RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 CCL19Q99731 98 aa12.66□□□□□ -0.38
USH1C-202ENST00000318024 PAXXQ9BUH6 204 aa12.66□□□□□ -0.38
USH1C-202ENST00000318024 PRSS22Q9GZN4 317 aa12.66□□□□□ -0.38
USH1C-202ENST00000318024 KLF12Q9Y4X4 402 aa12.66□□□□□ -0.38
USH1C-202ENST00000318024 KMT2BQ9UMN6 2715 aaPredicted RBP12.66□□□□□ -0.38
USH1C-202ENST00000318024 E7EUB6 86 aa12.66□□□□□ -0.38
USH1C-202ENST00000318024 TAX1BP3O14907 124 aa12.66□□□□□ -0.38
USH1C-202ENST00000318024 IGHV4-39P01824 125 aa12.66□□□□□ -0.38
USH1C-202ENST00000318024 HIST1H1EP10412 219 aaKnown RBP12.66□□□□□ -0.38
USH1C-202ENST00000318024 FNDC4Q9H6D8 234 aaPredicted RBP12.66□□□□□ -0.38
USH1C-202ENST00000318024 ONECUT1Q9UBC0 465 aa12.66□□□□□ -0.38
USH1C-202ENST00000318024 FBN2P35556 2912 aa12.66□□□□□ -0.38
USH1C-202ENST00000318024 OR4C46A6NHA9 309 aa12.65□□□□□ -0.38
USH1C-202ENST00000318024 RPS20P60866 119 aaKnown RBP12.65□□□□□ -0.38
USH1C-202ENST00000318024 TMEM95Q3KNT9 176 aa12.65□□□□□ -0.38
USH1C-202ENST00000318024 LINC00322Q6ZN03 302 aaPredicted RBP12.65□□□□□ -0.38
USH1C-202ENST00000318024 LINC00173Q6ZV60 143 aa12.65□□□□□ -0.38
USH1C-202ENST00000318024 OR10X1Q8NGY0 326 aa12.65□□□□□ -0.38
USH1C-202ENST00000318024 SMIM12Q96EX1 92 aa12.65□□□□□ -0.38
USH1C-202ENST00000318024 BPESC1Q9GZL8 116 aa12.65□□□□□ -0.38
USH1C-202ENST00000318024 CGB1A6NKQ9 187 aa12.65□□□□□ -0.38
USH1C-202ENST00000318024 ARF6P62330 175 aa12.65□□□□□ -0.38
USH1C-202ENST00000318024 CSMD1Q96PZ7 3565 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 SYS1-DBNDD2H3BUS1 97 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 CAMPP49913 170 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 TMEM30BQ3MIR4 351 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 MPV17L2Q567V2 206 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 THAP8Q8NA92 274 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 CHCHD1Q96BP2 118 aaKnown RBP12.64□□□□□ -0.39
USH1C-202ENST00000318024 NBPF19A0A087WUL8 3843 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 IGHV1-24A0A0C4DH33 117 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 C19orf71A6NCJ1 209 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 PPBPP02775 128 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 GNG5P63218 68 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 BVES-AS1Q5T3Y7 98 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 FAM162BQ5T6X4 162 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 GTSF1Q8WW33 167 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 TMEM133Q9H2Q1 129 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 EPDR1Q9UM22 224 aa12.64□□□□□ -0.39
USH1C-202ENST00000318024 TCRBV4S1A1TA0A5B7 111 aa12.63□□□□□ -0.39
USH1C-202ENST00000318024 COX7A1P24310 79 aa12.63□□□□□ -0.39
USH1C-202ENST00000318024 ZFP36P26651 326 aaKnown RBP12.63□□□□□ -0.39
USH1C-202ENST00000318024 HBBP68871 147 aa12.63□□□□□ -0.39
USH1C-202ENST00000318024 CT83Q5H943 113 aa12.63□□□□□ -0.39
USH1C-202ENST00000318024 C10orf113Q5VZT2 155 aa12.63□□□□□ -0.39
USH1C-202ENST00000318024 ZNF833PQ6ZTB9 187 aa12.63□□□□□ -0.39
USH1C-202ENST00000318024 TCF24Q7RTU0 167 aa12.63□□□□□ -0.39
USH1C-202ENST00000318024 OR1L4Q8NGR5 311 aa12.63□□□□□ -0.39
USH1C-202ENST00000318024 ST6GALNAC6Q969X2 333 aa12.63□□□□□ -0.39
USH1C-202ENST00000318024 GSX1Q9H4S2 264 aaPredicted RBP12.63□□□□□ -0.39
USH1C-202ENST00000318024 MRPL36Q9P0J6 103 aaKnown RBP12.63□□□□□ -0.39
USH1C-202ENST00000318024 M0QZ24 198 aa12.62□□□□□ -0.39
USH1C-202ENST00000318024 NDUFS8O00217 210 aa12.62□□□□□ -0.39
USH1C-202ENST00000318024 COX7A2P2O60397 106 aa12.62□□□□□ -0.39
USH1C-202ENST00000318024 COX6B1P14854 86 aa12.62□□□□□ -0.39
USH1C-202ENST00000318024 PRR27Q6MZM9 219 aa12.62□□□□□ -0.39
USH1C-202ENST00000318024 DEFB125Q8N687 156 aa12.62□□□□□ -0.39
USH1C-202ENST00000318024 OR4C5Q8NGB2 326 aa12.62□□□□□ -0.39
USH1C-202ENST00000318024 MRPL20Q9BYC9 149 aaKnown RBP12.62□□□□□ -0.39
USH1C-202ENST00000318024 ZNF430Q9H8G1 570 aaPredicted RBP12.62□□□□□ -0.39
USH1C-202ENST00000318024 hDV102S1A0JD36 115 aa12.62□□□□□ -0.39
USH1C-202ENST00000318024 LIPFP07098 398 aa12.62□□□□□ -0.39
USH1C-202ENST00000318024 PRR31Q5SQ13 230 aa12.62□□□□□ -0.39
USH1C-202ENST00000318024 OSR1Q8TAX0 266 aaPredicted RBP12.62□□□□□ -0.39
USH1C-202ENST00000318024 IGFBPL1Q8WX77 278 aa12.62□□□□□ -0.39
USH1C-202ENST00000318024 TENM4Q6N022 2769 aa12.62□□□□□ -0.39
USH1C-202ENST00000318024 CD24P25063 80 aa12.61□□□□□ -0.39
USH1C-202ENST00000318024 WT1-ASQ06250 92 aa12.61□□□□□ -0.39
USH1C-202ENST00000318024 LY6G5BQ8NDX9 201 aa12.61□□□□□ -0.39
USH1C-202ENST00000318024 GPR82Q96P67 336 aa12.61□□□□□ -0.39
USH1C-202ENST00000318024 RPP21Q9H633 154 aaKnown RBP12.61□□□□□ -0.39
USH1C-202ENST00000318024 SCRT2Q9NQ03 307 aa12.61□□□□□ -0.39
USH1C-202ENST00000318024 ZNF492Q9P255 531 aa12.61□□□□□ -0.39
USH1C-202ENST00000318024 SOX21Q9Y651 276 aaPredicted RBP12.61□□□□□ -0.39
USH1C-202ENST00000318024 MOSP00540 346 aa12.61□□□□□ -0.39
USH1C-202ENST00000318024 HLA-DRB1P01911 266 aa12.61□□□□□ -0.39
USH1C-202ENST00000318024 ERHP84090 104 aaKnown RBP12.61□□□□□ -0.39
USH1C-202ENST00000318024 TMEM177Q53S58 311 aa12.61□□□□□ -0.39
USH1C-202ENST00000318024 C8orf46Q8TAG6 207 aa12.61□□□□□ -0.39
USH1C-202ENST00000318024 NPIPB3Q92617 1050 aa12.61□□□□□ -0.39
USH1C-202ENST00000318024 USP9YO00507 2555 aaPredicted RBP12.6□□□□□ -0.39
USH1C-202ENST00000318024 PERPQ96FX8 193 aa12.6□□□□□ -0.39
USH1C-202ENST00000318024 POLQO75417 2590 aa12.6□□□□□ -0.39
USH1C-202ENST00000318024 NUDT3O95989 172 aa12.6□□□□□ -0.39
USH1C-202ENST00000318024 FOXA3P55318 350 aaPredicted RBP12.6□□□□□ -0.39
USH1C-202ENST00000318024 ATP5J2P56134 94 aa12.6□□□□□ -0.39
USH1C-202ENST00000318024 OR5AN1Q8NGI8 311 aa12.6□□□□□ -0.39
USH1C-202ENST00000318024 NDFIP1Q9BT67 221 aa12.6□□□□□ -0.39
USH1C-202ENST00000318024 ZFHX3Q15911 3703 aa12.59□□□□□ -0.39
USH1C-202ENST00000318024 NAV3Q8IVL0 2385 aa12.59□□□□□ -0.39
USH1C-202ENST00000318024 IGHV3-72A0A0B4J1Y9 119 aa12.59□□□□□ -0.39
USH1C-202ENST00000318024 A0A1W2PRD5 423 aa12.59□□□□□ -0.39
USH1C-202ENST00000318024 A0A1W2PRF3 423 aa12.59□□□□□ -0.39
USH1C-202ENST00000318024 A0A1W2PRM7 423 aa12.59□□□□□ -0.39
USH1C-202ENST00000318024 NPIPB6E9PJ23 425 aa12.59□□□□□ -0.39
USH1C-202ENST00000318024 LEPROTL1O95214 131 aa12.59□□□□□ -0.39
USH1C-202ENST00000318024 GOSR1O95249 250 aa12.59□□□□□ -0.39
USH1C-202ENST00000318024 LTAP01374 205 aa12.59□□□□□ -0.39
USH1C-202ENST00000318024 APOHP02749 345 aaPredicted RBP12.59□□□□□ -0.39
USH1C-202ENST00000318024 VAMP3Q15836 100 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms