RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 TMEM68Q96MH6 324 aa5.94□□□□□ -1.46
IFT88-201ENST00000319980 C17orf77Q96MU5 243 aa5.94□□□□□ -1.46
IFT88-201ENST00000319980 HIST1H2BLQ99880 126 aa5.94□□□□□ -1.46
IFT88-201ENST00000319980 ATG101Q9BSB4 218 aa5.94□□□□□ -1.46
IFT88-201ENST00000319980 SHANK2-AS3Q9BTD1 123 aa5.94□□□□□ -1.46
IFT88-201ENST00000319980 FBXL7Q9UJT9 491 aa5.94□□□□□ -1.46
IFT88-201ENST00000319980 CELSR2Q9HCU4 2923 aa5.94□□□□□ -1.46
IFT88-201ENST00000319980 ZFHX3Q15911 3703 aa5.94□□□□□ -1.46
IFT88-201ENST00000319980 LRRK2Q5S007 2527 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 TRAV40A0A0B4J280 105 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 IGHV3-35A0A0C4DH35 117 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 LINC01548A6NM66 108 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 ATP6V0E1O15342 81 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 TCRAP04437 139 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 PRB4P10163 310 aaPredicted RBP5.93□□□□□ -1.46
IFT88-201ENST00000319980 YPEL3P61236 119 aaPredicted RBP5.93□□□□□ -1.46
IFT88-201ENST00000319980 TMEM219Q86XT9 240 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 CMTM2Q8TAZ6 248 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 TMEM14CQ9P0S9 112 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 TRAV9-1A0A075B6T8 112 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 TRAV8-1A0A0A6YYK1 113 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 G3V318 75 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 TNFRSF6BO95407 300 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 OR4F17Q8NGA8 305 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 PACRGQ96M98 296 aaPredicted RBP5.93□□□□□ -1.46
IFT88-201ENST00000319980 GPR82Q96P67 336 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 KLF12Q9Y4X4 402 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 IGHV3OR16-8A0A075B7F1 116 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 WI2-2373I1.2A0A1W2PRP0 233 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 SNURFLB1AK76 121 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 H3BRN7 92 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 NDUFS8O00217 210 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 CTSGP08311 255 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 ADMP35318 185 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 C15orf32Q32M92 178 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 COA6Q5JTJ3 125 aaKnown RBP5.93□□□□□ -1.46
IFT88-201ENST00000319980 NUDT10Q8NFP7 164 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 NUDT11Q96G61 164 aa5.93□□□□□ -1.46
IFT88-201ENST00000319980 HELZ2Q9BYK8 2649 aaKnown RBP5.92□□□□□ -1.46
IFT88-201ENST00000319980 TRBV19A0A075B6N1 114 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 IGHV1-69DA0A0B4J2H0 117 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 A0A1B0GUS0 222 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 GRIFINA4D1Z8 144 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 VWC2LB2RUY7 222 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 IGHV1-69P01742 117 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 MRPL54Q6P161 138 aaKnown RBP5.92□□□□□ -1.46
IFT88-201ENST00000319980 CHRDL1Q9BU40 450 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 MRPL18Q9H0U6 180 aaKnown RBP5.92□□□□□ -1.46
IFT88-201ENST00000319980 OTORQ9NRC9 128 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 CENPEQ02224 2701 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 GATCO43716 136 aaKnown RBP5.92□□□□□ -1.46
IFT88-201ENST00000319980 IGLC2P0DOY2 106 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 IGHV4-38-2P0DP08 117 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 RAB4BP61018 213 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 GOLT1AQ6ZVE7 132 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 FMC1Q96HJ9 113 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 ZNF48Q96MX3 618 aaPredicted RBP5.92□□□□□ -1.46
IFT88-201ENST00000319980 MS4A10Q96PG2 267 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 C7orf69Q9H7B7 122 aa5.92□□□□□ -1.46
IFT88-201ENST00000319980 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.91□□□□□ -1.462e-6■■■□□ 19
IFT88-201ENST00000319980 USP9YO00507 2555 aaPredicted RBP5.91□□□□□ -1.46
IFT88-201ENST00000319980 SMIM27A0A1W2PRY6 76 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 AMBPP02760 352 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 CLEC3BP05452 202 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 GPR183P32249 361 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 RHOGP84095 191 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 RPL19P84098 196 aaKnown RBP5.91□□□□□ -1.46
IFT88-201ENST00000319980 CDPF1Q6NVV7 123 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 C5orf56Q8N8D9 126 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 FAM110DQ8TAY7 271 aaPredicted RBP5.91□□□□□ -1.46
IFT88-201ENST00000319980 MLST8Q9BVC4 326 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 NAT8BQ9UHF3 227 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 RNF24Q9Y225 148 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 SOX21Q9Y651 276 aaPredicted RBP5.91□□□□□ -1.46
IFT88-201ENST00000319980 ABCA2Q9BZC7 2435 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 POLQO75417 2590 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 A1L4Q6 167 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 LINC00322Q6ZN03 302 aaPredicted RBP5.91□□□□□ -1.46
IFT88-201ENST00000319980 FAM231DQ6ZW35 169 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 S100A7AQ86SG5 101 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 TMEM256Q8N2U0 113 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 PGPEP1Q9NXJ5 209 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 LINC00527Q9UJ94 153 aa5.91□□□□□ -1.46
IFT88-201ENST00000319980 M0R3E3 92 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 MRPS12O15235 138 aaKnown RBP5.9□□□□□ -1.46
IFT88-201ENST00000319980 SCGB2A1O75556 95 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 LTAP01374 205 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 AMY1AP04745 511 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 MSMBP08118 114 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 BTF3P20290 206 aaKnown RBP5.9□□□□□ -1.46
IFT88-201ENST00000319980 SIGLEC15Q6ZMC9 328 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 PRNTQ86SH4 94 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 PIFOQ8TCI5 191 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 ZNF414Q96IQ9 312 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 GNB1LQ9BYB4 327 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 GSN-AS1Q9NRJ2 163 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 TMEM160Q9NX00 188 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 MAJINQ3KP22 176 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 C9orf152Q5JTZ5 239 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 CIARTQ8N365 385 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms