RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 C8orf46Q8TAG6 207 aa5.84□□□□□ -1.48
SMC1A-201ENST00000322213 RCHY1Q96PM5 261 aa5.84□□□□□ -1.48
SMC1A-201ENST00000322213 PNRC2Q9NPJ4 139 aaKnown RBP5.84□□□□□ -1.48
SMC1A-201ENST00000322213 H3BTX0 84 aa5.84□□□□□ -1.48
SMC1A-201ENST00000322213 LGALS1P09382 135 aaKnown RBP5.84□□□□□ -1.48
SMC1A-201ENST00000322213 C5orf47Q569G3 176 aa5.84□□□□□ -1.48
SMC1A-201ENST00000322213 HAPLN4Q86UW8 402 aa5.84□□□□□ -1.48
SMC1A-201ENST00000322213 ZNF319Q9P2F9 582 aa5.84□□□□□ -1.48
SMC1A-201ENST00000322213 IGKV1-27A0A075B6S5 117 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 CGB1A6NKQ9 187 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 CDCP2Q5VXM1 449 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 IGHV3-48P01763 117 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 HERV-K104P63124 156 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 KLF5Q13887 457 aaPredicted RBP5.83□□□□□ -1.48
SMC1A-201ENST00000322213 CHCHD2Q9Y6H1 151 aaPredicted RBP5.83□□□□□ -1.48
SMC1A-201ENST00000322213 IGLV3-32A0A0A0MS00 114 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 IGKV1-5P01602 117 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 PAX1P15863 534 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 LIME1Q9H400 295 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 C21orf140B9A014 251 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 ZNF826PQ6ZT77 177 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 MBNL3Q9NUK0 354 aaKnown RBP5.83□□□□□ -1.48
SMC1A-201ENST00000322213 ZNF329Q86UD4 541 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 GTSCR1Q86UQ5 136 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 C2CD4DB7Z1M9 353 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 H0YJW9 148 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 SAP30O75446 220 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 IGLC1P0CG04 106 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 MNX1P50219 401 aaPredicted RBP5.83□□□□□ -1.48
SMC1A-201ENST00000322213 TMEM92Q6UXU6 159 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 LEAP2Q969E1 77 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 ZIC3O60481 467 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 ZNF501Q96CX3 271 aaPredicted RBP5.83□□□□□ -1.48
SMC1A-201ENST00000322213 TRAV12-3A0A0B4J271 114 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 TRAV17A0A0B4J275 112 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 PMVKQ15126 192 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 TMEM75Q8N9X5 138 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 TTTY12Q9BZ98 90 aa5.83□□□□□ -1.48
SMC1A-201ENST00000322213 F2RL2O00254 374 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 MORN3Q6PF18 240 aaPredicted RBP5.82□□□□□ -1.48
SMC1A-201ENST00000322213 VGLL1Q99990 258 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 SCRT2Q9NQ03 307 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 PYYP10082 97 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 KLRD1Q13241 179 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 COL9A1P20849 921 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 FAM74A4Q5TZK3 123 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 WFDC12Q8WWY7 111 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 RAX2Q96IS3 184 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 TRGV9Q99603 122 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 MAP1AP78559 2803 aaPredicted RBP5.82□□□□□ -1.48
SMC1A-201ENST00000322213 M0R381 172 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 C1orf122Q6ZSJ8 110 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 CYYR1Q96J86 154 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 SPAG8Q99932 426 aaPredicted RBP5.82□□□□□ -1.48
SMC1A-201ENST00000322213 MOB4Q9Y3A3 225 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 PLAURQ03405 335 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 C3AR1Q16581 482 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 Q6ZVH6 145 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 PPP1R32Q7Z5V6 425 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 MTORP42345 2549 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 CRISPLD2Q9H0B8 497 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 H3BMG7 143 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 HAX1O00165 279 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 AGFG2O95081 481 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 NXPH1P58417 271 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 FHL1Q13642 323 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 S100A7L2Q5SY68 101 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 CT55Q8WUE5 264 aa5.82□□□□□ -1.48
SMC1A-201ENST00000322213 SAA1P0DJI8 122 aaPredicted RBP5.81□□□□□ -1.48
SMC1A-201ENST00000322213 SUMO2P61956 95 aaKnown RBP5.81□□□□□ -1.48
SMC1A-201ENST00000322213 PEAR1Q5VY43 1037 aaPredicted RBP5.81□□□□□ -1.48
SMC1A-201ENST00000322213 OR13A1Q8NGR1 328 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 IGKV3D-11A0A0A0MRZ8 115 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 IGHV1OR15-9A0A0B4J2B8 117 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 IGHG4P01861 327 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 CSRP2Q16527 193 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 PVRIGQ6DKI7 326 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 PRSS57Q6UWY2 283 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 FAM159AQ6UWV7 190 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 C15orf62A8K5M9 175 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 TRACP01848 142 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 CELA3AP09093 270 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 TMEM240Q5SV17 173 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 CCL13Q99616 98 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 NPIPB5A8MRT5 1133 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 TGFBR3LH3BV60 316 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 FAM106CPP0CH98 169 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 TAL2Q16559 108 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 OR11H6Q8NGC7 330 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 FABP5P3A8MUU1 101 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 GATA2P23769 480 aaPredicted RBP5.81□□□□□ -1.48
SMC1A-201ENST00000322213 FAM231DQ6ZW35 169 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 PYGO2Q9BRQ0 406 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 C9JAW5 83 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 K7ERJ3 54 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 HTN1P15515 57 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 LGALS9BQ3B8N2 356 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 KHDC1LQ5JSQ8 128 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 LGALS9CQ6DKI2 356 aa5.81□□□□□ -1.48
SMC1A-201ENST00000322213 YPEL4Q96NS1 127 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms