RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 CT45A1Q5HYN5 189 aa8.83□□□□□ -1
LSM3-201ENST00000306024 ZNF843Q8N446 348 aa8.83□□□□□ -1
LSM3-201ENST00000306024 CT45A3Q8NHU0 189 aa8.83□□□□□ -1
LSM3-201ENST00000306024 FLYWCH2Q96CP2 140 aaKnown RBP8.83□□□□□ -1
LSM3-201ENST00000306024 FGF23Q9GZV9 251 aaPredicted RBP8.83□□□□□ -1
LSM3-201ENST00000306024 LSM4Q9Y4Z0 139 aaKnown RBP8.83□□□□□ -1
LSM3-201ENST00000306024 SHISA9B4DS77 424 aa8.83□□□□□ -1
LSM3-201ENST00000306024 ZNF497Q6ZNH5 498 aa8.83□□□□□ -1
LSM3-201ENST00000306024 TEX45Q8NA69 505 aa8.83□□□□□ -1
LSM3-201ENST00000306024 SLC25A10Q9UBX3 287 aaPredicted RBP8.83□□□□□ -1
LSM3-201ENST00000306024 TRBV6-6A0A0A6YYG2 114 aa8.83□□□□□ -1
LSM3-201ENST00000306024 GGTLC3B5MD39 225 aa8.83□□□□□ -1
LSM3-201ENST00000306024 MGST3O14880 152 aa8.83□□□□□ -1
LSM3-201ENST00000306024 CACNG7P62955 275 aa8.83□□□□□ -1
LSM3-201ENST00000306024 BBC3Q96PG8 261 aaPredicted RBP8.83□□□□□ -1
LSM3-201ENST00000306024 WDFY3Q8IZQ1 3526 aa8.82□□□□□ -1
LSM3-201ENST00000306024 PGPA6NDG6 321 aa8.82□□□□□ -1
LSM3-201ENST00000306024 SRRM5B3KS81 715 aa8.82□□□□□ -1
LSM3-201ENST00000306024 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.82□□□□□ -1
LSM3-201ENST00000306024 PRSS1P07477 247 aa8.82□□□□□ -1
LSM3-201ENST00000306024 ORM2P19652 201 aa8.82□□□□□ -1
LSM3-201ENST00000306024 GNG5P63218 68 aa8.82□□□□□ -1
LSM3-201ENST00000306024 GCSAMQ8N6F7 178 aa8.82□□□□□ -1
LSM3-201ENST00000306024 MRAP2Q96G30 205 aa8.82□□□□□ -1
LSM3-201ENST00000306024 ATP5L2Q7Z4Y8 100 aa8.82□□□□□ -1
LSM3-201ENST00000306024 OR9G4Q8NGQ1 327 aa8.82□□□□□ -1
LSM3-201ENST00000306024 ZNF414Q96IQ9 312 aa8.82□□□□□ -1
LSM3-201ENST00000306024 RPP21Q9H633 154 aaKnown RBP8.82□□□□□ -1
LSM3-201ENST00000306024 LINC00473A8K010 186 aa8.82□□□□□ -1
LSM3-201ENST00000306024 F2RL2O00254 374 aa8.82□□□□□ -1
LSM3-201ENST00000306024 LY6HO94772 140 aa8.82□□□□□ -1
LSM3-201ENST00000306024 RIGQ13278 110 aa8.82□□□□□ -1
LSM3-201ENST00000306024 KLF5Q13887 457 aaPredicted RBP8.82□□□□□ -1
LSM3-201ENST00000306024 C10orf113Q5VZT2 155 aa8.82□□□□□ -1
LSM3-201ENST00000306024 PRSS57Q6UWY2 283 aa8.82□□□□□ -1
LSM3-201ENST00000306024 WFDC3Q8IUB2 231 aa8.82□□□□□ -1
LSM3-201ENST00000306024 FAM216BQ8N7L0 139 aa8.82□□□□□ -1
LSM3-201ENST00000306024 DOPEY1Q5JWR5 2465 aa8.82□□□□□ -1
LSM3-201ENST00000306024 ABCA1O95477 2261 aa8.81□□□□□ -1
LSM3-201ENST00000306024 TRAV5A0A0B4J249 113 aa8.81□□□□□ -1
LSM3-201ENST00000306024 hADV38S2A0JD32 116 aa8.81□□□□□ -1
LSM3-201ENST00000306024 NPIPB11E5RHQ5 1161 aa8.81□□□□□ -1
LSM3-201ENST00000306024 PYYP10082 97 aa8.81□□□□□ -1
LSM3-201ENST00000306024 CFAP161Q6P656 301 aa8.81□□□□□ -1
LSM3-201ENST00000306024 BCL6BQ8N143 479 aaPredicted RBP8.81□□□□□ -1
LSM3-201ENST00000306024 JMJD8Q96S16 334 aa8.81□□□□□ -1
LSM3-201ENST00000306024 NAV2Q8IVL1 2488 aa8.81□□□□□ -1
LSM3-201ENST00000306024 HSPE1P61604 102 aaKnown RBP8.81□□□□□ -1
LSM3-201ENST00000306024 HES4Q9HCC6 221 aa8.81□□□□□ -1
LSM3-201ENST00000306024 H3BTX0 84 aa8.81□□□□□ -1
LSM3-201ENST00000306024 SMAD7O15105 426 aaKnown RBP8.81□□□□□ -1
LSM3-201ENST00000306024 OR1L4Q8NGR5 311 aa8.8□□□□□ -1
LSM3-201ENST00000306024 CSPG4Q6UVK1 2322 aa8.8□□□□□ -1
LSM3-201ENST00000306024 TRAV3A0A0B4J244 114 aa8.8□□□□□ -1
LSM3-201ENST00000306024 IGLV2-14P01704 120 aa8.8□□□□□ -1
LSM3-201ENST00000306024 REG1BP48304 166 aa8.8□□□□□ -1
LSM3-201ENST00000306024 ATP5J2P56134 94 aa8.8□□□□□ -1
LSM3-201ENST00000306024 ERHP84090 104 aaKnown RBP8.8□□□□□ -1
LSM3-201ENST00000306024 RBPMS2Q6ZRY4 209 aaKnown RBP8.8□□□□□ -1
LSM3-201ENST00000306024 IDI2-AS1Q9NZ38 188 aa8.8□□□□□ -1
LSM3-201ENST00000306024 IGHV3-48P01763 117 aa8.8□□□□□ -1
LSM3-201ENST00000306024 SPINK8P0C7L1 97 aa8.8□□□□□ -1
LSM3-201ENST00000306024 ZNF146Q15072 292 aa8.8□□□□□ -1
LSM3-201ENST00000306024 RPL39P5Q59GN2 51 aa8.8□□□□□ -1
LSM3-201ENST00000306024 NEU4Q8WWR8 484 aaPredicted RBP8.8□□□□□ -1
LSM3-201ENST00000306024 CCL19Q99731 98 aa8.8□□□□□ -1
LSM3-201ENST00000306024 ANAPC13Q9BS18 74 aa8.8□□□□□ -1
LSM3-201ENST00000306024 PSPNO60542 156 aa8.79□□□□□ -1
LSM3-201ENST00000306024 COL8A2P25067 703 aa8.79□□□□□ -1
LSM3-201ENST00000306024 FAM90A1Q86YD7 464 aa8.79□□□□□ -1
LSM3-201ENST00000306024 ZNF479Q96JC4 524 aa8.79□□□□□ -1
LSM3-201ENST00000306024 C18orf15Q96N68 181 aa8.79□□□□□ -1
LSM3-201ENST00000306024 DCTN5Q9BTE1 182 aa8.79□□□□□ -1
LSM3-201ENST00000306024 METRNQ9UJH8 293 aa8.79□□□□□ -1
LSM3-201ENST00000306024 ATMQ13315 3056 aa8.79□□□□□ -1
LSM3-201ENST00000306024 J3QKU1 62 aa8.79□□□□□ -1
LSM3-201ENST00000306024 SH2D6Q7Z4S9 175 aa8.79□□□□□ -1
LSM3-201ENST00000306024 C19orf84I3L1E1 186 aa8.79□□□□□ -1
LSM3-201ENST00000306024 OR2J3O76001 311 aa8.79□□□□□ -1
LSM3-201ENST00000306024 CNIH1O95406 144 aa8.79□□□□□ -1
LSM3-201ENST00000306024 FXYD7P58549 80 aa8.79□□□□□ -1
LSM3-201ENST00000306024 GAGE13Q4V321 117 aa8.79□□□□□ -1
LSM3-201ENST00000306024 SPRNQ5BIV9 151 aa8.79□□□□□ -1
LSM3-201ENST00000306024 OR9G1Q8NH87 305 aa8.79□□□□□ -1
LSM3-201ENST00000306024 WIPF2Q8TF74 440 aaPredicted RBP8.79□□□□□ -1
LSM3-201ENST00000306024 SS18L2Q9UHA2 77 aa8.79□□□□□ -1
LSM3-201ENST00000306024 DSCAMO60469 2012 aa8.79□□□□□ -1
LSM3-201ENST00000306024 APOMO95445 188 aa8.78□□□□□ -1
LSM3-201ENST00000306024 CT45A10P0DMU9 189 aa8.78□□□□□ -1
LSM3-201ENST00000306024 FCGR2BP31994 310 aaPredicted RBP8.78□□□□□ -1
LSM3-201ENST00000306024 GDF5OSQ5U4N7 250 aa8.78□□□□□ -1
LSM3-201ENST00000306024 PRNTQ86SH4 94 aa8.78□□□□□ -1
LSM3-201ENST00000306024 SRSF12Q8WXF0 261 aaKnown RBP8.78□□□□□ -1
LSM3-201ENST00000306024 ARPC1AQ92747 370 aa8.78□□□□□ -1
LSM3-201ENST00000306024 VGLL1Q99990 258 aa8.78□□□□□ -1
LSM3-201ENST00000306024 C19orf24Q9BVV8 132 aa8.78□□□□□ -1
LSM3-201ENST00000306024 CYSLTR1Q9Y271 337 aa8.78□□□□□ -1
LSM3-201ENST00000306024 SOX21Q9Y651 276 aaPredicted RBP8.78□□□□□ -1
LSM3-201ENST00000306024 TMSB15BA0A087X1C1 80 aa8.78□□□□□ -1
LSM3-201ENST00000306024 Q6P435 159 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms