.2
PTP4A3-201ENST00000329397 LGALS7P47929 136 aa13.8□□□□□ -0.2
PTP4A3-201ENST00000329397 PLGLAQ15195 96 aa13.8□□□□□ -0.2
PTP4A3-201ENST00000329397 GFRALQ6UXV0 394 aa13.8□□□□□ -0.2
PTP4A3-201ENST00000329397 PPP1R27Q86WC6 154 aa13.8□□□□□ -0.2
PTP4A3-201ENST00000329397 HIGD1AQ9Y241 93 aa13.8□□□□□ -0.2
PTP4A3-201ENST00000329397 SPTBN1Q01082 2364 aaKnown RBP13.8□□□□□ -0.2
PTP4A3-201ENST00000329397 LY6HO94772 140 aa13.79□□□□□ -0.2
PTP4A3-201ENST00000329397 KLF17Q5JT82 389 aaPredicted RBP13.79□□□□□ -0.2
PTP4A3-201ENST00000329397 Q86TA4 180 aa13.79□□□□□ -0.2
PTP4A3-201ENST00000329397 BCL6BQ8N143 479 aaPredicted RBP13.79□□□□□ -0.2
PTP4A3-201ENST00000329397 C8orf46Q8TAG6 207 aa13.79□□□□□ -0.2
PTP4A3-201ENST00000329397 CHRDL1Q9BU40 450 aa13.79□□□□□ -0.2
PTP4A3-201ENST00000329397 IGHV1-69-2A0A0G2JMI3 117 aa13.79□□□□□ -0.2
PTP4A3-201ENST00000329397 OR4C46A6NHA9 309 aa13.79□□□□□ -0.2
PTP4A3-201ENST00000329397 SHISA9B4DS77 424 aa13.79□□□□□ -0.2
PTP4A3-201ENST00000329397 IGLC1P0CG04 106 aa13.79□□□□□ -0.2
PTP4A3-201ENST00000329397 SRSF12Q8WXF0 261 aaKnown RBP13.79□□□□□ -0.2
PTP4A3-201ENST00000329397 TMEM70Q9BUB7 260 aa13.79□□□□□ -0.2
PTP4A3-201ENST00000329397 SLC25A39Q9BZJ4 359 aaPredicted RBP13.79□□□□□ -0.2
PTP4A3-201ENST00000329397 PTPRQQ9UMZ3 2332 aa13.78□□□□□ -0.2
PTP4A3-201ENST00000329397 LIPFP07098 398 aa13.78□□□□□ -0.2
PTP4A3-201ENST00000329397 FAM71F2Q6NXP2 309 aa13.78□□□□□ -0.2
PTP4A3-201ENST00000329397 ATP5L2Q7Z4Y8 100 aa13.78□□□□□ -0.2
PTP4A3-201ENST00000329397 OR4C5Q8NGB2 326 aa13.78□□□□□ -0.2
PTP4A3-201ENST00000329397 FMC1Q96HJ9 113 aa13.78□□□□□ -0.2
PTP4A3-201ENST00000329397 F11RQ9Y624 299 aaKnown RBP13.78□□□□□ -0.2
PTP4A3-201ENST00000329397 ZFHX3Q15911 3703 aa13.78□□□□□ -0.2
PTP4A3-201ENST00000329397 CHEK1O14757 476 aa13.78□□□□□ -0.2
PTP4A3-201ENST00000329397 HRNRQ86YZ3 2850 aaPredicted RBP13.78□□□□□ -0.2
PTP4A3-201ENST00000329397 ZNF785A8K8V0 405 aa13.77□□□□□ -0.2
PTP4A3-201ENST00000329397 IGLV2-11P01706 119 aa13.77□□□□□ -0.2
PTP4A3-201ENST00000329397 RBPMS2Q6ZRY4 209 aaKnown RBP13.77□□□□□ -0.2
PTP4A3-201ENST00000329397 TEX45Q8NA69 505 aa13.77□□□□□ -0.2
PTP4A3-201ENST00000329397 OR4F17Q8NGA8 305 aa13.77□□□□□ -0.2
PTP4A3-201ENST00000329397 ORAOV1Q8WV07 137 aa13.77□□□□□ -0.2
PTP4A3-201ENST00000329397 M0R3E3 92 aa13.77□□□□□ -0.21
PTP4A3-201ENST00000329397 CRYGBP07316 175 aa13.77□□□□□ -0.21
PTP4A3-201ENST00000329397 FBLN7Q53RD9 439 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms