RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 IGHV1-18A0A0C4DH31 117 aa10.41□□□□□ -0.74
FN1-201ENST00000323926 IGKV3-20P01619 116 aa10.41□□□□□ -0.74
FN1-201ENST00000323926 CRYGSP22914 178 aa10.41□□□□□ -0.74
FN1-201ENST00000323926 C1QL2Q7Z5L3 287 aa10.41□□□□□ -0.74
FN1-201ENST00000323926 ORAOV1Q8WV07 137 aa10.41□□□□□ -0.74
FN1-201ENST00000323926 LHFPL1Q86WI0 220 aa10.4□□□□□ -0.74
FN1-201ENST00000323926 UBE2DNLQ8IWF7 75 aa10.4□□□□□ -0.74
FN1-201ENST00000323926 FGF16O43320 207 aa10.4□□□□□ -0.74
FN1-201ENST00000323926 GATA4P43694 442 aa10.4□□□□□ -0.74
FN1-201ENST00000323926 TMEM141Q96I45 108 aa10.4□□□□□ -0.74
FN1-201ENST00000323926 CHCHD5Q9BSY4 110 aa10.4□□□□□ -0.74
FN1-201ENST00000323926 PSG3Q16557 428 aa10.4□□□□□ -0.74
FN1-201ENST00000323926 RNF222A6NCQ9 220 aa10.4□□□□□ -0.74
FN1-201ENST00000323926 TPTE2P1Q5T6R2 138 aa10.4□□□□□ -0.74
FN1-201ENST00000323926 C17orf82Q86X59 251 aaPredicted RBP10.4□□□□□ -0.74
FN1-201ENST00000323926 RNF126Q9BV68 326 aa10.4□□□□□ -0.74
FN1-201ENST00000323926 NEUROG3Q9Y4Z2 214 aa10.4□□□□□ -0.74
FN1-201ENST00000323926 FOXA3P55318 350 aaPredicted RBP10.4□□□□□ -0.75
FN1-201ENST00000323926 BUB1B-PAK6H3BSN5 160 aa10.4□□□□□ -0.75
FN1-201ENST00000323926 SERF1AO75920 110 aa10.4□□□□□ -0.75
FN1-201ENST00000323926 CEACAM8P31997 349 aaPredicted RBP10.4□□□□□ -0.75
FN1-201ENST00000323926 TEX48A0A1B0GUV7 120 aa10.39□□□□□ -0.75
FN1-201ENST00000323926 RCHY1Q96PM5 261 aa10.39□□□□□ -0.75
FN1-201ENST00000323926 TNFRSF6BO95407 300 aa10.39□□□□□ -0.75
FN1-201ENST00000323926 SAMD5Q5TGI4 173 aa10.39□□□□□ -0.75
FN1-201ENST00000323926 NRTNQ99748 197 aa10.39□□□□□ -0.75
FN1-201ENST00000323926 TMEM14EPQ6UXP3 125 aa10.39□□□□□ -0.75
FN1-201ENST00000323926 GGNQ86UU5 652 aa10.39□□□□□ -0.75
FN1-201ENST00000323926 GGTLC1Q9BX51 225 aa10.39□□□□□ -0.75
FN1-201ENST00000323926 TDGF1P3P51864 188 aa10.39□□□□□ -0.75
FN1-201ENST00000323926 DMRTA2Q96SC8 542 aa10.39□□□□□ -0.75
FN1-201ENST00000323926 IGHV1-3A0A0C4DH29 117 aa10.39□□□□□ -0.75
FN1-201ENST00000323926 TIMM23O14925 209 aa10.39□□□□□ -0.75
FN1-201ENST00000323926 SPRED2Q7Z698 418 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 RNASE7Q9H1E1 156 aaKnown RBP10.38□□□□□ -0.75
FN1-201ENST00000323926 IGHV1-46P01743 117 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 NOTCH2Q04721 2471 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 E9PQ18 207 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 TRPT1Q86TN4 253 aaKnown RBP10.38□□□□□ -0.75
FN1-201ENST00000323926 HIST1H2BKO60814 126 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 HIST1H2BJP06899 126 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 LYL1P12980 280 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 HIST1H2BOP23527 126 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 HIST1H2BBP33778 126 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 HIST1H2BDP58876 126 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 HIST1H2BCP62807 126 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 HIST2H2BEQ16778 126 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.38□□□□□ -0.75
FN1-201ENST00000323926 HIST1H2BHQ93079 126 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 HIST1H2BNQ99877 126 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 HIST1H2BMQ99879 126 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 SPRR3Q9UBC9 169 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 OTX1P32242 354 aaPredicted RBP10.38□□□□□ -0.75
FN1-201ENST00000323926 KLF17Q5JT82 389 aaPredicted RBP10.38□□□□□ -0.75
FN1-201ENST00000323926 C14orf144Q96I85 54 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 PROB1E7EW31 1015 aa10.38□□□□□ -0.75
FN1-201ENST00000323926 TREML4Q6UXN2 200 aa10.37□□□□□ -0.75
FN1-201ENST00000323926 GSN-AS1Q9NRJ2 163 aa10.37□□□□□ -0.75
FN1-201ENST00000323926 TRAV40A0A0B4J280 105 aa10.37□□□□□ -0.75
FN1-201ENST00000323926 CD33P20138 364 aa10.37□□□□□ -0.75
FN1-201ENST00000323926 ZNF672Q499Z4 452 aaPredicted RBP10.37□□□□□ -0.75
FN1-201ENST00000323926 LOC102724200A0A096LPH7 203 aaPredicted RBP10.37□□□□□ -0.75
FN1-201ENST00000323926 ATOH7Q8N100 152 aa10.37□□□□□ -0.75
FN1-201ENST00000323926 CELA3BP08861 270 aa10.37□□□□□ -0.75
FN1-201ENST00000323926 SH2D6Q7Z4S9 175 aa10.37□□□□□ -0.75
FN1-201ENST00000323926 NMSQ5H8A3 153 aa10.37□□□□□ -0.75
FN1-201ENST00000323926 H0YJW9 148 aa10.36□□□□□ -0.75
FN1-201ENST00000323926 PSCAO43653 123 aa10.36□□□□□ -0.75
FN1-201ENST00000323926 PSG1P11464 419 aa10.36□□□□□ -0.75
FN1-201ENST00000323926 ACTL10Q5JWF8 245 aa10.36□□□□□ -0.75
FN1-201ENST00000323926 SMAD7O15105 426 aaKnown RBP10.36□□□□□ -0.75
FN1-201ENST00000323926 TMEM200BQ69YZ2 307 aa10.36□□□□□ -0.75
FN1-201ENST00000323926 LY6G5BQ8NDX9 201 aa10.36□□□□□ -0.75
FN1-201ENST00000323926 ANAPC13Q9BS18 74 aa10.36□□□□□ -0.75
FN1-201ENST00000323926 H3BUA1 57 aa10.36□□□□□ -0.75
FN1-201ENST00000323926 GAGE2BQ13066 116 aa10.36□□□□□ -0.75
FN1-201ENST00000323926 GAGE2EQ4V326 116 aa10.36□□□□□ -0.75
FN1-201ENST00000323926 ZNF479Q96JC4 524 aa10.36□□□□□ -0.75
FN1-201ENST00000323926 GAGE2DQ9UEU5 116 aa10.36□□□□□ -0.75
FN1-201ENST00000323926 SIGLEC9Q9Y336 463 aa10.36□□□□□ -0.75
FN1-201ENST00000323926 EPOPA6NHQ4 379 aa10.36□□□□□ -0.75
FN1-201ENST00000323926 FLVCR1-AS1Q8TAF5 88 aa10.36□□□□□ -0.75
FN1-201ENST00000323926 ATP5G3P48201 142 aa10.35□□□□□ -0.75
FN1-201ENST00000323926 A0A0G2JMM0 328 aa10.35□□□□□ -0.75
FN1-201ENST00000323926 A0A1W2PPB8 328 aa10.35□□□□□ -0.75
FN1-201ENST00000323926 A0A1W2PRS3 328 aa10.35□□□□□ -0.75
FN1-201ENST00000323926 SRRM4A7MD48 611 aaKnown RBP10.35□□□□□ -0.75
FN1-201ENST00000323926 KIR3DP1A8MWS1 328 aa10.35□□□□□ -0.75
FN1-201ENST00000323926 LINC00158P58513 81 aa10.35□□□□□ -0.75
FN1-201ENST00000323926 WFDC6Q9BQY6 131 aa10.35□□□□□ -0.75
FN1-201ENST00000323926 LTBRP36941 435 aa10.35□□□□□ -0.75
FN1-201ENST00000323926 ZNF474Q6S9Z5 364 aaPredicted RBP10.35□□□□□ -0.75
FN1-201ENST00000323926 ADMP35318 185 aa10.35□□□□□ -0.75
FN1-201ENST00000323926 ZNF562Q6V9R5 426 aa10.35□□□□□ -0.75
FN1-201ENST00000323926 AKIRIN1Q9H9L7 192 aaPredicted RBP10.35□□□□□ -0.75
FN1-201ENST00000323926 TMEM14BQ9NUH8 114 aa10.35□□□□□ -0.75
FN1-201ENST00000323926 IGHV3-48P01763 117 aa10.35□□□□□ -0.75
FN1-201ENST00000323926 IGFL3Q6UXB1 125 aa10.35□□□□□ -0.75
FN1-201ENST00000323926 IGHG3P01860 377 aa10.34□□□□□ -0.75
FN1-201ENST00000323926 YPEL3P61236 119 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms