RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 USF2Q15853 346 aaPredicted RBP11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 CENPWQ5EE01 88 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 OCC1Q8TAD7 63 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 VPS13CQ709C8 3753 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 TRBV9A0A0B4J1U6 114 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 WI2-2373I1.2A0A1W2PRP0 233 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 H3BRN7 92 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 PPP1R2P9O14990 202 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 MGST1P10620 155 aaKnown RBP11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 ZNF329Q86UD4 541 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 IGHV3OR16-8A0A075B7F1 116 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 F8W735 103 aaPredicted RBP11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 PEX7O00628 323 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 ELOBQ15370 118 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 WFDC11Q8NEX6 87 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 FAM223BA6NKX1 122 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 C9JCJ5 164 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 KCNIP4Q6PIL6 250 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 FAM223AQ8IWN6 122 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 ZFP82Q8N141 532 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 Q9H3A6 140 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 TMEM14CQ9P0S9 112 aa11.32□□□□□ -0.6
SHCBP1-201ENST00000303383 TENM4Q6N022 2769 aa11.31□□□□□ -0.6
SHCBP1-201ENST00000303383 APCP25054 2843 aa11.31□□□□□ -0.6
SHCBP1-201ENST00000303383 TRBV20OR9-2A0A075B6H5 130 aa11.31□□□□□ -0.6
SHCBP1-201ENST00000303383 IGF1P05019 195 aa11.31□□□□□ -0.6
SHCBP1-201ENST00000303383 RAB4AP20338 218 aa11.31□□□□□ -0.6
SHCBP1-201ENST00000303383 OR8I2Q8N0Y5 310 aa11.31□□□□□ -0.6
SHCBP1-201ENST00000303383 SFRP2Q96HF1 295 aa11.31□□□□□ -0.6
SHCBP1-201ENST00000303383 CR1P17927 2039 aa11.31□□□□□ -0.6
SHCBP1-201ENST00000303383 TGIF2-C20orf24A0A0A6YYL0 155 aa11.31□□□□□ -0.6
SHCBP1-201ENST00000303383 TCEAL7Q9BRU2 100 aa11.31□□□□□ -0.6
SHCBP1-201ENST00000303383 GNG5P63218 68 aa11.3□□□□□ -0.6
SHCBP1-201ENST00000303383 OR10G8Q8NGN5 311 aa11.3□□□□□ -0.6
SHCBP1-201ENST00000303383 C2CD4CQ8TF44 421 aa11.3□□□□□ -0.6
SHCBP1-201ENST00000303383 C14orf144Q96I85 54 aa11.3□□□□□ -0.6
SHCBP1-201ENST00000303383 TLN2Q9Y4G6 2542 aa11.3□□□□□ -0.6
SHCBP1-201ENST00000303383 TGOLN2O43493 480 aa11.3□□□□□ -0.6
SHCBP1-201ENST00000303383 ADMP35318 185 aa11.3□□□□□ -0.6
SHCBP1-201ENST00000303383 IER3P46695 156 aa11.3□□□□□ -0.6
SHCBP1-201ENST00000303383 ERVFC1-1P60608 527 aa11.3□□□□□ -0.6
SHCBP1-201ENST00000303383 C5orf17Q8NAS9 161 aa11.3□□□□□ -0.6
SHCBP1-201ENST00000303383 EPDR1Q9UM22 224 aa11.3□□□□□ -0.6
SHCBP1-201ENST00000303383 FAM210BQ96KR6 192 aa11.3□□□□□ -0.6
SHCBP1-201ENST00000303383 CSMD2Q7Z408 3487 aa11.3□□□□□ -0.6
SHCBP1-201ENST00000303383 A0A1W2PPQ1 181 aa11.29□□□□□ -0.6
SHCBP1-201ENST00000303383 RPL7P18124 248 aaKnown RBP11.29□□□□□ -0.6
SHCBP1-201ENST00000303383 CRIP2P52943 208 aaPredicted RBP11.29□□□□□ -0.6
SHCBP1-201ENST00000303383 LY96Q9Y6Y9 160 aa11.29□□□□□ -0.6
SHCBP1-201ENST00000303383 TRAV34A0A0B4J273 112 aa11.29□□□□□ -0.6
SHCBP1-201ENST00000303383 CD99P14209 185 aa11.29□□□□□ -0.6
SHCBP1-201ENST00000303383 TEX29Q8N6K0 151 aa11.29□□□□□ -0.6
SHCBP1-201ENST00000303383 ZNF586Q9NXT0 402 aa11.29□□□□□ -0.6
SHCBP1-201ENST00000303383 CELSR1Q9NYQ6 3014 aa11.29□□□□□ -0.6
SHCBP1-201ENST00000303383 TOMM20LQ6UXN7 152 aa11.29□□□□□ -0.6
SHCBP1-201ENST00000303383 BAGE2Q86Y30 109 aa11.29□□□□□ -0.6
SHCBP1-201ENST00000303383 CCDC140Q96MF4 163 aa11.29□□□□□ -0.6
SHCBP1-201ENST00000303383 CLUHP3Q96NS8 147 aa11.29□□□□□ -0.6
SHCBP1-201ENST00000303383 AAMDCQ9H7C9 122 aa11.29□□□□□ -0.6
SHCBP1-201ENST00000303383 OTORQ9NRC9 128 aa11.29□□□□□ -0.6
SHCBP1-201ENST00000303383 CXCL1P09341 107 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 SRP14P37108 136 aaKnown RBP11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 WDR73Q6P4I2 378 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 LINC00479Q96M42 142 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 CDC42EP3Q9UKI2 254 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 VPREB3Q9UKI3 123 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 BMI1P35226 326 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 ARL3P36405 182 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 KRTAP1-3Q8IUG1 177 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 ZANQ9Y493 2812 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 H3BUA1 57 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 IGHV3-11P01762 117 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 S100A8P05109 93 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 FOLR2P14207 255 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 OR5I1Q13606 314 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 TEX38Q6PEX7 206 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 Q6ZS46 218 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 NHLRC2Q8NBF2 726 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 USMG5Q96IX5 58 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 ATG101Q9BSB4 218 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 SERTAD4Q9NUC0 356 aa11.28□□□□□ -0.6
SHCBP1-201ENST00000303383 A0A0G2JLM5 398 aa11.27□□□□□ -0.61
SHCBP1-201ENST00000303383 PPP5D1E7EU14 171 aa11.27□□□□□ -0.61
SHCBP1-201ENST00000303383 EXOC3-AS1Q8N2X6 119 aa11.27□□□□□ -0.61
SHCBP1-201ENST00000303383 SGK494Q96LW2 274 aa11.27□□□□□ -0.61
SHCBP1-201ENST00000303383 METTL26Q96S19 204 aa11.27□□□□□ -0.61
SHCBP1-201ENST00000303383 CSMD1Q96PZ7 3565 aa11.27□□□□□ -0.61
SHCBP1-201ENST00000303383 TRBV19A0A075B6N1 114 aa11.27□□□□□ -0.61
SHCBP1-201ENST00000303383 K7EQM0 130 aa11.27□□□□□ -0.61
SHCBP1-201ENST00000303383 KLK9Q2XQG4 91 aa11.27□□□□□ -0.61
SHCBP1-201ENST00000303383 PRSS22Q9GZN4 317 aa11.27□□□□□ -0.61
SHCBP1-201ENST00000303383 KLK9Q9UKQ9 250 aa11.27□□□□□ -0.61
SHCBP1-201ENST00000303383 HOXA3O43365 443 aaPredicted RBP11.26□□□□□ -0.61
SHCBP1-201ENST00000303383 RAB9AP51151 201 aa11.26□□□□□ -0.61
SHCBP1-201ENST00000303383 RPL15P61313 204 aaKnown RBP11.26□□□□□ -0.61
SHCBP1-201ENST00000303383 Q6YL49 198 aa11.26□□□□□ -0.61
SHCBP1-201ENST00000303383 CIARTQ8N365 385 aaPredicted RBP11.26□□□□□ -0.61
SHCBP1-201ENST00000303383 NPFFR1Q9GZQ6 430 aa11.26□□□□□ -0.61
SHCBP1-201ENST00000303383 ZNF785A8K8V0 405 aa11.26□□□□□ -0.61
SHCBP1-201ENST00000303383 K7EN84 100 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms