RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 MTCL1Q9Y4B5 1905 aaKnown RBP13.45□□□□□ -0.26
SMAD3-201ENST00000327367 C17orf100A8MU93 164 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 KLRD1Q13241 179 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 TDRD15B5MCY1 1934 aaKnown RBP13.45□□□□□ -0.26
SMAD3-201ENST00000327367 GAGE12JA6NER3 117 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 GAGE4Q13068 117 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 GAGE5Q13069 117 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 GAGE6Q13070 117 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 VWC2Q2TAL6 325 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 C15orf32Q32M92 178 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 UNC13CQ8NB66 2214 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 LINC00473A8K010 186 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 CEND1Q8N111 149 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 C9orf106Q8NAJ2 232 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 MESP1Q9BRJ9 268 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 TP53TG1Q9Y2A0 90 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 RBMY1FQ15415 496 aaKnown RBP13.45□□□□□ -0.26
SMAD3-201ENST00000327367 VDAC2P45880 294 aaPredicted RBP13.44□□□□□ -0.26
SMAD3-201ENST00000327367 OVOL2Q9BRP0 275 aa13.44□□□□□ -0.26
SMAD3-201ENST00000327367 KLF2Q9Y5W3 355 aaPredicted RBP13.44□□□□□ -0.26
SMAD3-201ENST00000327367 F8WEM9 126 aa13.44□□□□□ -0.26
SMAD3-201ENST00000327367 CRYBA4P53673 196 aa13.44□□□□□ -0.26
SMAD3-201ENST00000327367 C3orf56Q8N813 242 aa13.44□□□□□ -0.26
SMAD3-201ENST00000327367 C15orf53Q8NAA6 179 aa13.44□□□□□ -0.26
SMAD3-201ENST00000327367 FAM90A9PA6NNJ1 464 aa13.43□□□□□ -0.26
SMAD3-201ENST00000327367 PFN2P35080 140 aa13.43□□□□□ -0.26
SMAD3-201ENST00000327367 Q86TA4 180 aa13.43□□□□□ -0.26
SMAD3-201ENST00000327367 COL11A1P12107 1806 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-201ENST00000327367 NEGR1Q7Z3B1 354 aa13.43□□□□□ -0.26
SMAD3-201ENST00000327367 ICE1Q9Y2F5 2266 aa13.43□□□□□ -0.26
SMAD3-201ENST00000327367 C15orf62A8K5M9 175 aa13.43□□□□□ -0.26
SMAD3-201ENST00000327367 CARD19Q96LW7 228 aa13.43□□□□□ -0.26
SMAD3-201ENST00000327367 GAGE7O76087 117 aa13.43□□□□□ -0.26
SMAD3-201ENST00000327367 GAGE12FP0CL80 117 aa13.43□□□□□ -0.26
SMAD3-201ENST00000327367 GAGE12GP0CL81 117 aa13.43□□□□□ -0.26
SMAD3-201ENST00000327367 GAGE12IP0CL82 117 aa13.43□□□□□ -0.26
SMAD3-201ENST00000327367 A0A087WX48 190 aa13.43□□□□□ -0.26
SMAD3-201ENST00000327367 PSPNO60542 156 aa13.43□□□□□ -0.26
SMAD3-201ENST00000327367 PFN1P07737 140 aaKnown RBP13.42□□□□□ -0.26
SMAD3-201ENST00000327367 NSUN5P1Q3KNT7 163 aa13.42□□□□□ -0.26
SMAD3-201ENST00000327367 FAM90A1Q86YD7 464 aa13.42□□□□□ -0.26
SMAD3-201ENST00000327367 A0A1B0GWJ7 208 aa13.42□□□□□ -0.26
SMAD3-201ENST00000327367 FOXG1P55316 489 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-201ENST00000327367 UNQ6494/PRO21346Q6UXR6 183 aa13.42□□□□□ -0.26
SMAD3-201ENST00000327367 Q6ZRM9 215 aa13.42□□□□□ -0.26
SMAD3-201ENST00000327367 LY96Q9Y6Y9 160 aa13.42□□□□□ -0.26
SMAD3-201ENST00000327367 TRAV25A0A0B4J276 109 aa13.42□□□□□ -0.26
SMAD3-201ENST00000327367 IGHV2-5P01817 119 aa13.42□□□□□ -0.26
SMAD3-201ENST00000327367 COX8AP10176 69 aa13.42□□□□□ -0.26
SMAD3-201ENST00000327367 HLA-DRB4P13762 266 aa13.42□□□□□ -0.26
SMAD3-201ENST00000327367 RPL35AP18077 110 aaKnown RBP13.42□□□□□ -0.26
SMAD3-201ENST00000327367 UBE2E2Q96LR5 201 aa13.42□□□□□ -0.26
SMAD3-201ENST00000327367 HLA-DRB4X5D2U9 266 aa13.42□□□□□ -0.26
SMAD3-201ENST00000327367 IGHV2-26A0A0B4J1V2 119 aa13.42□□□□□ -0.26
SMAD3-201ENST00000327367 SAP30O75446 220 aa13.42□□□□□ -0.26
SMAD3-201ENST00000327367 KNCNA6PVL3 124 aa13.41□□□□□ -0.26
SMAD3-201ENST00000327367 CDKN1BP46527 198 aa13.41□□□□□ -0.26
SMAD3-201ENST00000327367 TCTEX1D4Q5JR98 221 aa13.41□□□□□ -0.26
SMAD3-201ENST00000327367 RP1L1Q8IWN7 2480 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-201ENST00000327367 C5orf67F2Z3F1 127 aa13.4□□□□□ -0.26
SMAD3-201ENST00000327367 SH2D6Q7Z4S9 175 aa13.4□□□□□ -0.26
SMAD3-201ENST00000327367 K7EMI3 77 aa13.4□□□□□ -0.26
SMAD3-201ENST00000327367 LYL1P12980 280 aa13.4□□□□□ -0.26
SMAD3-201ENST00000327367 LY6G5BQ8NDX9 201 aa13.4□□□□□ -0.26
SMAD3-201ENST00000327367 ZC2HC1AQ96GY0 325 aa13.4□□□□□ -0.26
SMAD3-201ENST00000327367 ANKRD29Q8N6D5 301 aa13.4□□□□□ -0.26
SMAD3-201ENST00000327367 FAM168AQ92567 244 aa13.4□□□□□ -0.26
SMAD3-201ENST00000327367 LIME1Q9H400 295 aa13.4□□□□□ -0.26
SMAD3-201ENST00000327367 IGHV3-16A0A0C4DH30 117 aa13.4□□□□□ -0.27
SMAD3-201ENST00000327367 IGHV1-18A0A0C4DH31 117 aa13.4□□□□□ -0.27
SMAD3-201ENST00000327367 CD177Q8N6Q3 437 aa13.4□□□□□ -0.27
SMAD3-201ENST00000327367 TRGV9Q99603 122 aa13.4□□□□□ -0.27
SMAD3-201ENST00000327367 PSME4Q14997 1843 aa13.39□□□□□ -0.27
SMAD3-201ENST00000327367 DKK1O94907 266 aa13.39□□□□□ -0.27
SMAD3-201ENST00000327367 RPL36AP83881 106 aaKnown RBP13.39□□□□□ -0.27
SMAD3-201ENST00000327367 MRPL23Q16540 153 aaKnown RBP13.39□□□□□ -0.27
SMAD3-201ENST00000327367 NTN5Q8WTR8 489 aaPredicted RBP13.39□□□□□ -0.27
SMAD3-201ENST00000327367 RPL36ALQ969Q0 106 aaKnown RBP13.39□□□□□ -0.27
SMAD3-201ENST00000327367 TMEM200BQ69YZ2 307 aa13.39□□□□□ -0.27
SMAD3-201ENST00000327367 CACNA1IQ9P0X4 2223 aa13.39□□□□□ -0.27
SMAD3-201ENST00000327367 ATAD5Q96QE3 1844 aa13.39□□□□□ -0.27
SMAD3-201ENST00000327367 OR11H6Q8NGC7 330 aa13.39□□□□□ -0.27
SMAD3-201ENST00000327367 KLHDC3Q9BQ90 382 aa13.38□□□□□ -0.27
SMAD3-201ENST00000327367 PINLYPA6NC86 204 aa13.38□□□□□ -0.27
SMAD3-201ENST00000327367 C1orf162Q8NEQ5 155 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-201ENST00000327367 UBL5Q9BZL1 73 aa13.38□□□□□ -0.27
SMAD3-201ENST00000327367 HOXD3P31249 432 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-201ENST00000327367 ZNF318Q5VUA4 2279 aa13.38□□□□□ -0.27
SMAD3-201ENST00000327367 TRPM3Q9HCF6 1732 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-201ENST00000327367 MARF1Q9Y4F3 1742 aaKnown RBP13.38□□□□□ -0.27
SMAD3-201ENST00000327367 ZNF236Q9UL36 1845 aa13.38□□□□□ -0.27
SMAD3-201ENST00000327367 PAPPA2Q9BXP8 1791 aa13.37□□□□□ -0.27
SMAD3-201ENST00000327367 ESPL1Q14674 2120 aa13.37□□□□□ -0.27
SMAD3-201ENST00000327367 TRAV41A0A0B4J266 112 aa13.37□□□□□ -0.27
SMAD3-201ENST00000327367 INAFM2P0DMQ5 153 aa13.37□□□□□ -0.27
SMAD3-201ENST00000327367 CFHR3Q02985 330 aa13.37□□□□□ -0.27
SMAD3-201ENST00000327367 ZNRD1Q9P1U0 126 aa13.37□□□□□ -0.27
SMAD3-201ENST00000327367 NXPH4O95158 308 aa13.37□□□□□ -0.27
SMAD3-201ENST00000327367 ZNF726P1Q15940 193 aa13.37□□□□□ -0.27
SMAD3-201ENST00000327367 C20orf204Q6ZNR8 217 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms