RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 Q0VG73 95 aa9.83□□□□□ -0.84
RNF4-201ENST00000314289 SIRPDQ9H106 197 aa9.83□□□□□ -0.84
RNF4-201ENST00000314289 ZFP30Q9Y2G7 519 aa9.83□□□□□ -0.84
RNF4-201ENST00000314289 MGST1P10620 155 aaKnown RBP9.82□□□□□ -0.84
RNF4-201ENST00000314289 BPIFB3P59826 476 aa9.82□□□□□ -0.84
RNF4-201ENST00000314289 C5orf64Q2M2E5 130 aa9.82□□□□□ -0.84
RNF4-201ENST00000314289 ETFRF1Q6IPR1 90 aa9.82□□□□□ -0.84
RNF4-201ENST00000314289 Q8N976 141 aa9.82□□□□□ -0.84
RNF4-201ENST00000314289 TMEM116Q8NCL8 245 aa9.82□□□□□ -0.84
RNF4-201ENST00000314289 KCNS1Q96KK3 526 aa9.82□□□□□ -0.84
RNF4-201ENST00000314289 IGHV2-70DA0A0C4DH43 119 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 A0A1W2PS18 150 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 I3L2K1 104 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 CA1P00915 261 aaPredicted RBP9.81□□□□□ -0.84
RNF4-201ENST00000314289 TMEM11P17152 192 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 SAA4P35542 130 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 PAX2Q02962 417 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 MAJINQ3KP22 176 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 BCL6BQ8N143 479 aaPredicted RBP9.81□□□□□ -0.84
RNF4-201ENST00000314289 OR1L4Q8NGR5 311 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 TRAV9-1A0A075B6T8 112 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 IGHV3OR16-8A0A075B7F1 116 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 IGHV3-35A0A0C4DH35 117 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 HYPMO75409 117 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 HINT1P49773 126 aaPredicted RBP9.81□□□□□ -0.84
RNF4-201ENST00000314289 FXYD5Q96DB9 178 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 GNB1LQ9BYB4 327 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 MRPL32Q9BYC8 188 aaKnown RBP9.81□□□□□ -0.84
RNF4-201ENST00000314289 UQCR10Q9UDW1 63 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 K7EIM0 57 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 IGLC1P0CG04 106 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 LCN12Q6JVE5 192 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 PIP4P2Q8N4L2 257 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 BBC3Q96PG8 261 aaPredicted RBP9.81□□□□□ -0.84
RNF4-201ENST00000314289 C19orf24Q9BVV8 132 aa9.81□□□□□ -0.84
RNF4-201ENST00000314289 C3orf79P0CE67 100 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 PRR31Q5SQ13 230 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 BRD3OSQ6XYD6 125 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 CCL19Q99731 98 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 RASL11BQ9BPW5 248 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 LAMTOR2Q9Y2Q5 125 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 SOX21Q9Y651 276 aaPredicted RBP9.8□□□□□ -0.84
RNF4-201ENST00000314289 C20orf202A1L168 122 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 C9JCJ5 164 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 NDUFB8O95169 186 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 IGKV1-17P01599 117 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 IGLC2P0DOY2 106 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 IGLC3P0DOY3 106 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 CTRLP40313 264 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 PTTG1IPP53801 180 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 TMEM136Q6ZRR5 245 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 C11orf52Q96A22 123 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 TRGV9Q99603 122 aa9.8□□□□□ -0.84
RNF4-201ENST00000314289 IGHV4-61A0A0C4DH41 118 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 OVOL3O00110 214 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 ZNF324O75467 553 aaPredicted RBP9.79□□□□□ -0.84
RNF4-201ENST00000314289 NDUFA3O95167 84 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 NPBQ8NG41 125 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 ARPC1AQ92747 370 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 PERPQ96FX8 193 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 RNF5Q99942 180 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 PRR27Q6MZM9 219 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 TMEM219Q86XT9 240 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 TRBV9A0A0B4J1U6 114 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 A0A1W2PRE2 83 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 A1L4Q6 167 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 LINC01548A6NM66 108 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 CORTO00230 105 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 BMPR1BO00238 502 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 RPL19P84098 196 aaKnown RBP9.79□□□□□ -0.84
RNF4-201ENST00000314289 PVRIGQ6DKI7 326 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 WDR73Q6P4I2 378 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 UNQ5815/PRO19632Q6UWF5 114 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 ZNF329Q86UD4 541 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 BORCS7Q96B45 105 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 ASCL2Q99929 193 aa9.79□□□□□ -0.84
RNF4-201ENST00000314289 TLN2Q9Y4G6 2542 aa9.78□□□□□ -0.84
RNF4-201ENST00000314289 PGPA6NDG6 321 aa9.78□□□□□ -0.84
RNF4-201ENST00000314289 ISLRO14498 428 aa9.78□□□□□ -0.84
RNF4-201ENST00000314289 OR2J3O76001 311 aa9.78□□□□□ -0.84
RNF4-201ENST00000314289 CCDC144NLQ6NUI1 221 aa9.78□□□□□ -0.84
RNF4-201ENST00000314289 AJUBAQ96IF1 538 aa9.78□□□□□ -0.84
RNF4-201ENST00000314289 CDC42EP3Q9UKI2 254 aa9.78□□□□□ -0.84
RNF4-201ENST00000314289 MT-ND6P03923 174 aa9.78□□□□□ -0.84
RNF4-201ENST00000314289 NBEAP1P0C6P0 100 aa9.78□□□□□ -0.84
RNF4-201ENST00000314289 ATP5J2P56134 94 aa9.78□□□□□ -0.84
RNF4-201ENST00000314289 ECSCRQ19T08 205 aa9.78□□□□□ -0.84
RNF4-201ENST00000314289 IBA57Q5T440 356 aaKnown RBP9.78□□□□□ -0.84
RNF4-201ENST00000314289 C1orf122Q6ZSJ8 110 aa9.78□□□□□ -0.84
RNF4-201ENST00000314289 NIT1Q86X76 327 aa9.78□□□□□ -0.84
RNF4-201ENST00000314289 PRSS47A8MTI9 375 aa9.77□□□□□ -0.84
RNF4-201ENST00000314289 CCL25O15444 150 aa9.77□□□□□ -0.84
RNF4-201ENST00000314289 SLC25A5P05141 298 aaKnown RBP9.77□□□□□ -0.84
RNF4-201ENST00000314289 OR10J3Q5JRS4 329 aa9.77□□□□□ -0.84
RNF4-201ENST00000314289 TSKUQ8WUA8 353 aa9.77□□□□□ -0.84
RNF4-201ENST00000314289 FAM168AQ92567 244 aa9.77□□□□□ -0.84
RNF4-201ENST00000314289 C17orf77Q96MU5 243 aa9.77□□□□□ -0.84
RNF4-201ENST00000314289 FANCD2OSQ96PS1 177 aa9.77□□□□□ -0.84
RNF4-201ENST00000314289 LINC00527Q9UJ94 153 aa9.77□□□□□ -0.84
RNF4-201ENST00000314289 NAV2Q8IVL1 2488 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms