RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 ZNF138P52744 262 aa20.07■□□□□ 0.8
HOXB3-201ENST00000311626 Q6ZN92 141 aa20.07■□□□□ 0.8
HOXB3-201ENST00000311626 LINC00173Q6ZV60 143 aa20.06■□□□□ 0.8
HOXB3-201ENST00000311626 TNFRSF14Q92956 283 aa20.06■□□□□ 0.8
HOXB3-201ENST00000311626 A8MWL6 223 aa20.06■□□□□ 0.8
HOXB3-201ENST00000311626 IGLC2P0DOY2 106 aa20.06■□□□□ 0.8
HOXB3-201ENST00000311626 IGLC3P0DOY3 106 aa20.06■□□□□ 0.8
HOXB3-201ENST00000311626 Q86TA4 180 aa20.06■□□□□ 0.8
HOXB3-201ENST00000311626 LPAR2Q9HBW0 351 aa20.06■□□□□ 0.8
HOXB3-201ENST00000311626 TP73-AS1Q9UF72 201 aa20.06■□□□□ 0.8
HOXB3-201ENST00000311626 OR2J3O76001 311 aa20.06■□□□□ 0.8
HOXB3-201ENST00000311626 KLF5Q13887 457 aaPredicted RBP20.06■□□□□ 0.8
HOXB3-201ENST00000311626 M0QZK8 103 aa20.05■□□□□ 0.8
HOXB3-201ENST00000311626 COL8A1P27658 744 aa20.05■□□□□ 0.8
HOXB3-201ENST00000311626 PLP1P60201 277 aa20.05■□□□□ 0.8
HOXB3-201ENST00000311626 TMEM208Q9BTX3 173 aa20.05■□□□□ 0.8
HOXB3-201ENST00000311626 SCNM1Q9BWG6 230 aa20.05■□□□□ 0.8
HOXB3-201ENST00000311626 HRNRQ86YZ3 2850 aaPredicted RBP20.05■□□□□ 0.8
HOXB3-201ENST00000311626 IGLV2-11P01706 119 aa20.05■□□□□ 0.8
HOXB3-201ENST00000311626 OR8B2Q96RD0 313 aa20.05■□□□□ 0.8
HOXB3-201ENST00000311626 K7EIM0 57 aa20.04■□□□□ 0.8
HOXB3-201ENST00000311626 RBPJQ06330 500 aa20.04■□□□□ 0.8
HOXB3-201ENST00000311626 TIMM8BQ9Y5J9 83 aaPredicted RBP20.04■□□□□ 0.8
HOXB3-201ENST00000311626 IGF2RP11717 2491 aa20.04■□□□□ 0.8
HOXB3-201ENST00000311626 ZNF785A8K8V0 405 aa20.04■□□□□ 0.8
HOXB3-201ENST00000311626 LY6LH3BQJ8 138 aa20.04■□□□□ 0.8
HOXB3-201ENST00000311626 VKORC1Q9BQB6 163 aa20.04■□□□□ 0.8
HOXB3-201ENST00000311626 WNK2Q9Y3S1 2297 aa20.03■□□□□ 0.8
HOXB3-201ENST00000311626 NPSP0C0P6 89 aa20.03■□□□□ 0.8
HOXB3-201ENST00000311626 OTORQ9NRC9 128 aa20.03■□□□□ 0.8
HOXB3-201ENST00000311626 HES1Q14469 280 aa20.03■□□□□ 0.8
HOXB3-201ENST00000311626 MCRIP2Q9BUT9 160 aaKnown RBP20.03■□□□□ 0.8
HOXB3-201ENST00000311626 ATP5L2Q7Z4Y8 100 aa20.02■□□□□ 0.8
HOXB3-201ENST00000311626 C2orf70A6NJV1 201 aa20.02■□□□□ 0.79
HOXB3-201ENST00000311626 IGHV3-23P01764 117 aa20.02■□□□□ 0.79
HOXB3-201ENST00000311626 OR8B3Q8NGG8 313 aa20.02■□□□□ 0.79
HOXB3-201ENST00000311626 RBM14Q96PK6 669 aaKnown RBP20.02■□□□□ 0.79
HOXB3-201ENST00000311626 UQCR10Q9UDW1 63 aa20.02■□□□□ 0.79
HOXB3-201ENST00000311626 M0R3E3 92 aa20.01■□□□□ 0.79
HOXB3-201ENST00000311626 IL4P05112 153 aa20.01■□□□□ 0.79
HOXB3-201ENST00000311626 ZC2HC1AQ96GY0 325 aa20.01■□□□□ 0.79
HOXB3-201ENST00000311626 FCGR2BP31994 310 aaPredicted RBP20.01■□□□□ 0.79
HOXB3-201ENST00000311626 HNRNPA3P51991 378 aaKnown RBP20.01■□□□□ 0.79
HOXB3-201ENST00000311626 RBPMS2Q6ZRY4 209 aaKnown RBP20.01■□□□□ 0.79
HOXB3-201ENST00000311626 STPG4Q8N801 248 aa20.01■□□□□ 0.79
HOXB3-201ENST00000311626 CSN3P07498 182 aa20■□□□□ 0.79
HOXB3-201ENST00000311626 TPPP3Q9BW30 176 aa20■□□□□ 0.79
HOXB3-201ENST00000311626 ZNF492Q9P255 531 aa20■□□□□ 0.79
HOXB3-201ENST00000311626 BTF3P20290 206 aaKnown RBP20■□□□□ 0.79
HOXB3-201ENST00000311626 COL6A6A6NMZ7 2263 aa20■□□□□ 0.79
HOXB3-201ENST00000311626 K7ENP7 123 aa19.99■□□□□ 0.79
HOXB3-201ENST00000311626 CHEK1O14757 476 aa19.99■□□□□ 0.79
HOXB3-201ENST00000311626 LIPFP07098 398 aa19.99■□□□□ 0.79
HOXB3-201ENST00000311626 HTR1DP28221 377 aa19.99■□□□□ 0.79
HOXB3-201ENST00000311626 Q6ZVH6 145 aa19.99■□□□□ 0.79
HOXB3-201ENST00000311626 CCL21O00585 134 aa19.98■□□□□ 0.79
HOXB3-201ENST00000311626 NBL1P41271 181 aa19.98■□□□□ 0.79
HOXB3-201ENST00000311626 FAM120AOSQ5T036 256 aa19.98■□□□□ 0.79
HOXB3-201ENST00000311626 TRBV19A0A075B6N1 114 aa19.98■□□□□ 0.79
HOXB3-201ENST00000311626 H0Y8G0 127 aa19.98■□□□□ 0.79
HOXB3-201ENST00000311626 ZNF491Q8N8L2 437 aa19.98■□□□□ 0.79
HOXB3-201ENST00000311626 SMIM12Q96EX1 92 aa19.98■□□□□ 0.79
HOXB3-201ENST00000311626 IGLL1P15814 213 aa19.97■□□□□ 0.79
HOXB3-201ENST00000311626 SHANK2-AS3Q9BTD1 123 aa19.97■□□□□ 0.79
HOXB3-201ENST00000311626 IGHV1-24A0A0C4DH33 117 aa19.97■□□□□ 0.79
HOXB3-201ENST00000311626 NBR2O15453 112 aa19.97■□□□□ 0.79
HOXB3-201ENST00000311626 DLEU1O43261 78 aa19.97■□□□□ 0.79
HOXB3-201ENST00000311626 HINT1P49773 126 aaPredicted RBP19.97■□□□□ 0.79
HOXB3-201ENST00000311626 TMEM14CQ9P0S9 112 aa19.97■□□□□ 0.79
HOXB3-201ENST00000311626 CACNA1BQ00975 2339 aa19.96■□□□□ 0.79
HOXB3-201ENST00000311626 IGHV3OR16-8A0A075B7F1 116 aa19.96■□□□□ 0.79
HOXB3-201ENST00000311626 ARMS2P0C7Q2 107 aa19.96■□□□□ 0.79
HOXB3-201ENST00000311626 HLA-DRB1P01911 266 aa19.96■□□□□ 0.79
HOXB3-201ENST00000311626 BPIFA4PQ86YQ2 179 aa19.96■□□□□ 0.79
HOXB3-201ENST00000311626 RNF125Q96EQ8 232 aa19.96■□□□□ 0.79
HOXB3-201ENST00000311626 DPM3Q9P2X0 92 aa19.96■□□□□ 0.79
HOXB3-201ENST00000311626 OR4F17Q8NGA8 305 aa19.95■□□□□ 0.78
HOXB3-201ENST00000311626 C8orf49Q96NF6 230 aa19.95■□□□□ 0.78
HOXB3-201ENST00000311626 LAMTOR2Q9Y2Q5 125 aa19.95■□□□□ 0.78
HOXB3-201ENST00000311626 TMSB15BA0A087X1C1 80 aa19.95■□□□□ 0.78
HOXB3-201ENST00000311626 CT83Q5H943 113 aa19.95■□□□□ 0.78
HOXB3-201ENST00000311626 SIGLEC15Q6ZMC9 328 aa19.95■□□□□ 0.78
HOXB3-201ENST00000311626 CFHR4Q92496 578 aa19.95■□□□□ 0.78
HOXB3-201ENST00000311626 LOC102724200A0A096LPH7 203 aaPredicted RBP19.94■□□□□ 0.78
HOXB3-201ENST00000311626 MUC21A0A0G2JKD1 596 aa19.94■□□□□ 0.78
HOXB3-201ENST00000311626 MUC21A0A140T8X8 626 aa19.94■□□□□ 0.78
HOXB3-201ENST00000311626 H3BRN7 92 aa19.94■□□□□ 0.78
HOXB3-201ENST00000311626 CRIP1P50238 77 aa19.94■□□□□ 0.78
HOXB3-201ENST00000311626 PAX2Q02962 417 aa19.94■□□□□ 0.78
HOXB3-201ENST00000311626 MUC21Q5SSG8 566 aa19.94■□□□□ 0.78
HOXB3-201ENST00000311626 DYNAPQ8N1N2 210 aa19.94■□□□□ 0.78
HOXB3-201ENST00000311626 PRSS47A8MTI9 375 aa19.94■□□□□ 0.78
HOXB3-201ENST00000311626 NPIPB6E9PJ23 425 aa19.94■□□□□ 0.78
HOXB3-201ENST00000311626 OVOL3O00110 214 aa19.94■□□□□ 0.78
HOXB3-201ENST00000311626 COL5A1-AS1Q5SY13 56 aa19.94■□□□□ 0.78
HOXB3-201ENST00000311626 PSG8Q9UQ74 426 aa19.94■□□□□ 0.78
HOXB3-201ENST00000311626 TRAV9-2A0A087WT02 112 aa19.93■□□□□ 0.78
HOXB3-201ENST00000311626 NCBP2LA6PVI3 153 aaKnown RBP19.93■□□□□ 0.78
HOXB3-201ENST00000311626 LY6G5BQ8NDX9 201 aa19.93■□□□□ 0.78
HOXB3-201ENST00000311626 GOLT1BQ9Y3E0 138 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 533 ms