RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 C1orf194Q5T5A4 169 aa20.47■□□□□ 0.87
HDAC3-201ENST00000305264 OR8I2Q8N0Y5 310 aa20.47■□□□□ 0.87
HDAC3-201ENST00000305264 TECRQ9NZ01 308 aaKnown RBP20.47■□□□□ 0.87
HDAC3-201ENST00000305264 MGAM2Q2M2H8 2515 aa20.47■□□□□ 0.87
HDAC3-201ENST00000305264 EIF5AL1Q6IS14 154 aaKnown RBP20.46■□□□□ 0.87
HDAC3-201ENST00000305264 FHITP49789 147 aa20.46■□□□□ 0.87
HDAC3-201ENST00000305264 ALKAL2Q6UX46 152 aa20.46■□□□□ 0.87
HDAC3-201ENST00000305264 SSX7Q7RTT5 188 aa20.46■□□□□ 0.87
HDAC3-201ENST00000305264 TCF24Q7RTU0 167 aa20.46■□□□□ 0.87
HDAC3-201ENST00000305264 TMEM61Q8N0U2 210 aa20.46■□□□□ 0.87
HDAC3-201ENST00000305264 SLC25A2Q9BXI2 301 aa20.46■□□□□ 0.87
HDAC3-201ENST00000305264 CDC34P49427 236 aaPredicted RBP20.45■□□□□ 0.86
HDAC3-201ENST00000305264 INSL3P51460 131 aa20.45■□□□□ 0.86
HDAC3-201ENST00000305264 FAM74A1Q5RGS3 127 aa20.45■□□□□ 0.86
HDAC3-201ENST00000305264 FAM90A2PQ658T7 463 aa20.45■□□□□ 0.86
HDAC3-201ENST00000305264 A0A1W2PPV4 95 aa20.45■□□□□ 0.86
HDAC3-201ENST00000305264 IZUMO1RA6ND01 250 aa20.45■□□□□ 0.86
HDAC3-201ENST00000305264 ZNF726P1Q15940 193 aa20.45■□□□□ 0.86
HDAC3-201ENST00000305264 OXLD1Q5BKU9 147 aa20.45■□□□□ 0.86
HDAC3-201ENST00000305264 SIGLEC15Q6ZMC9 328 aa20.45■□□□□ 0.86
HDAC3-201ENST00000305264 FAM167A-AS1Q96KT0 104 aa20.45■□□□□ 0.86
HDAC3-201ENST00000305264 IGKV3-7A0A075B6H7 116 aa20.44■□□□□ 0.86
HDAC3-201ENST00000305264 UMAD1C9J7I0 102 aa20.44■□□□□ 0.86
HDAC3-201ENST00000305264 HMGB3O15347 200 aaKnown RBP20.44■□□□□ 0.86
HDAC3-201ENST00000305264 PHYHIPLQ96FC7 376 aa20.44■□□□□ 0.86
HDAC3-201ENST00000305264 RAB24Q969Q5 203 aa20.43■□□□□ 0.86
HDAC3-201ENST00000305264 MRPS12O15235 138 aaKnown RBP20.43■□□□□ 0.86
HDAC3-201ENST00000305264 RPL11P62913 178 aaKnown RBP20.43■□□□□ 0.86
HDAC3-201ENST00000305264 ACTR3CQ9C0K3 210 aaPredicted RBP20.42■□□□□ 0.86
HDAC3-201ENST00000305264 SMAD5-AS1Q9Y6J3 95 aa20.42■□□□□ 0.86
HDAC3-201ENST00000305264 WIPF1O43516 503 aa20.41■□□□□ 0.86
HDAC3-201ENST00000305264 GP9P14770 177 aa20.41■□□□□ 0.86
HDAC3-201ENST00000305264 RPL7P18124 248 aaKnown RBP20.41■□□□□ 0.86
HDAC3-201ENST00000305264 FAM213BQ8TBF2 198 aa20.41■□□□□ 0.86
HDAC3-201ENST00000305264 HELTA6NFD8 242 aa20.41■□□□□ 0.86
HDAC3-201ENST00000305264 SNRPCP09234 159 aaKnown RBP20.41■□□□□ 0.86
HDAC3-201ENST00000305264 PYYP10082 97 aa20.41■□□□□ 0.86
HDAC3-201ENST00000305264 SULT1A2P50226 295 aa20.41■□□□□ 0.86
HDAC3-201ENST00000305264 RBPMS2Q6ZRY4 209 aaKnown RBP20.41■□□□□ 0.86
HDAC3-201ENST00000305264 BPIFA4PQ86YQ2 179 aa20.41■□□□□ 0.86
HDAC3-201ENST00000305264 GPR82Q96P67 336 aa20.41■□□□□ 0.86
HDAC3-201ENST00000305264 RNF24Q9Y225 148 aa20.41■□□□□ 0.86
HDAC3-201ENST00000305264 ZNF503Q96F45 646 aa20.4■□□□□ 0.86
HDAC3-201ENST00000305264 C17orf77Q96MU5 243 aa20.4■□□□□ 0.86
HDAC3-201ENST00000305264 GALR1P47211 349 aa20.39■□□□□ 0.86
HDAC3-201ENST00000305264 KHDC3LQ587J8 217 aa20.39■□□□□ 0.86
HDAC3-201ENST00000305264 GBGT1Q8N5D6 347 aa20.39■□□□□ 0.86
HDAC3-201ENST00000305264 CTXND1A0A1B0GTU2 59 aa20.39■□□□□ 0.85
HDAC3-201ENST00000305264 OR7C2O60412 319 aa20.39■□□□□ 0.85
HDAC3-201ENST00000305264 TAS2R45P59539 299 aa20.39■□□□□ 0.85
HDAC3-201ENST00000305264 STXBP6Q8NFX7 210 aa20.39■□□□□ 0.85
HDAC3-201ENST00000305264 OR2K2Q8NGT1 345 aa20.39■□□□□ 0.85
HDAC3-201ENST00000305264 GPR61Q9BZJ8 451 aa20.39■□□□□ 0.85
HDAC3-201ENST00000305264 G3V4G9 280 aa20.38■□□□□ 0.85
HDAC3-201ENST00000305264 TSPAN4O14817 238 aa20.38■□□□□ 0.85
HDAC3-201ENST00000305264 CD5P06127 495 aa20.38■□□□□ 0.85
HDAC3-201ENST00000305264 TEX261Q6UWH6 196 aa20.38■□□□□ 0.85
HDAC3-201ENST00000305264 MS4A6AQ9H2W1 248 aa20.38■□□□□ 0.85
HDAC3-201ENST00000305264 STAG3L2P0CL84 134 aa20.37■□□□□ 0.85
HDAC3-201ENST00000305264 STAG3L3P0CL85 134 aa20.37■□□□□ 0.85
HDAC3-201ENST00000305264 LCN12Q6JVE5 192 aa20.37■□□□□ 0.85
HDAC3-201ENST00000305264 TMEM14CQ9P0S9 112 aa20.37■□□□□ 0.85
HDAC3-201ENST00000305264 TRAV25A0A0B4J276 109 aa20.37■□□□□ 0.85
HDAC3-201ENST00000305264 OR10J4P0C629 311 aa20.37■□□□□ 0.85
HDAC3-201ENST00000305264 ARL14EPLP0DKL9 152 aa20.37■□□□□ 0.85
HDAC3-201ENST00000305264 IGLC2P0DOY2 106 aa20.37■□□□□ 0.85
HDAC3-201ENST00000305264 TFPI2P48307 235 aa20.37■□□□□ 0.85
HDAC3-201ENST00000305264 RAB5CP51148 216 aa20.37■□□□□ 0.85
HDAC3-201ENST00000305264 DPPA3Q6W0C5 159 aa20.37■□□□□ 0.85
HDAC3-201ENST00000305264 PAXXQ9BUH6 204 aa20.37■□□□□ 0.85
HDAC3-201ENST00000305264 OR51M1Q9H341 326 aa20.37■□□□□ 0.85
HDAC3-201ENST00000305264 NBEAL1Q6ZS30 2694 aa20.37■□□□□ 0.85
HDAC3-201ENST00000305264 NOTCH1P46531 2555 aa20.37■□□□□ 0.85
HDAC3-201ENST00000305264 SORL1Q92673 2214 aa20.36■□□□□ 0.85
HDAC3-201ENST00000305264 H3BQ15 152 aa20.36■□□□□ 0.85
HDAC3-201ENST00000305264 H3BTX0 84 aa20.36■□□□□ 0.85
HDAC3-201ENST00000305264 ATF4P18848 351 aaPredicted RBP20.36■□□□□ 0.85
HDAC3-201ENST00000305264 LCN15Q6UWW0 184 aa20.36■□□□□ 0.85
HDAC3-201ENST00000305264 NRN1Q9NPD7 142 aa20.36■□□□□ 0.85
HDAC3-201ENST00000305264 ZNF785A8K8V0 405 aa20.35■□□□□ 0.85
HDAC3-201ENST00000305264 GUCA2BQ16661 112 aa20.35■□□□□ 0.85
HDAC3-201ENST00000305264 SAMD5Q5TGI4 173 aa20.35■□□□□ 0.85
HDAC3-201ENST00000305264 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.35■□□□□ 0.85
HDAC3-201ENST00000305264 MAP1LC3B2A6NCE7 125 aa20.35■□□□□ 0.85
HDAC3-201ENST00000305264 FGF8P55075 233 aaPredicted RBP20.35■□□□□ 0.85
HDAC3-201ENST00000305264 WFDC3Q8IUB2 231 aa20.35■□□□□ 0.85
HDAC3-201ENST00000305264 FXYD5Q96DB9 178 aa20.35■□□□□ 0.85
HDAC3-201ENST00000305264 SPAG8Q99932 426 aaPredicted RBP20.35■□□□□ 0.85
HDAC3-201ENST00000305264 MAP1LC3BQ9GZQ8 125 aa20.35■□□□□ 0.85
HDAC3-201ENST00000305264 PQLC2Q6ZP29 291 aa20.34■□□□□ 0.85
HDAC3-201ENST00000305264 ZNF680Q8NEM1 530 aa20.34■□□□□ 0.85
HDAC3-201ENST00000305264 DCANP1Q8TF63 244 aa20.34■□□□□ 0.85
HDAC3-201ENST00000305264 ZNF586Q9NXT0 402 aa20.34■□□□□ 0.85
HDAC3-201ENST00000305264 A0A087X0K7 114 aa20.34■□□□□ 0.85
HDAC3-201ENST00000305264 UBE2L3P68036 154 aaKnown RBP20.34■□□□□ 0.85
HDAC3-201ENST00000305264 HRH4Q9H3N8 390 aa20.34■□□□□ 0.85
HDAC3-201ENST00000305264 RNF141Q8WVD5 230 aa20.33■□□□□ 0.84
HDAC3-201ENST00000305264 DNASE2O00115 360 aaPredicted RBP20.32■□□□□ 0.84
HDAC3-201ENST00000305264 ZNF256Q9Y2P7 627 aaPredicted RBP20.32■□□□□ 0.84
HDAC3-201ENST00000305264 ZNF705EA8MWA4 302 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms