RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 STAG3L2P0CL84 134 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 STAG3L3P0CL85 134 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 LEPP41159 167 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 IL34Q6ZMJ4 242 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 CMTM2Q8TAZ6 248 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 OR5B12Q96R08 314 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 HRH4Q9H3N8 390 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 KIR2DL5BA0A0G2JN68 375 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 KIR2DL5BA0A0G2JPC4 375 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 MAP1LC3B2A6NCE7 125 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 OR11H12B2RN74 326 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 G3V3Q6 166 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 UBE2L3P68036 154 aaKnown RBP3.93□□□□□ -1.78
LRIT3-201ENST00000327908 FAM122CQ6P4D5 195 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 FOXI2Q6ZQN5 318 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 KIR2DL5AQ8N109 375 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 KIR2DL5BQ8NHK3 375 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 HIST1H2BAQ96A08 127 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 SMIM12Q96EX1 92 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 MAP1LC3BQ9GZQ8 125 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 CYTL1Q9NRR1 136 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 TRBV6-1A0A0K0K1D8 114 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 TEX48A0A1B0GUV7 120 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 OR7C2O60412 319 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 C5orf17Q8NAS9 161 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 OR10J6PQ8NGY7 276 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 C16orf92Q96LL3 132 aa3.93□□□□□ -1.78
LRIT3-201ENST00000327908 CSPG4Q6UVK1 2322 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 IGHV3-21A0A0B4J1V1 117 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 K7EQG2 157 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 IGHV3-23P01764 117 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 KRTAP10-3P60369 221 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 BEAN1Q3B7T3 259 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 SAMD5Q5TGI4 173 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 FAM90A2PQ658T7 463 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 WFDC1Q9HC57 220 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 RFNGQ9Y644 331 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 FN1P02751 2386 aaKnown RBP3.92□□□□□ -1.78
LRIT3-201ENST00000327908 PDE6DO43924 150 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 GP9P14770 177 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 GCHFRP30047 84 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 ZNF90Q03938 601 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 USF2Q15853 346 aaPredicted RBP3.92□□□□□ -1.78
LRIT3-201ENST00000327908 GUCA2BQ16661 112 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 TMEM182Q6ZP80 229 aaPredicted RBP3.92□□□□□ -1.78
LRIT3-201ENST00000327908 LINC00477Q96M19 166 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 PPP1R14DQ9NXH3 145 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 NBEAP1P0C6P0 100 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 RPL11P62913 178 aaKnown RBP3.92□□□□□ -1.78
LRIT3-201ENST00000327908 PSG3Q16557 428 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 C10orf99Q6UWK7 81 aa3.92□□□□□ -1.78
LRIT3-201ENST00000327908 PEA15Q15121 130 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 FAM74A3Q4VXF1 159 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 TMEM256Q8N2U0 113 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 C11orf44Q8N8P7 122 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 OR11H4Q8NGC9 324 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 FAM213BQ8TBF2 198 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 RAB24Q969Q5 203 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 RSG1Q9BU20 258 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 FLNBO75369 2602 aaKnown RBP3.91□□□□□ -1.78
LRIT3-201ENST00000327908 TRBV19A0A075B6N1 114 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 IGKV1OR2-108A0A075B7D4 117 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 NHLRC4P0CG21 123 aaPredicted RBP3.91□□□□□ -1.78
LRIT3-201ENST00000327908 NDUFA5Q16718 116 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 TM4SF20Q53R12 229 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 SAPCD1Q5SSQ6 148 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 LEMD1Q68G75 181 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 MED9Q9NWA0 146 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 MRPL36Q9P0J6 103 aaKnown RBP3.91□□□□□ -1.78
LRIT3-201ENST00000327908 TP53TG1Q9Y2A0 90 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 ITPR2Q14571 2701 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 ZNF705EA8MWA4 302 aaPredicted RBP3.91□□□□□ -1.78
LRIT3-201ENST00000327908 TRBV12-3P01733 135 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 CNN1P51911 297 aaKnown RBP3.91□□□□□ -1.78
LRIT3-201ENST00000327908 TUBA4BQ9H853 241 aa3.91□□□□□ -1.78
LRIT3-201ENST00000327908 IGLC2P0DOY2 106 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 DEFB136Q30KP8 78 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 UQCC3Q6UW78 93 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 C19orf35Q6ZS72 473 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 STHQ8IWL8 128 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 MS4A6AQ9H2W1 248 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 SLC25A22Q9H936 323 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 DOK5Q9P104 306 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 VAX2Q9UIW0 290 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 RAB19A4D1S5 217 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 TMEM189A5PLL7 270 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 A8MTW9 85 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 TMEM250H0YL14 139 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 TAS2R60P59551 318 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 MLANAQ16655 118 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 Q5BKY6 102 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 TMEM78Q5T7P6 136 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 UNQ9165/PRO28630Q6UXU0 137 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 ZNF738Q8NE65 137 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 ZNF414Q96IQ9 312 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 SCRT1Q9BWW7 348 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 ZNF331Q9NQX6 463 aaPredicted RBP3.9□□□□□ -1.78
LRIT3-201ENST00000327908 SMAD5-AS1Q9Y6J3 95 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 S4R3C0 116 aa3.9□□□□□ -1.78
LRIT3-201ENST00000327908 SMIM9A6NGZ8 99 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms