RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 PPIFP30405 207 aaKnown RBP11.38□□□□□ -0.59
SDC2-201ENST00000302190 CX3CL1P78423 397 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 TWIST1Q15672 202 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 SPACA3Q8IXA5 215 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.38□□□□□ -0.59
SDC2-201ENST00000302190 TMEM70Q9BUB7 260 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 GNB1LQ9BYB4 327 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 TMEM14BQ9NUH8 114 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 CRYBG3Q68DQ2 2970 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 F2RL2O00254 374 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 TYMSP04818 313 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 ZNF788Q6ZQV5 615 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 TRBV9A0A0B4J1U6 114 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 WT1-ASQ06250 92 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 RIGQ13278 110 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 PRR30Q53SZ7 412 aaPredicted RBP11.38□□□□□ -0.59
SDC2-201ENST00000302190 CACNG8Q8WXS5 425 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 NAA38Q9BRA0 125 aaKnown RBP11.38□□□□□ -0.59
SDC2-201ENST00000302190 SONP18583 2426 aaKnown RBP11.37□□□□□ -0.59
SDC2-201ENST00000302190 hDV102S1A0JD36 115 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 H0YJW9 148 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 FAM162BQ5T6X4 162 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 TNFRSF14Q92956 283 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 GRAMD2BQ96HH9 432 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 TMEM238LA0A1B0GVL6 79 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 A0A1W2PS18 150 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 IGLC2P0DOY2 106 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 IGLC3P0DOY3 106 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 CA7P43166 264 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 C1orf229Q6ZS94 237 aaPredicted RBP11.37□□□□□ -0.59
SDC2-201ENST00000302190 PPP1R27Q86WC6 154 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 C19orf24Q9BVV8 132 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 CLEC7AQ9BXN2 247 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 RPP21Q9H633 154 aaKnown RBP11.37□□□□□ -0.59
SDC2-201ENST00000302190 V9GYV3 84 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 MYO18BQ8IUG5 2567 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 IGKV1OR2-108A0A075B7D4 117 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.37□□□□□ -0.59
SDC2-201ENST00000302190 S100A4P26447 101 aaKnown RBP11.37□□□□□ -0.59
SDC2-201ENST00000302190 ADIPOQQ15848 244 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 RNASE6Q93091 150 aaKnown RBP11.37□□□□□ -0.59
SDC2-201ENST00000302190 CLUHP3Q96NS8 147 aa11.37□□□□□ -0.59
SDC2-201ENST00000302190 A0A1W2PPI3 338 aa11.36□□□□□ -0.59
SDC2-201ENST00000302190 APOHP02749 345 aaPredicted RBP11.36□□□□□ -0.59
SDC2-201ENST00000302190 TSPOP30536 169 aa11.36□□□□□ -0.59
SDC2-201ENST00000302190 SLC25A48Q6ZT89 311 aaKnown RBP11.36□□□□□ -0.59
SDC2-201ENST00000302190 USP9XQ93008 2570 aaPredicted RBP11.36□□□□□ -0.59
SDC2-201ENST00000302190 FLNCQ14315 2725 aa11.36□□□□□ -0.59
SDC2-201ENST00000302190 IGSF10Q6WRI0 2623 aa11.36□□□□□ -0.59
SDC2-201ENST00000302190 LGALS7P47929 136 aa11.36□□□□□ -0.59
SDC2-201ENST00000302190 AP5S1Q9NUS5 200 aa11.36□□□□□ -0.59
SDC2-201ENST00000302190 LSM4Q9Y4Z0 139 aaKnown RBP11.36□□□□□ -0.59
SDC2-201ENST00000302190 E7EUB6 86 aa11.36□□□□□ -0.59
SDC2-201ENST00000302190 CKS2P33552 79 aa11.36□□□□□ -0.59
SDC2-201ENST00000302190 RPL15P61313 204 aaKnown RBP11.36□□□□□ -0.59
SDC2-201ENST00000302190 C2orf83Q53S99 150 aa11.36□□□□□ -0.59
SDC2-201ENST00000302190 OR4A5Q8NH83 315 aa11.36□□□□□ -0.59
SDC2-201ENST00000302190 FAM57AQ8TBR7 257 aa11.36□□□□□ -0.59
SDC2-201ENST00000302190 FNDC4Q9H6D8 234 aaPredicted RBP11.36□□□□□ -0.59
SDC2-201ENST00000302190 DKK4Q9UBT3 224 aa11.36□□□□□ -0.59
SDC2-201ENST00000302190 C9JCJ5 164 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 TMEM136Q6ZRR5 245 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 TSKUQ8WUA8 353 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 KLK15Q9H2R5 256 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 A0A0G2JNJ9 132 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 TMEM189A5PLL7 270 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 TOMM40O96008 361 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 COMPP49747 757 aaPredicted RBP11.35□□□□□ -0.59
SDC2-201ENST00000302190 SLC25A34Q6PIV7 304 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 UBTD1Q9HAC8 227 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 Q9UFV3 132 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 FAM215AQ9Y5M1 114 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 DCHS2Q6V1P9 2916 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 NDUFS8O00217 210 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 KLRD1Q13241 179 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 AMMECR1LQ6DCA0 310 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 C22orf34Q6ZV56 151 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 CENPVQ7Z7K6 275 aaPredicted RBP11.35□□□□□ -0.59
SDC2-201ENST00000302190 DEFB104AQ8WTQ1 72 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 RAB1BQ9H0U4 201 aa11.35□□□□□ -0.59
SDC2-201ENST00000302190 TIMM23O14925 209 aa11.34□□□□□ -0.59
SDC2-201ENST00000302190 CEACAM3P40198 252 aa11.34□□□□□ -0.59
SDC2-201ENST00000302190 GAGE10A6NGK3 116 aa11.34□□□□□ -0.59
SDC2-201ENST00000302190 TMEM133Q9H2Q1 129 aa11.34□□□□□ -0.59
SDC2-201ENST00000302190 THYN1Q9P016 225 aa11.34□□□□□ -0.59
SDC2-201ENST00000302190 ZNF257Q9Y2Q1 563 aa11.34□□□□□ -0.59
SDC2-201ENST00000302190 GOSR1O95249 250 aa11.33□□□□□ -0.59
SDC2-201ENST00000302190 RPL24P83731 157 aaKnown RBP11.33□□□□□ -0.59
SDC2-201ENST00000302190 MBD3L4A6NDZ8 208 aaPredicted RBP11.33□□□□□ -0.6
SDC2-201ENST00000302190 MBD3L3A6NE82 208 aaPredicted RBP11.33□□□□□ -0.6
SDC2-201ENST00000302190 OR2T8A6NH00 312 aa11.33□□□□□ -0.6
SDC2-201ENST00000302190 MBD3L5A6NJ08 208 aaPredicted RBP11.33□□□□□ -0.6
SDC2-201ENST00000302190 FAM90A9PA6NNJ1 464 aa11.33□□□□□ -0.6
SDC2-201ENST00000302190 MBD3L2Q8NHZ7 208 aaPredicted RBP11.33□□□□□ -0.6
SDC2-201ENST00000302190 LINC00527Q9UJ94 153 aa11.33□□□□□ -0.6
SDC2-201ENST00000302190 HSPB8Q9UJY1 196 aa11.33□□□□□ -0.6
SDC2-201ENST00000302190 TMEM178BH3BS89 294 aa11.33□□□□□ -0.6
SDC2-201ENST00000302190 A0A1B0GUT8 65 aa11.32□□□□□ -0.6
SDC2-201ENST00000302190 GAGE12BA1L429 117 aa11.32□□□□□ -0.6
SDC2-201ENST00000302190 C18orf32Q8TCD1 76 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms