RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 ZNF586Q9NXT0 402 aa10.48□□□□□ -0.73
LIN28A-202ENST00000326279 M0R3E3 92 aa10.48□□□□□ -0.73
LIN28A-202ENST00000326279 MAS1LP35410 378 aa10.48□□□□□ -0.73
LIN28A-202ENST00000326279 ZNF738Q8NE65 137 aa10.48□□□□□ -0.73
LIN28A-202ENST00000326279 DDB2Q92466 427 aa10.48□□□□□ -0.73
LIN28A-202ENST00000326279 EEF1AKMT3Q96AZ1 226 aa10.48□□□□□ -0.73
LIN28A-202ENST00000326279 MOB4Q9Y3A3 225 aa10.48□□□□□ -0.73
LIN28A-202ENST00000326279 CXorf65A6NEN9 183 aa10.47□□□□□ -0.73
LIN28A-202ENST00000326279 A8MWL6 223 aa10.47□□□□□ -0.73
LIN28A-202ENST00000326279 CGB3P0DN86 165 aa10.47□□□□□ -0.73
LIN28A-202ENST00000326279 CGB7P0DN87 165 aa10.47□□□□□ -0.73
LIN28A-202ENST00000326279 DEFA6Q01524 100 aa10.47□□□□□ -0.73
LIN28A-202ENST00000326279 MINOS1Q5TGZ0 78 aa10.47□□□□□ -0.73
LIN28A-202ENST00000326279 MRPL18Q9H0U6 180 aaKnown RBP10.47□□□□□ -0.73
LIN28A-202ENST00000326279 MINOS1-NBL1R4GNA1 71 aa10.47□□□□□ -0.73
LIN28A-202ENST00000326279 CRYBG3Q68DQ2 2970 aa10.47□□□□□ -0.73
LIN28A-202ENST00000326279 HLA-DRB1P01911 266 aa10.47□□□□□ -0.73
LIN28A-202ENST00000326279 RELQ04864 619 aaPredicted RBP10.47□□□□□ -0.73
LIN28A-202ENST00000326279 ZNF841Q6ZN19 808 aa10.47□□□□□ -0.73
LIN28A-202ENST00000326279 LINC01551Q86U37 167 aa10.47□□□□□ -0.73
LIN28A-202ENST00000326279 PRSS22Q9GZN4 317 aa10.47□□□□□ -0.73
LIN28A-202ENST00000326279 IGHV3OR16-12A0A075B7B8 117 aa10.47□□□□□ -0.73
LIN28A-202ENST00000326279 SMR3AQ99954 134 aa10.47□□□□□ -0.73
LIN28A-202ENST00000326279 UTP20O75691 2785 aaKnown RBP10.47□□□□□ -0.73
LIN28A-202ENST00000326279 ITPR1Q14643 2758 aa10.46□□□□□ -0.73
LIN28A-202ENST00000326279 MGAM2Q2M2H8 2515 aa10.46□□□□□ -0.73
LIN28A-202ENST00000326279 ZNF295-AS1Q8N0V1 137 aa10.46□□□□□ -0.73
LIN28A-202ENST00000326279 DYNAPQ8N1N2 210 aa10.46□□□□□ -0.73
LIN28A-202ENST00000326279 PRSS3P2Q8NHM4 247 aa10.46□□□□□ -0.73
LIN28A-202ENST00000326279 A0A1B0GWJ7 208 aa10.46□□□□□ -0.73
LIN28A-202ENST00000326279 APCSP02743 223 aa10.46□□□□□ -0.73
LIN28A-202ENST00000326279 GLMPQ8WWB7 406 aa10.46□□□□□ -0.73
LIN28A-202ENST00000326279 LOC389332A0A1B0GUA5 103 aa10.46□□□□□ -0.74
LIN28A-202ENST00000326279 LINC00311Q8N616 119 aa10.46□□□□□ -0.74
LIN28A-202ENST00000326279 TMEM208Q9BTX3 173 aa10.46□□□□□ -0.74
LIN28A-202ENST00000326279 C11orf71Q6IPW1 123 aa10.45□□□□□ -0.74
LIN28A-202ENST00000326279 TCF24Q7RTU0 167 aa10.45□□□□□ -0.74
LIN28A-202ENST00000326279 PIP4P2Q8N4L2 257 aa10.45□□□□□ -0.74
LIN28A-202ENST00000326279 SLC25A39Q9BZJ4 359 aaPredicted RBP10.45□□□□□ -0.74
LIN28A-202ENST00000326279 FAM181BA6NEQ2 426 aa10.45□□□□□ -0.74
LIN28A-202ENST00000326279 HSBP1L1C9JCN9 74 aa10.45□□□□□ -0.74
LIN28A-202ENST00000326279 ISLRO14498 428 aa10.45□□□□□ -0.74
LIN28A-202ENST00000326279 GFI1BQ5VTD9 330 aa10.45□□□□□ -0.74
LIN28A-202ENST00000326279 NDUFB8O95169 186 aa10.45□□□□□ -0.74
LIN28A-202ENST00000326279 SRIP30626 198 aa10.45□□□□□ -0.74
LIN28A-202ENST00000326279 TMEM78Q5T7P6 136 aa10.45□□□□□ -0.74
LIN28A-202ENST00000326279 WDR73Q6P4I2 378 aa10.45□□□□□ -0.74
LIN28A-202ENST00000326279 UNC79Q9P2D8 2635 aa10.45□□□□□ -0.74
LIN28A-202ENST00000326279 EPDR1Q9UM22 224 aa10.45□□□□□ -0.74
LIN28A-202ENST00000326279 GZMBP10144 247 aa10.44□□□□□ -0.74
LIN28A-202ENST00000326279 TEX38Q6PEX7 206 aa10.44□□□□□ -0.74
LIN28A-202ENST00000326279 C8orf46Q8TAG6 207 aa10.44□□□□□ -0.74
LIN28A-202ENST00000326279 A0A1W2PRE2 83 aa10.44□□□□□ -0.74
LIN28A-202ENST00000326279 ZNF562Q6V9R5 426 aa10.44□□□□□ -0.74
LIN28A-202ENST00000326279 SSBP4Q9BWG4 385 aaPredicted RBP10.44□□□□□ -0.74
LIN28A-202ENST00000326279 ITPR2Q14571 2701 aa10.44□□□□□ -0.74
LIN28A-202ENST00000326279 F5H697 171 aa10.44□□□□□ -0.74
LIN28A-202ENST00000326279 CD33P20138 364 aa10.44□□□□□ -0.74
LIN28A-202ENST00000326279 TM4SF20Q53R12 229 aa10.44□□□□□ -0.74
LIN28A-202ENST00000326279 FA2HQ7L5A8 372 aa10.44□□□□□ -0.74
LIN28A-202ENST00000326279 ZNF114Q8NC26 417 aa10.44□□□□□ -0.74
LIN28A-202ENST00000326279 TCTAP57738 103 aa10.43□□□□□ -0.74
LIN28A-202ENST00000326279 TXN2Q99757 166 aa10.43□□□□□ -0.74
LIN28A-202ENST00000326279 TMEM189A5PLL7 270 aa10.43□□□□□ -0.74
LIN28A-202ENST00000326279 PF4P02776 101 aa10.43□□□□□ -0.74
LIN28A-202ENST00000326279 MRPL36Q9P0J6 103 aaKnown RBP10.43□□□□□ -0.74
LIN28A-202ENST00000326279 IGKV1OR2-108A0A075B7D4 117 aa10.43□□□□□ -0.74
LIN28A-202ENST00000326279 A0A087WWC5 75 aa10.43□□□□□ -0.74
LIN28A-202ENST00000326279 IGLC7A0M8Q6 106 aa10.43□□□□□ -0.74
LIN28A-202ENST00000326279 PPIFP30405 207 aaKnown RBP10.43□□□□□ -0.74
LIN28A-202ENST00000326279 POU2AF1Q16633 256 aa10.43□□□□□ -0.74
LIN28A-202ENST00000326279 FAM106AQ4KMX7 169 aa10.43□□□□□ -0.74
LIN28A-202ENST00000326279 RBPMS2Q6ZRY4 209 aaKnown RBP10.43□□□□□ -0.74
LIN28A-202ENST00000326279 GPR82Q96P67 336 aa10.43□□□□□ -0.74
LIN28A-202ENST00000326279 ARL2-SNX15V9GYD0 113 aa10.43□□□□□ -0.74
LIN28A-202ENST00000326279 LINC01548A6NM66 108 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 HIST1H2BKO60814 126 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 HIST1H2BJP06899 126 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 HIST1H2BOP23527 126 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 HIST1H2BBP33778 126 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 HIST1H2BDP58876 126 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 HIST1H2BCP62807 126 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 HIST2H2BEQ16778 126 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.42□□□□□ -0.74
LIN28A-202ENST00000326279 MORN5Q5VZ52 161 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 CIARTQ8N365 385 aaPredicted RBP10.42□□□□□ -0.74
LIN28A-202ENST00000326279 HIST1H2BHQ93079 126 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 HIST1H2BNQ99877 126 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 HIST1H2BMQ99879 126 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 SMG1Q96Q15 3661 aaKnown RBP10.42□□□□□ -0.74
LIN28A-202ENST00000326279 HIGD1CA8MV81 97 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 IGLV1-47P01700 117 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 FAM71F2Q6NXP2 309 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 PSMB11A5LHX3 300 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 HIST1H1AQ02539 215 aaPredicted RBP10.42□□□□□ -0.74
LIN28A-202ENST00000326279 HSPB9Q9BQS6 159 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 C11orf1Q9H5F2 150 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 TUBA4BQ9H853 241 aa10.42□□□□□ -0.74
LIN28A-202ENST00000326279 TBL2Q9Y4P3 447 aaKnown RBP10.42□□□□□ -0.74
LIN28A-202ENST00000326279 SCGB2A2Q13296 93 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms