RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 RASL11AQ6T310 242 aa8.45□□□□□ -1.06
COL3A1-202ENST00000317840 RNASE6Q93091 150 aaKnown RBP8.45□□□□□ -1.06
COL3A1-202ENST00000317840 MUC21A0A0G2JKD1 596 aa8.45□□□□□ -1.06
COL3A1-202ENST00000317840 MUC21A0A140T8X8 626 aa8.45□□□□□ -1.06
COL3A1-202ENST00000317840 NCBP2LA6PVI3 153 aaKnown RBP8.45□□□□□ -1.06
COL3A1-202ENST00000317840 MUC21Q5SSG8 566 aa8.45□□□□□ -1.06
COL3A1-202ENST00000317840 ARHGAP32A7KAX9 2087 aa8.44□□□□□ -1.06
COL3A1-202ENST00000317840 TMEM178BH3BS89 294 aa8.44□□□□□ -1.06
COL3A1-202ENST00000317840 APOBEC3AP31941 199 aaPredicted RBP8.44□□□□□ -1.06
COL3A1-202ENST00000317840 FAM231DQ6ZW35 169 aa8.44□□□□□ -1.06
COL3A1-202ENST00000317840 PSG1P11464 419 aa8.44□□□□□ -1.06
COL3A1-202ENST00000317840 GAGE1Q13065 139 aa8.44□□□□□ -1.06
COL3A1-202ENST00000317840 SLC25A34Q6PIV7 304 aa8.44□□□□□ -1.06
COL3A1-202ENST00000317840 OR4A5Q8NH83 315 aa8.44□□□□□ -1.06
COL3A1-202ENST00000317840 VKORC1Q9BQB6 163 aa8.44□□□□□ -1.06
COL3A1-202ENST00000317840 CEACAM8P31997 349 aaPredicted RBP8.44□□□□□ -1.06
COL3A1-202ENST00000317840 MPV17L2Q567V2 206 aa8.44□□□□□ -1.06
COL3A1-202ENST00000317840 OR8A1Q8NGG7 326 aa8.44□□□□□ -1.06
COL3A1-202ENST00000317840 FMC1Q96HJ9 113 aa8.44□□□□□ -1.06
COL3A1-202ENST00000317840 ATP5L2Q7Z4Y8 100 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 PPP1R27Q86WC6 154 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 Q8NA96 180 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 TP73-AS1Q9UF72 201 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 DMXL2Q8TDJ6 3036 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 C22orf46C9J442 243 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 OR5AL1P0C617 328 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 TEX36Q5VZQ5 186 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 AP5S1Q9NUS5 200 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 E7EQL1 145 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 IGHV1-8P0DP01 117 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 FCGR2BP31994 310 aaPredicted RBP8.43□□□□□ -1.06
COL3A1-202ENST00000317840 RIGQ13278 110 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 LINC00173Q6ZV60 143 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 BPIFA4PQ86YQ2 179 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 Q8N976 141 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 TMEM133Q9H2Q1 129 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 HSPB8Q9UJY1 196 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 LRRK2Q5S007 2527 aa8.43□□□□□ -1.06
COL3A1-202ENST00000317840 IL4P05112 153 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 LIPFP07098 398 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 CTRLP40313 264 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 CSN1S1P47710 185 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 C8orf46Q8TAG6 207 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 ZFHX4Q86UP3 3567 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 IGKV1D-37A0A075B6S9 117 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 IGHV3OR16-10A0A075B7F0 116 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 A0A1B0GUT8 65 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 A1L4Q6 167 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 GNG7O60262 68 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 LINC00322Q6ZN03 302 aaPredicted RBP8.42□□□□□ -1.06
COL3A1-202ENST00000317840 ZNF841Q6ZN19 808 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 VPS25Q9BRG1 176 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 AAMDCQ9H7C9 122 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 POLQO75417 2590 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 LOC102724200A0A096LPH7 203 aaPredicted RBP8.42□□□□□ -1.06
COL3A1-202ENST00000317840 SYS1-DBNDD2H3BUS1 97 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 APOHP02749 345 aaPredicted RBP8.42□□□□□ -1.06
COL3A1-202ENST00000317840 PKD1L2Q7Z442 2459 aa8.42□□□□□ -1.06
COL3A1-202ENST00000317840 WIPF2Q8TF74 440 aaPredicted RBP8.41□□□□□ -1.06
COL3A1-202ENST00000317840 TRGV9Q99603 122 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 CTSZQ9UBR2 303 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 PPIAL4CA0A0B4J2A2 164 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 TOMM40O96008 361 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 PPIAL4GP0DN37 164 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 LOXP28300 417 aaPredicted RBP8.41□□□□□ -1.06
COL3A1-202ENST00000317840 SLC25A39Q9BZJ4 359 aaPredicted RBP8.41□□□□□ -1.06
COL3A1-202ENST00000317840 SIGLEC9Q9Y336 463 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 MRPS16Q9Y3D3 137 aaKnown RBP8.41□□□□□ -1.06
COL3A1-202ENST00000317840 IGHV3-35A0A0C4DH35 117 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 IGLC7A0M8Q6 106 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 B9A039 149 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 M0R3E3 92 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 HLA-DRB1P01911 266 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 GNLYP22749 145 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 KLF17Q5JT82 389 aaPredicted RBP8.41□□□□□ -1.06
COL3A1-202ENST00000317840 GTSF1Q8WW33 167 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 IGFBPL1Q8WX77 278 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 TMUB1Q9BVT8 246 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 SELENOKQ9Y6D0 94 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 MAP1AP78559 2803 aaPredicted RBP8.41□□□□□ -1.06
COL3A1-202ENST00000317840 ADGRG4Q8IZF6 3080 aa8.41□□□□□ -1.06
COL3A1-202ENST00000317840 CFAP47Q6ZTR5 3102 aa8.4□□□□□ -1.06
COL3A1-202ENST00000317840 IGHV1-24A0A0C4DH33 117 aa8.4□□□□□ -1.06
COL3A1-202ENST00000317840 PSMB11A5LHX3 300 aa8.4□□□□□ -1.06
COL3A1-202ENST00000317840 TEX45Q8NA69 505 aa8.4□□□□□ -1.06
COL3A1-202ENST00000317840 THAP8Q8NA92 274 aa8.4□□□□□ -1.06
COL3A1-202ENST00000317840 NUP37Q8NFH4 326 aa8.4□□□□□ -1.06
COL3A1-202ENST00000317840 COX11Q9Y6N1 276 aa8.4□□□□□ -1.06
COL3A1-202ENST00000317840 IGHV2-26A0A0B4J1V2 119 aa8.4□□□□□ -1.06
COL3A1-202ENST00000317840 VWC2LB2RUY7 222 aa8.4□□□□□ -1.06
COL3A1-202ENST00000317840 FBLN7Q53RD9 439 aa8.4□□□□□ -1.06
COL3A1-202ENST00000317840 MBD6Q96DN6 1003 aa8.4□□□□□ -1.06
COL3A1-202ENST00000317840 OTORQ9NRC9 128 aa8.4□□□□□ -1.06
COL3A1-202ENST00000317840 SOX21Q9Y651 276 aaPredicted RBP8.4□□□□□ -1.06
COL3A1-202ENST00000317840 SONP18583 2426 aaKnown RBP8.4□□□□□ -1.07
COL3A1-202ENST00000317840 IGHV3OR16-8A0A075B7F1 116 aa8.4□□□□□ -1.07
COL3A1-202ENST00000317840 CCL25O15444 150 aa8.4□□□□□ -1.07
COL3A1-202ENST00000317840 SFTPCP11686 197 aa8.4□□□□□ -1.07
COL3A1-202ENST00000317840 UQCRFS1P47985 274 aa8.4□□□□□ -1.07
COL3A1-202ENST00000317840 RUSC1-AS1Q66K80 236 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms