RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 WIPF2Q8TF74 440 aaPredicted RBP14.51□□□□□ -0.09
EXOSC3-201ENST00000327304 Q8WTZ3 238 aa14.51□□□□□ -0.09
EXOSC3-201ENST00000327304 SLC25A39Q9BZJ4 359 aaPredicted RBP14.51□□□□□ -0.09
EXOSC3-201ENST00000327304 TMEM89A2RUT3 159 aa14.5□□□□□ -0.09
EXOSC3-201ENST00000327304 FAM223BA6NKX1 122 aa14.5□□□□□ -0.09
EXOSC3-201ENST00000327304 ADIRFQ15847 76 aa14.5□□□□□ -0.09
EXOSC3-201ENST00000327304 FAM223AQ8IWN6 122 aa14.5□□□□□ -0.09
EXOSC3-201ENST00000327304 RNF125Q96EQ8 232 aa14.5□□□□□ -0.09
EXOSC3-201ENST00000327304 GAR1Q9NY12 217 aaKnown RBP14.5□□□□□ -0.09
EXOSC3-201ENST00000327304 GGTLC3B5MD39 225 aa14.5□□□□□ -0.09
EXOSC3-201ENST00000327304 RPLP1P05386 114 aaKnown RBP14.5□□□□□ -0.09
EXOSC3-201ENST00000327304 ELANEP08246 267 aa14.5□□□□□ -0.09
EXOSC3-201ENST00000327304 ATP5G2Q06055 141 aa14.5□□□□□ -0.09
EXOSC3-201ENST00000327304 ZNF343Q6P1L6 599 aa14.5□□□□□ -0.09
EXOSC3-201ENST00000327304 ZNF502Q8TBZ5 544 aa14.5□□□□□ -0.09
EXOSC3-201ENST00000327304 ISOC2Q96AB3 205 aa14.5□□□□□ -0.09
EXOSC3-201ENST00000327304 TCEAL7Q9BRU2 100 aa14.5□□□□□ -0.09
EXOSC3-201ENST00000327304 TMEM14CQ9P0S9 112 aa14.5□□□□□ -0.09
EXOSC3-201ENST00000327304 CLPSL1A2RUU4 121 aa14.49□□□□□ -0.09
EXOSC3-201ENST00000327304 MT-ND4LP03901 98 aa14.49□□□□□ -0.09
EXOSC3-201ENST00000327304 GP9P14770 177 aa14.49□□□□□ -0.09
EXOSC3-201ENST00000327304 SUMO1P63165 101 aaKnown RBP14.49□□□□□ -0.09
EXOSC3-201ENST00000327304 PRIMA1Q86XR5 153 aa14.49□□□□□ -0.09
EXOSC3-201ENST00000327304 RNF152Q8N8N0 203 aa14.49□□□□□ -0.09
EXOSC3-201ENST00000327304 DERL1Q9BUN8 251 aa14.49□□□□□ -0.09
EXOSC3-201ENST00000327304 RNF114Q9Y508 228 aa14.49□□□□□ -0.09
EXOSC3-201ENST00000327304 IL4P05112 153 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 CTSGP08311 255 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 TCTEX1D4Q5JR98 221 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 CCDC140Q96MF4 163 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 YPEL4Q96NS1 127 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 ATP6V0BQ99437 205 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 SHANK2-AS3Q9BTD1 123 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 ATRQ13535 2644 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 C9JCJ5 164 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 H3BRN7 92 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 HAX1O00165 279 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 IGHV3-11P01762 117 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 PROK1P58294 105 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 RNF212Q495C1 297 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 HIST2H2BDQ6DRA6 164 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 LINC01551Q86U37 167 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 MYOZ3Q8TDC0 251 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 HIST1H2BAQ96A08 127 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 EEF1AKMT3Q96AZ1 226 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 USMG5Q96IX5 58 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 LY96Q9Y6Y9 160 aa14.48□□□□□ -0.09
EXOSC3-201ENST00000327304 TRBV7-1A0A0A6YYK4 115 aa14.47□□□□□ -0.09
EXOSC3-201ENST00000327304 OR2T8A6NH00 312 aa14.47□□□□□ -0.09
EXOSC3-201ENST00000327304 NBEAP1P0C6P0 100 aa14.47□□□□□ -0.09
EXOSC3-201ENST00000327304 FOLR2P14207 255 aa14.46□□□□□ -0.09
EXOSC3-201ENST00000327304 ATF4P18848 351 aaPredicted RBP14.46□□□□□ -0.09
EXOSC3-201ENST00000327304 CRYBB3P26998 211 aa14.46□□□□□ -0.09
EXOSC3-201ENST00000327304 MYCNOSP40205 109 aa14.46□□□□□ -0.09
EXOSC3-201ENST00000327304 FAM24BQ8N5W8 94 aa14.46□□□□□ -0.09
EXOSC3-201ENST00000327304 ANAPC16Q96DE5 110 aa14.46□□□□□ -0.09
EXOSC3-201ENST00000327304 RNF24Q9Y225 148 aa14.46□□□□□ -0.09
EXOSC3-201ENST00000327304 TRBV20OR9-2A0A075B6H5 130 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 A0A0G2JLM5 398 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 OR4X2Q8NGF9 303 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 C2CD4CQ8TF44 421 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 TMEM190Q8WZ59 177 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 OR5B12Q96R08 314 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 ELOVL1Q9BW60 279 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 HELTA6NFD8 242 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 HIST1H1EP10412 219 aaKnown RBP14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 S100A7P31151 101 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 GPR183P32249 361 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 RPL35P42766 123 aaKnown RBP14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 USF2Q15853 346 aaPredicted RBP14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 LEMD1Q68G75 181 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 CLEC19AQ6UXS0 136 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 ZNF600Q6ZNG1 722 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 BPIFA4PQ86YQ2 179 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 C11orf44Q8N8P7 122 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 GNB4Q9HAV0 340 aa14.45□□□□□ -0.1
EXOSC3-201ENST00000327304 CD28P10747 220 aa14.44□□□□□ -0.1
EXOSC3-201ENST00000327304 ADMP35318 185 aa14.44□□□□□ -0.1
EXOSC3-201ENST00000327304 ELOBQ15370 118 aa14.44□□□□□ -0.1
EXOSC3-201ENST00000327304 CHRDL1Q9BU40 450 aa14.44□□□□□ -0.1
EXOSC3-201ENST00000327304 TRBV12-3P01733 135 aa14.43□□□□□ -0.1
EXOSC3-201ENST00000327304 CLEC3BP05452 202 aa14.43□□□□□ -0.1
EXOSC3-201ENST00000327304 KRTAP24-1Q3LI83 254 aa14.43□□□□□ -0.1
EXOSC3-201ENST00000327304 ZNF98A6NK75 572 aa14.43□□□□□ -0.1
EXOSC3-201ENST00000327304 RANP62826 216 aaKnown RBP14.43□□□□□ -0.1
EXOSC3-201ENST00000327304 C18orf65Q6ZTR6 163 aa14.43□□□□□ -0.1
EXOSC3-201ENST00000327304 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.42□□□□□ -0.1
EXOSC3-201ENST00000327304 PPP5D1E7EU14 171 aa14.42□□□□□ -0.1
EXOSC3-201ENST00000327304 PPP1R2P9O14990 202 aa14.42□□□□□ -0.1
EXOSC3-201ENST00000327304 RAB5AP20339 215 aa14.42□□□□□ -0.1
EXOSC3-201ENST00000327304 TAS2R60P59551 318 aa14.42□□□□□ -0.1
EXOSC3-201ENST00000327304 KRTAP10-3P60369 221 aa14.42□□□□□ -0.1
EXOSC3-201ENST00000327304 KHDC1LQ5JSQ8 128 aa14.42□□□□□ -0.1
EXOSC3-201ENST00000327304 OCC1Q8TAD7 63 aa14.42□□□□□ -0.1
EXOSC3-201ENST00000327304 BLNKQ8WV28 456 aa14.42□□□□□ -0.1
EXOSC3-201ENST00000327304 UBE2E2Q96LR5 201 aa14.42□□□□□ -0.1
EXOSC3-201ENST00000327304 A0A1B0GUS0 222 aa14.41□□□□□ -0.1
EXOSC3-201ENST00000327304 H7BYZ3 331 aa14.41□□□□□ -0.1
EXOSC3-201ENST00000327304 BMPR1BO00238 502 aa14.41□□□□□ -0.1
EXOSC3-201ENST00000327304 OR4F17Q8NGA8 305 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms