RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 CT83Q5H943 113 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 Q5PR19 223 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 SFTA2Q6UW10 78 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 CCL19Q99731 98 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 IGKV3OR2-268A0A0C4DH90 116 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 PDE6HQ13956 83 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 LINC00473A8K010 186 aa10.8□□□□□ -0.68
SNED1-201ENST00000310397 ITGB1BP1O14713 200 aa10.8□□□□□ -0.68
SNED1-201ENST00000310397 DSCAML1Q8TD84 2053 aa10.8□□□□□ -0.68
SNED1-201ENST00000310397 LTBRP36941 435 aa10.8□□□□□ -0.68
SNED1-201ENST00000310397 SRSF6Q13247 344 aaKnown RBP10.8□□□□□ -0.68
SNED1-201ENST00000310397 SRSF8Q9BRL6 282 aaKnown RBP10.8□□□□□ -0.68
SNED1-201ENST00000310397 PSG3Q16557 428 aa10.8□□□□□ -0.68
SNED1-201ENST00000310397 Q6ZRM9 215 aa10.8□□□□□ -0.68
SNED1-201ENST00000310397 TMEM167AQ8TBQ9 72 aa10.8□□□□□ -0.68
SNED1-201ENST00000310397 DUSP14O95147 198 aaKnown RBP10.8□□□□□ -0.68
SNED1-201ENST00000310397 CKS1BP61024 79 aa10.8□□□□□ -0.68
SNED1-201ENST00000310397 TRAV2A0A0B4J234 112 aa10.8□□□□□ -0.68
SNED1-201ENST00000310397 IL18BPO95998 194 aa10.8□□□□□ -0.68
SNED1-201ENST00000310397 LINC01560Q8TB33 94 aa10.8□□□□□ -0.68
SNED1-201ENST00000310397 IGHV3OR16-8A0A075B7F1 116 aa10.79□□□□□ -0.68
SNED1-201ENST00000310397 ATXN8Q156A1 80 aa10.79□□□□□ -0.68
SNED1-201ENST00000310397 SCRT1Q9BWW7 348 aa10.79□□□□□ -0.68
SNED1-201ENST00000310397 MESP1Q9BRJ9 268 aa10.79□□□□□ -0.68
SNED1-201ENST00000310397 SNHG12Q9BXW3 62 aa10.79□□□□□ -0.68
SNED1-201ENST00000310397 SIGLEC15Q6ZMC9 328 aa10.79□□□□□ -0.68
SNED1-201ENST00000310397 SPAG8Q99932 426 aaPredicted RBP10.79□□□□□ -0.68
SNED1-201ENST00000310397 C11orf68Q9H3H3 251 aaKnown RBP10.79□□□□□ -0.68
SNED1-201ENST00000310397 M0R2P5 195 aa10.79□□□□□ -0.68
SNED1-201ENST00000310397 IGHV1-46P01743 117 aa10.79□□□□□ -0.68
SNED1-201ENST00000310397 RNF144BQ7Z419 303 aa10.79□□□□□ -0.68
SNED1-201ENST00000310397 SLX1AQ9BQ83 275 aa10.79□□□□□ -0.68
SNED1-201ENST00000310397 MMP23AO75900 390 aa10.79□□□□□ -0.68
SNED1-201ENST00000310397 LYZL1Q6UWQ5 148 aa10.79□□□□□ -0.68
SNED1-201ENST00000310397 A0A0G2JRQ6 117 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 NTN3O00634 580 aaPredicted RBP10.78□□□□□ -0.68
SNED1-201ENST00000310397 MORN3Q6PF18 240 aaPredicted RBP10.78□□□□□ -0.68
SNED1-201ENST00000310397 PLSCR4Q9NRQ2 329 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 SLC25A15Q9Y619 301 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 ZNF138P52744 262 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 PAX8Q06710 450 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 GTSCR1Q86UQ5 136 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 RNASE6Q93091 150 aaKnown RBP10.78□□□□□ -0.68
SNED1-201ENST00000310397 C5orf63A6NC05 138 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 H0YJW9 148 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 EREGO14944 169 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 COX6B1P14854 86 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 TIMM23O14925 209 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 SLC25A20O43772 301 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 CD33P20138 364 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 C20orf204Q6ZNR8 217 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 KLHDC3Q9BQ90 382 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 TMEM14BQ9NUH8 114 aa10.78□□□□□ -0.68
SNED1-201ENST00000310397 IGHV2-26A0A0B4J1V2 119 aa10.77□□□□□ -0.68
SNED1-201ENST00000310397 TRAV3A0A0B4J244 114 aa10.77□□□□□ -0.68
SNED1-201ENST00000310397 CSPG4Q6UVK1 2322 aa10.77□□□□□ -0.68
SNED1-201ENST00000310397 TMEM200BQ69YZ2 307 aa10.77□□□□□ -0.69
SNED1-201ENST00000310397 PLEKHB2Q96CS7 222 aa10.77□□□□□ -0.69
SNED1-201ENST00000310397 TRGV11A0A075B6L2 103 aa10.77□□□□□ -0.69
SNED1-201ENST00000310397 PINLYPA6NC86 204 aa10.77□□□□□ -0.69
SNED1-201ENST00000310397 TOMM7Q9P0U1 55 aa10.77□□□□□ -0.69
SNED1-201ENST00000310397 OOSP1A8MZH6 123 aa10.77□□□□□ -0.69
SNED1-201ENST00000310397 SMAD7O15105 426 aaKnown RBP10.77□□□□□ -0.69
SNED1-201ENST00000310397 IGHV1-8P0DP01 117 aa10.77□□□□□ -0.69
SNED1-201ENST00000310397 PPIFP30405 207 aaKnown RBP10.77□□□□□ -0.69
SNED1-201ENST00000310397 OCIAD2Q56VL3 154 aa10.77□□□□□ -0.69
SNED1-201ENST00000310397 CD177Q8N6Q3 437 aa10.77□□□□□ -0.69
SNED1-201ENST00000310397 LINC01587Q99440 93 aa10.77□□□□□ -0.69
SNED1-201ENST00000310397 CST9LQ9H4G1 147 aa10.77□□□□□ -0.69
SNED1-201ENST00000310397 IGKV2-40A0A087WW87 121 aaPredicted RBP10.76□□□□□ -0.69
SNED1-201ENST00000310397 IGKV2D-40P01614 121 aaPredicted RBP10.76□□□□□ -0.69
SNED1-201ENST00000310397 ZNF329Q86UD4 541 aa10.76□□□□□ -0.69
SNED1-201ENST00000310397 TFF1P04155 84 aa10.76□□□□□ -0.69
SNED1-201ENST00000310397 CD28P10747 220 aa10.76□□□□□ -0.69
SNED1-201ENST00000310397 C18orf32Q8TCD1 76 aa10.76□□□□□ -0.69
SNED1-201ENST00000310397 FAM168AQ92567 244 aa10.76□□□□□ -0.69
SNED1-201ENST00000310397 GTSF1LQ9H1H1 148 aa10.76□□□□□ -0.69
SNED1-201ENST00000310397 PEMTQ9UBM1 199 aa10.76□□□□□ -0.69
SNED1-201ENST00000310397 SPG11Q96JI7 2443 aa10.76□□□□□ -0.69
SNED1-201ENST00000310397 DMRTC2Q8IXT2 367 aaPredicted RBP10.76□□□□□ -0.69
SNED1-201ENST00000310397 LINC00477Q96M19 166 aa10.76□□□□□ -0.69
SNED1-201ENST00000310397 GGTLC3B5MD39 225 aa10.76□□□□□ -0.69
SNED1-201ENST00000310397 CDKN1AP38936 164 aa10.76□□□□□ -0.69
SNED1-201ENST00000310397 CD300EQ496F6 205 aaPredicted RBP10.76□□□□□ -0.69
SNED1-201ENST00000310397 RNASE2P10153 161 aaKnown RBP10.76□□□□□ -0.69
SNED1-201ENST00000310397 C15orf32Q32M92 178 aa10.76□□□□□ -0.69
SNED1-201ENST00000310397 ARTNQ5T4W7 220 aa10.76□□□□□ -0.69
SNED1-201ENST00000310397 ARHGAP32A7KAX9 2087 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 TRBV7-1A0A0A6YYK4 115 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 LYPD6BQ8NI32 183 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 LIME1Q9H400 295 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 VCYO14598 125 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 SORL1Q92673 2214 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 NCR2O95944 276 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 CSRP2Q16527 193 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 DPH3P1Q9H4G8 78 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 YPEL3P61236 119 aaPredicted RBP10.75□□□□□ -0.69
SNED1-201ENST00000310397 MINOS1Q5TGZ0 78 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 ZNF562Q6V9R5 426 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 ITLN2Q8WWU7 325 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms