RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 KHDC3LQ587J8 217 aa13.84□□□□□ -0.19
HMGA1-201ENST00000311487 GPHB5Q86YW7 130 aa13.84□□□□□ -0.19
HMGA1-201ENST00000311487 OR10G4Q8NGN3 311 aa13.84□□□□□ -0.19
HMGA1-201ENST00000311487 OR10G9Q8NGN4 311 aa13.84□□□□□ -0.19
HMGA1-201ENST00000311487 OR10G7Q8NGN6 311 aa13.84□□□□□ -0.19
HMGA1-201ENST00000311487 RXFP4Q8TDU9 374 aa13.84□□□□□ -0.19
HMGA1-201ENST00000311487 Q8WTZ3 238 aa13.84□□□□□ -0.19
HMGA1-201ENST00000311487 SLC39A9Q9NUM3 307 aa13.84□□□□□ -0.19
HMGA1-201ENST00000311487 MPDU1O75352 247 aa13.84□□□□□ -0.19
HMGA1-201ENST00000311487 CD33P20138 364 aa13.84□□□□□ -0.19
HMGA1-201ENST00000311487 C1QL4Q86Z23 238 aa13.84□□□□□ -0.19
HMGA1-201ENST00000311487 OR9G4Q8NGQ1 327 aa13.84□□□□□ -0.19
HMGA1-201ENST00000311487 ZFAND3Q9H8U3 227 aa13.84□□□□□ -0.19
HMGA1-201ENST00000311487 SLC25A22Q9H936 323 aa13.84□□□□□ -0.19
HMGA1-201ENST00000311487 CTXND1A0A1B0GTU2 59 aa13.83□□□□□ -0.2
HMGA1-201ENST00000311487 NDUFA4O00483 81 aa13.83□□□□□ -0.2
HMGA1-201ENST00000311487 TOMM40O96008 361 aa13.83□□□□□ -0.2
HMGA1-201ENST00000311487 YPEL3P61236 119 aaPredicted RBP13.83□□□□□ -0.2
HMGA1-201ENST00000311487 OR1B1Q8NGR6 318 aa13.83□□□□□ -0.2
HMGA1-201ENST00000311487 GGTLC1Q9BX51 225 aa13.83□□□□□ -0.2
HMGA1-201ENST00000311487 FNDC10F2Z333 226 aa13.82□□□□□ -0.2
HMGA1-201ENST00000311487 LINC00869P0C866 280 aa13.82□□□□□ -0.2
HMGA1-201ENST00000311487 BCL2P10415 239 aa13.82□□□□□ -0.2
HMGA1-201ENST00000311487 IGLL1P15814 213 aa13.82□□□□□ -0.2
HMGA1-201ENST00000311487 GCSAMLQ5JQS6 135 aa13.82□□□□□ -0.2
HMGA1-201ENST00000311487 SOHLH1Q5JUK2 328 aa13.82□□□□□ -0.2
HMGA1-201ENST00000311487 TMEM190Q8WZ59 177 aa13.82□□□□□ -0.2
HMGA1-201ENST00000311487 SLC45A2Q9UMX9 530 aa13.82□□□□□ -0.2
HMGA1-201ENST00000311487 SCGB2A1O75556 95 aa13.82□□□□□ -0.2
HMGA1-201ENST00000311487 ACOT6Q3I5F7 207 aaPredicted RBP13.82□□□□□ -0.2
HMGA1-201ENST00000311487 ADAMTSL5Q6ZMM2 481 aa13.82□□□□□ -0.2
HMGA1-201ENST00000311487 STPG3Q8N7X2 389 aa13.82□□□□□ -0.2
HMGA1-201ENST00000311487 UHRF2Q96PU4 802 aa13.82□□□□□ -0.2
HMGA1-201ENST00000311487 ATP6V0BQ99437 205 aa13.82□□□□□ -0.2
HMGA1-201ENST00000311487 ACTR3CQ9C0K3 210 aaPredicted RBP13.82□□□□□ -0.2
HMGA1-201ENST00000311487 TMEM213A2RRL7 107 aa13.81□□□□□ -0.2
HMGA1-201ENST00000311487 SAP30O75446 220 aa13.81□□□□□ -0.2
HMGA1-201ENST00000311487 PMS2P11Q13670 270 aa13.81□□□□□ -0.2
HMGA1-201ENST00000311487 CYB561D1Q8N8Q1 229 aa13.81□□□□□ -0.2
HMGA1-201ENST00000311487 RNF125Q96EQ8 232 aa13.81□□□□□ -0.2
HMGA1-201ENST00000311487 HMGB3O15347 200 aaKnown RBP13.8□□□□□ -0.2
HMGA1-201ENST00000311487 LEMD1Q68G75 181 aa13.8□□□□□ -0.2
HMGA1-201ENST00000311487 RAB24Q969Q5 203 aa13.8□□□□□ -0.2
HMGA1-201ENST00000311487 PXMP4Q9Y6I8 212 aa13.8□□□□□ -0.2
HMGA1-201ENST00000311487 C2orf70A6NJV1 201 aa13.8□□□□□ -0.2
HMGA1-201ENST00000311487 SEC14L6B5MCN3 397 aa13.8□□□□□ -0.2
HMGA1-201ENST00000311487 OR5G3P0C626 314 aa13.8□□□□□ -0.2
HMGA1-201ENST00000311487 FOLR2P14207 255 aa13.8□□□□□ -0.2
HMGA1-201ENST00000311487 RAB31Q13636 194 aa13.8□□□□□ -0.2
HMGA1-201ENST00000311487 DAZ1Q9NQZ3 744 aaKnown RBP13.8□□□□□ -0.2
HMGA1-201ENST00000311487 MGAM2Q2M2H8 2515 aa13.79□□□□□ -0.2
HMGA1-201ENST00000311487 WI2-2373I1.2A0A1W2PRP0 233 aa13.79□□□□□ -0.2
HMGA1-201ENST00000311487 M0R036 132 aa13.79□□□□□ -0.2
HMGA1-201ENST00000311487 IFNA1P01562 189 aa13.79□□□□□ -0.2
HMGA1-201ENST00000311487 CSN3P07498 182 aa13.79□□□□□ -0.2
HMGA1-201ENST00000311487 CBLN1P23435 193 aa13.79□□□□□ -0.2
HMGA1-201ENST00000311487 CEBPGP53567 150 aa13.79□□□□□ -0.2
HMGA1-201ENST00000311487 OXLD1Q5BKU9 147 aa13.79□□□□□ -0.2
HMGA1-201ENST00000311487 ELOVL1Q9BW60 279 aa13.79□□□□□ -0.2
HMGA1-201ENST00000311487 IGKV3-7A0A075B6H7 116 aa13.78□□□□□ -0.2
HMGA1-201ENST00000311487 C7orf77A4D0Y5 90 aa13.78□□□□□ -0.2
HMGA1-201ENST00000311487 LGALS9O00182 355 aa13.78□□□□□ -0.2
HMGA1-201ENST00000311487 AKR1C3P42330 323 aa13.78□□□□□ -0.2
HMGA1-201ENST00000311487 CDC34P49427 236 aaPredicted RBP13.78□□□□□ -0.2
HMGA1-201ENST00000311487 TMPRSS5Q9H3S3 457 aa13.78□□□□□ -0.2
HMGA1-201ENST00000311487 RPS10P5Q9NQ39 176 aa13.78□□□□□ -0.2
HMGA1-201ENST00000311487 VAX2Q9UIW0 290 aa13.78□□□□□ -0.2
HMGA1-201ENST00000311487 UFC1Q9Y3C8 167 aa13.78□□□□□ -0.2
HMGA1-201ENST00000311487 PATE2Q6UY27 113 aa13.78□□□□□ -0.2
HMGA1-201ENST00000311487 REC114Q7Z4M0 266 aa13.78□□□□□ -0.2
HMGA1-201ENST00000311487 PEMTQ9UBM1 199 aa13.78□□□□□ -0.2
HMGA1-201ENST00000311487 FABP1P07148 127 aa13.77□□□□□ -0.21
HMGA1-201ENST00000311487 SNRPCP09234 159 aaKnown RBP13.77□□□□□ -0.21
HMGA1-201ENST00000311487 NPPCP23582 126 aa13.77□□□□□ -0.21
HMGA1-201ENST00000311487 PRR20EP86478 221 aa13.77□□□□□ -0.21
HMGA1-201ENST00000311487 PRR20CP86479 221 aa13.77□□□□□ -0.21
HMGA1-201ENST00000311487 PRR20DP86480 221 aa13.77□□□□□ -0.21
HMGA1-201ENST00000311487 PRR20BP86481 221 aa13.77□□□□□ -0.21
HMGA1-201ENST00000311487 PRR20AP86496 221 aa13.77□□□□□ -0.21
HMGA1-201ENST00000311487 TMEM37Q8WXS4 190 aa13.77□□□□□ -0.21
HMGA1-201ENST00000311487 METTL26Q96S19 204 aa13.77□□□□□ -0.21
HMGA1-201ENST00000311487 KCNIP2Q9NS61 270 aa13.77□□□□□ -0.21
HMGA1-201ENST00000311487 MLXQ9UH92 298 aa13.77□□□□□ -0.21
HMGA1-201ENST00000311487 H3BQ15 152 aa13.76□□□□□ -0.21
HMGA1-201ENST00000311487 RHEBQ15382 184 aa13.76□□□□□ -0.21
HMGA1-201ENST00000311487 MORN5Q5VZ52 161 aa13.76□□□□□ -0.21
HMGA1-201ENST00000311487 FAM90A2PQ658T7 463 aa13.76□□□□□ -0.21
HMGA1-201ENST00000311487 RHPN1-AS1Q9BWJ2 59 aa13.76□□□□□ -0.21
HMGA1-201ENST00000311487 SMCO4Q9NRQ5 59 aa13.76□□□□□ -0.21
HMGA1-201ENST00000311487 RABAC1Q9UI14 185 aa13.76□□□□□ -0.21
HMGA1-201ENST00000311487 A8MWP6 167 aa13.76□□□□□ -0.21
HMGA1-201ENST00000311487 RPL29P47914 159 aaKnown RBP13.76□□□□□ -0.21
HMGA1-201ENST00000311487 SELENOTP62341 195 aa13.76□□□□□ -0.21
HMGA1-201ENST00000311487 WFDC9Q8NEX5 89 aa13.76□□□□□ -0.21
HMGA1-201ENST00000311487 RNF2Q99496 336 aa13.76□□□□□ -0.21
HMGA1-201ENST00000311487 IGHV7-4-1A0A0J9YVY3 117 aa13.75□□□□□ -0.21
HMGA1-201ENST00000311487 IZUMO1RA6ND01 250 aa13.75□□□□□ -0.21
HMGA1-201ENST00000311487 HYPMO75409 117 aa13.75□□□□□ -0.21
HMGA1-201ENST00000311487 C12orf57Q99622 126 aa13.75□□□□□ -0.21
HMGA1-201ENST00000311487 NOTCH1P46531 2555 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms