RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 P0DMU3 169 aa9.15□□□□□ -0.94
CKS2-201ENST00000314355 FAM231AP0DMU4 169 aa9.15□□□□□ -0.94
CKS2-201ENST00000314355 FAM231CP0DMU5 169 aa9.15□□□□□ -0.94
CKS2-201ENST00000314355 PVALBP20472 110 aaPredicted RBP9.15□□□□□ -0.94
CKS2-201ENST00000314355 BCAP31P51572 246 aa9.15□□□□□ -0.94
CKS2-201ENST00000314355 B2MP61769 119 aa9.15□□□□□ -0.94
CKS2-201ENST00000314355 RRAS2P62070 204 aaPredicted RBP9.15□□□□□ -0.94
CKS2-201ENST00000314355 RAB31Q13636 194 aa9.15□□□□□ -0.94
CKS2-201ENST00000314355 PXDC1Q5TGL8 231 aa9.15□□□□□ -0.94
CKS2-201ENST00000314355 GDF5OSQ5U4N7 250 aa9.15□□□□□ -0.94
CKS2-201ENST00000314355 ZNF705AQ6ZN79 300 aaPredicted RBP9.15□□□□□ -0.94
CKS2-201ENST00000314355 SLC25A39Q9BZJ4 359 aaPredicted RBP9.15□□□□□ -0.94
CKS2-201ENST00000314355 FAM25EA8MYX2 175 aa9.14□□□□□ -0.95
CKS2-201ENST00000314355 F6UB75 175 aa9.14□□□□□ -0.95
CKS2-201ENST00000314355 SOCS3O14543 225 aa9.14□□□□□ -0.95
CKS2-201ENST00000314355 METTL15P1P0C7V9 234 aa9.14□□□□□ -0.95
CKS2-201ENST00000314355 IL7P13232 177 aa9.14□□□□□ -0.95
CKS2-201ENST00000314355 C12orf74Q32Q52 190 aa9.14□□□□□ -0.95
CKS2-201ENST00000314355 ZBTB8BQ8NAP8 495 aaPredicted RBP9.14□□□□□ -0.95
CKS2-201ENST00000314355 MITD1Q8WV92 249 aa9.14□□□□□ -0.95
CKS2-201ENST00000314355 GGACTQ9BVM4 153 aa9.14□□□□□ -0.95
CKS2-201ENST00000314355 SLC35B3Q9H1N7 401 aa9.14□□□□□ -0.95
CKS2-201ENST00000314355 C5orf51A6NDU8 294 aa9.13□□□□□ -0.95
CKS2-201ENST00000314355 ZNF705FA8MVS1 300 aaPredicted RBP9.13□□□□□ -0.95
CKS2-201ENST00000314355 LYRM1O43325 122 aa9.13□□□□□ -0.95
CKS2-201ENST00000314355 ZNF705DP0CH99 300 aaPredicted RBP9.13□□□□□ -0.95
CKS2-201ENST00000314355 ZNF705BP0CI00 300 aaPredicted RBP9.13□□□□□ -0.95
CKS2-201ENST00000314355 DEFB1P60022 68 aa9.13□□□□□ -0.95
CKS2-201ENST00000314355 RHOBP62745 196 aa9.13□□□□□ -0.95
CKS2-201ENST00000314355 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.13□□□□□ -0.95
CKS2-201ENST00000314355 TMEM182Q6ZP80 229 aaPredicted RBP9.13□□□□□ -0.95
CKS2-201ENST00000314355 Q6ZRG5 221 aa9.13□□□□□ -0.95
CKS2-201ENST00000314355 ZNF767PQ75MW2 155 aa9.13□□□□□ -0.95
CKS2-201ENST00000314355 ZNF546Q86UE3 836 aa9.13□□□□□ -0.95
CKS2-201ENST00000314355 ZNF738Q8NE65 137 aa9.13□□□□□ -0.95
CKS2-201ENST00000314355 FAM210BQ96KR6 192 aa9.13□□□□□ -0.95
CKS2-201ENST00000314355 NIPSNAP3BQ9BS92 247 aa9.13□□□□□ -0.95
CKS2-201ENST00000314355 SHANK2-AS3Q9BTD1 123 aa9.13□□□□□ -0.95
CKS2-201ENST00000314355 ARL6Q9H0F7 186 aa9.13□□□□□ -0.95
CKS2-201ENST00000314355 C20orf85Q9H1P6 137 aa9.13□□□□□ -0.95
CKS2-201ENST00000314355 LOC102723971A0A1B0GUV8 181 aa9.12□□□□□ -0.95
CKS2-201ENST00000314355 H3BRN7 92 aa9.12□□□□□ -0.95
CKS2-201ENST00000314355 TCRBP04435 133 aa9.12□□□□□ -0.95
CKS2-201ENST00000314355 PLP1P60201 277 aa9.12□□□□□ -0.95
CKS2-201ENST00000314355 TMEM14EPQ6UXP3 125 aa9.12□□□□□ -0.95
CKS2-201ENST00000314355 UBE2DNLQ8IWF7 75 aa9.12□□□□□ -0.95
CKS2-201ENST00000314355 IGF2BP2-AS1Q96M15 143 aa9.12□□□□□ -0.95
CKS2-201ENST00000314355 SCRT1Q9BWW7 348 aa9.12□□□□□ -0.95
CKS2-201ENST00000314355 ARV1Q9H2C2 271 aa9.12□□□□□ -0.95
CKS2-201ENST00000314355 CELA1Q9UNI1 258 aa9.12□□□□□ -0.95
CKS2-201ENST00000314355 LSM5Q9Y4Y9 91 aaKnown RBP9.12□□□□□ -0.95
CKS2-201ENST00000314355 INSP01308 110 aa9.11□□□□□ -0.95
CKS2-201ENST00000314355 CAV2P51636 162 aa9.11□□□□□ -0.95
CKS2-201ENST00000314355 CNN1P51911 297 aaKnown RBP9.11□□□□□ -0.95
CKS2-201ENST00000314355 DAD1P61803 113 aa9.11□□□□□ -0.95
CKS2-201ENST00000314355 FAM222AQ5U5X8 452 aa9.11□□□□□ -0.95
CKS2-201ENST00000314355 MZT2BQ6NZ67 158 aa9.11□□□□□ -0.95
CKS2-201ENST00000314355 BPIFA4PQ86YQ2 179 aa9.11□□□□□ -0.95
CKS2-201ENST00000314355 ZNF709Q8N972 641 aa9.11□□□□□ -0.95
CKS2-201ENST00000314355 RCL1Q9Y2P8 373 aaKnown RBP9.11□□□□□ -0.95
CKS2-201ENST00000314355 DNAH1Q9P2D7 4330 aa9.1□□□□□ -0.95
CKS2-201ENST00000314355 TRAV6A0A075B6T7 132 aa9.1□□□□□ -0.95
CKS2-201ENST00000314355 FAM240BA0A1B0GVZ2 78 aa9.1□□□□□ -0.95
CKS2-201ENST00000314355 C7orf66A4D0T2 115 aa9.1□□□□□ -0.95
CKS2-201ENST00000314355 PMS2P5A8MQ11 134 aa9.1□□□□□ -0.95
CKS2-201ENST00000314355 COX7A2P2O60397 106 aa9.1□□□□□ -0.95
CKS2-201ENST00000314355 HTN3P15516 51 aa9.1□□□□□ -0.95
CKS2-201ENST00000314355 HIST1H1AQ02539 215 aaPredicted RBP9.1□□□□□ -0.95
CKS2-201ENST00000314355 OXA1LQ15070 435 aa9.1□□□□□ -0.95
CKS2-201ENST00000314355 GSG1LQ6UXU4 331 aa9.1□□□□□ -0.95
CKS2-201ENST00000314355 LINC00305Q7Z4B0 112 aa9.1□□□□□ -0.95
CKS2-201ENST00000314355 C12orf45Q8N5I9 185 aaPredicted RBP9.1□□□□□ -0.95
CKS2-201ENST00000314355 ZNF431Q8TF32 576 aaPredicted RBP9.1□□□□□ -0.95
CKS2-201ENST00000314355 C20orf173Q96LM9 149 aa9.1□□□□□ -0.95
CKS2-201ENST00000314355 UHRF2Q96PU4 802 aa9.1□□□□□ -0.95
CKS2-201ENST00000314355 SDHCQ99643 169 aaPredicted RBP9.1□□□□□ -0.95
CKS2-201ENST00000314355 SLC50A1Q9BRV3 221 aa9.1□□□□□ -0.95
CKS2-201ENST00000314355 CCDC32Q9BV29 185 aa9.1□□□□□ -0.95
CKS2-201ENST00000314355 DKK2Q9UBU2 259 aa9.1□□□□□ -0.95
CKS2-201ENST00000314355 YTHDF2Q9Y5A9 579 aaKnown RBP9.1□□□□□ -0.95
CKS2-201ENST00000314355 K7EPK0 472 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 AGPAT2O15120 278 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 MBPP02686 304 aaPredicted RBP9.09□□□□□ -0.95
CKS2-201ENST00000314355 H2AFB2P0C5Z0 115 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 CXCL2P19875 107 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 BTCP35070 178 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 SLC38A11Q08AI6 406 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 PSG3Q16557 428 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 SPINK13Q1W4C9 94 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 C10orf113Q5VZT2 155 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 IGFL4Q6B9Z1 124 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 LCN15Q6UWW0 184 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 C1orf158Q8N1D5 194 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 RNF182Q8N6D2 247 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 POM121L12Q8N7R1 296 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 OR11H7Q8NGC8 314 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 OR1L4Q8NGR5 311 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 S100ZQ8WXG8 99 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 C2orf50Q96LR7 162 aa9.09□□□□□ -0.95
CKS2-201ENST00000314355 LINC01587Q99440 93 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms