RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 IGHV1-46P01743 117 aa8.52□□□□□ -1.05
CLIP1-201ENST00000302528 EFNA4P52798 201 aa8.52□□□□□ -1.05
CLIP1-201ENST00000302528 RBM3P98179 157 aaKnown RBP8.52□□□□□ -1.05
CLIP1-201ENST00000302528 NABP1Q96AH0 204 aa8.52□□□□□ -1.05
CLIP1-201ENST00000302528 ID3Q02535 119 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 UBE2V1Q13404 147 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 LY6DQ14210 128 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 UTF1Q5T230 341 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 IGFL4Q6B9Z1 124 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 IGHV1-18A0A0C4DH31 117 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 A0A1B0GTI1 187 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 LOC105371267A0A1B0GV96 52 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 CFHR3Q02985 330 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 RMI2Q96E14 147 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 USMG5Q96IX5 58 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 RHPN1-AS1Q9BWJ2 59 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 TMEM242Q9NWH2 141 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 TRBV24-1A0A075B6N3 115 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 IGHV1-3A0A0C4DH29 117 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 C22orf46C9J442 243 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 SUPT4H1P63272 117 aaKnown RBP8.51□□□□□ -1.05
CLIP1-201ENST00000302528 MINOS1Q5TGZ0 78 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 ZNF329Q86UD4 541 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 NUP35Q8NFH5 326 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 TRGV9Q99603 122 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 RFNGQ9Y644 331 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 MINOS1-NBL1R4GNA1 71 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 E9PLN8 166 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 CXCL1P09341 107 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 C3orf79P0CE67 100 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 MORN5Q5VZ52 161 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 ESPL1Q14674 2120 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 SHISA3A0PJX4 238 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 EGR2P11161 476 aaPredicted RBP8.51□□□□□ -1.05
CLIP1-201ENST00000302528 MDS2Q8NDY4 140 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 WFDC1Q9HC57 220 aa8.51□□□□□ -1.05
CLIP1-201ENST00000302528 KNCNA6PVL3 124 aa8.5□□□□□ -1.05
CLIP1-201ENST00000302528 MPZP25189 248 aa8.5□□□□□ -1.05
CLIP1-201ENST00000302528 MYO16Q9Y6X6 1858 aa8.5□□□□□ -1.05
CLIP1-201ENST00000302528 A0A1W2PR77 199 aa8.5□□□□□ -1.05
CLIP1-201ENST00000302528 IGHG4P01861 327 aa8.5□□□□□ -1.05
CLIP1-201ENST00000302528 IGHV1-8P0DP01 117 aa8.5□□□□□ -1.05
CLIP1-201ENST00000302528 NBL1P41271 181 aa8.5□□□□□ -1.05
CLIP1-201ENST00000302528 RPUSD1Q9UJJ7 312 aaKnown RBP8.5□□□□□ -1.05
CLIP1-201ENST00000302528 MRPS18CQ9Y3D5 142 aaKnown RBP8.5□□□□□ -1.05
CLIP1-201ENST00000302528 OOSP1A8MZH6 123 aa8.5□□□□□ -1.05
CLIP1-201ENST00000302528 FOXG1P55316 489 aaPredicted RBP8.5□□□□□ -1.05
CLIP1-201ENST00000302528 DEFB131AP59861 70 aa8.5□□□□□ -1.05
CLIP1-201ENST00000302528 AMN1Q8IY45 258 aa8.5□□□□□ -1.05
CLIP1-201ENST00000302528 AGMATQ9BSE5 352 aa8.5□□□□□ -1.05
CLIP1-201ENST00000302528 ZNF883P0CG24 379 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 UBE2BP63146 152 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 ZNF236Q9UL36 1845 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 FAM223BA6NKX1 122 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 FAM223AQ8IWN6 122 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 PSPNO60542 156 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 TMEM200BQ69YZ2 307 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 MCRIP2Q9BUT9 160 aaKnown RBP8.49□□□□□ -1.05
CLIP1-201ENST00000302528 TP53TG1Q9Y2A0 90 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 ANK1P16157 1881 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 RNF5Q99942 180 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 TRBV20-1A0A075B6N2 111 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 RHODO00212 210 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 IL18BPO95998 194 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 LINC01551Q86U37 167 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 XCL2Q9UBD3 114 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 SIP14410 1827 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 BRWD3Q6RI45 1802 aa8.49□□□□□ -1.05
CLIP1-201ENST00000302528 TDRD15B5MCY1 1934 aaKnown RBP8.49□□□□□ -1.05
CLIP1-201ENST00000302528 IGHV3-16A0A0C4DH30 117 aa8.48□□□□□ -1.05
CLIP1-201ENST00000302528 SYNJ2BPP57105 145 aa8.48□□□□□ -1.05
CLIP1-201ENST00000302528 SPANXDQ9BXN6 97 aa8.48□□□□□ -1.05
CLIP1-201ENST00000302528 PRSS29PA6NIE9 313 aa8.48□□□□□ -1.05
CLIP1-201ENST00000302528 DKK1O94907 266 aa8.48□□□□□ -1.05
CLIP1-201ENST00000302528 C5orf64Q2M2E5 130 aa8.48□□□□□ -1.05
CLIP1-201ENST00000302528 C20orf204Q6ZNR8 217 aa8.48□□□□□ -1.05
CLIP1-201ENST00000302528 TMEM256Q8N2U0 113 aa8.48□□□□□ -1.05
CLIP1-201ENST00000302528 PRDM6Q9NQX0 595 aa8.48□□□□□ -1.05
CLIP1-201ENST00000302528 AKAP6Q13023 2319 aa8.48□□□□□ -1.05
CLIP1-201ENST00000302528 ARMS2P0C7Q2 107 aa8.48□□□□□ -1.05
CLIP1-201ENST00000302528 DAZ1Q9NQZ3 744 aaKnown RBP8.48□□□□□ -1.05
CLIP1-201ENST00000302528 RALGAPA2Q2PPJ7 1873 aa8.48□□□□□ -1.05
CLIP1-201ENST00000302528 EP300Q09472 2414 aaPredicted RBP8.48□□□□□ -1.05
CLIP1-201ENST00000302528 IFITM1P13164 125 aa8.48□□□□□ -1.05
CLIP1-201ENST00000302528 LYPD1Q8N2G4 141 aa8.48□□□□□ -1.05
CLIP1-201ENST00000302528 MRPL27Q9P0M9 148 aaKnown RBP8.48□□□□□ -1.05
CLIP1-201ENST00000302528 TINCRA0A1B0GVN0 87 aa8.47□□□□□ -1.05
CLIP1-201ENST00000302528 H0YIZ8 118 aa8.47□□□□□ -1.05
CLIP1-201ENST00000302528 OVOL3O00110 214 aa8.47□□□□□ -1.05
CLIP1-201ENST00000302528 LYZL4Q96KX0 146 aa8.47□□□□□ -1.05
CLIP1-201ENST00000302528 LCTP09848 1927 aa8.47□□□□□ -1.05
CLIP1-201ENST00000302528 A0A1W2PPI3 338 aa8.47□□□□□ -1.05
CLIP1-201ENST00000302528 GATA4P43694 442 aa8.47□□□□□ -1.05
CLIP1-201ENST00000302528 GAGE6Q13070 117 aa8.47□□□□□ -1.05
CLIP1-201ENST00000302528 STPG4Q8N801 248 aa8.47□□□□□ -1.05
CLIP1-201ENST00000302528 PLXNA1Q9UIW2 1896 aa8.47□□□□□ -1.05
CLIP1-201ENST00000302528 TMEM141Q96I45 108 aa8.47□□□□□ -1.05
CLIP1-201ENST00000302528 IGKV1-5P01602 117 aa8.47□□□□□ -1.05
CLIP1-201ENST00000302528 VWC2Q2TAL6 325 aa8.47□□□□□ -1.05
CLIP1-201ENST00000302528 PPDPFLQ8WWR9 84 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms