RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 NUTF2P61970 127 aaKnown RBP13.27□□□□□ -0.29
TMEM88-201ENST00000301599 AGRNO00468 2067 aa13.26□□□□□ -0.29
TMEM88-201ENST00000301599 MIFP14174 115 aa13.26□□□□□ -0.29
TMEM88-201ENST00000301599 C1orf194Q5T5A4 169 aa13.26□□□□□ -0.29
TMEM88-201ENST00000301599 Q8NAQ8 132 aa13.26□□□□□ -0.29
TMEM88-201ENST00000301599 STOML3Q8TAV4 291 aa13.26□□□□□ -0.29
TMEM88-201ENST00000301599 TRGV9Q99603 122 aa13.26□□□□□ -0.29
TMEM88-201ENST00000301599 MAGT1Q9H0U3 335 aa13.26□□□□□ -0.29
TMEM88-201ENST00000301599 ALMS1Q8TCU4 4167 aa13.25□□□□□ -0.29
TMEM88-201ENST00000301599 ZNF705EA8MWA4 302 aaPredicted RBP13.25□□□□□ -0.29
TMEM88-201ENST00000301599 KRBOX1C9JBD0 128 aa13.25□□□□□ -0.29
TMEM88-201ENST00000301599 WRBO00258 174 aa13.25□□□□□ -0.29
TMEM88-201ENST00000301599 CFDP00746 253 aaPredicted RBP13.25□□□□□ -0.29
TMEM88-201ENST00000301599 TPT1P13693 172 aaKnown RBP13.25□□□□□ -0.29
TMEM88-201ENST00000301599 ID1P41134 155 aa13.25□□□□□ -0.29
TMEM88-201ENST00000301599 LYZP61626 148 aa13.25□□□□□ -0.29
TMEM88-201ENST00000301599 GGNBP1Q5YKI7 109 aa13.25□□□□□ -0.29
TMEM88-201ENST00000301599 EIF4E3Q8N5X7 224 aaKnown RBP13.25□□□□□ -0.29
TMEM88-201ENST00000301599 CSNK1G2-AS1Q8NCQ2 148 aa13.25□□□□□ -0.29
TMEM88-201ENST00000301599 C1QTNF4Q9BXJ3 329 aa13.25□□□□□ -0.29
TMEM88-201ENST00000301599 HRH4Q9H3N8 390 aa13.25□□□□□ -0.29
TMEM88-201ENST00000301599 IGHV4-28A0A0C4DH34 117 aa13.24□□□□□ -0.29
TMEM88-201ENST00000301599 H3BMM0 161 aa13.24□□□□□ -0.29
TMEM88-201ENST00000301599 RBMY1A1P0DJD3 496 aaKnown RBP13.24□□□□□ -0.29
TMEM88-201ENST00000301599 RBMY1CP0DJD4 496 aa13.24□□□□□ -0.29
TMEM88-201ENST00000301599 NKX2-1P43699 371 aaPredicted RBP13.24□□□□□ -0.29
TMEM88-201ENST00000301599 RBMY1FQ15415 496 aaKnown RBP13.24□□□□□ -0.29
TMEM88-201ENST00000301599 THAP8Q8NA92 274 aa13.24□□□□□ -0.29
TMEM88-201ENST00000301599 C2CD4CQ8TF44 421 aa13.24□□□□□ -0.29
TMEM88-201ENST00000301599 AQP10Q96PS8 301 aa13.24□□□□□ -0.29
TMEM88-201ENST00000301599 CLEC5AQ9NY25 188 aa13.24□□□□□ -0.29
TMEM88-201ENST00000301599 MBD2Q9UBB5 411 aa13.24□□□□□ -0.29
TMEM88-201ENST00000301599 EPPK1P58107 5090 aaKnown RBP13.24□□□□□ -0.29
TMEM88-201ENST00000301599 RNF222A6NCQ9 220 aa13.23□□□□□ -0.29
TMEM88-201ENST00000301599 CCSO14618 274 aa13.23□□□□□ -0.29
TMEM88-201ENST00000301599 M6PRP20645 277 aa13.23□□□□□ -0.29
TMEM88-201ENST00000301599 TCTAP57738 103 aa13.23□□□□□ -0.29
TMEM88-201ENST00000301599 LGALS9CQ6DKI2 356 aa13.23□□□□□ -0.29
TMEM88-201ENST00000301599 ZNF471Q9BX82 626 aaPredicted RBP13.23□□□□□ -0.29
TMEM88-201ENST00000301599 X6R8D5 127 aa13.23□□□□□ -0.29
TMEM88-201ENST00000301599 IGKV1OR2-108A0A075B7D4 117 aa13.22□□□□□ -0.29
TMEM88-201ENST00000301599 C11orf94C9JXX5 98 aa13.22□□□□□ -0.29
TMEM88-201ENST00000301599 NMBP08949 121 aa13.22□□□□□ -0.29
TMEM88-201ENST00000301599 ID3Q02535 119 aa13.22□□□□□ -0.29
TMEM88-201ENST00000301599 LRRC37A5PQ49AS3 106 aa13.22□□□□□ -0.29
TMEM88-201ENST00000301599 SPANXN5Q5MJ07 72 aa13.22□□□□□ -0.29
TMEM88-201ENST00000301599 OR8I2Q8N0Y5 310 aa13.22□□□□□ -0.29
TMEM88-201ENST00000301599 LINC00052Q96N35 136 aa13.22□□□□□ -0.29
TMEM88-201ENST00000301599 STRAPQ9Y3F4 350 aaKnown RBP13.22□□□□□ -0.29
TMEM88-201ENST00000301599 HLA-DRB4P13762 266 aa13.21□□□□□ -0.29
TMEM88-201ENST00000301599 ALKAL2Q6UX46 152 aa13.21□□□□□ -0.29
TMEM88-201ENST00000301599 XCL2Q9UBD3 114 aa13.21□□□□□ -0.29
TMEM88-201ENST00000301599 HLA-DRB4X5D2U9 266 aa13.21□□□□□ -0.29
TMEM88-201ENST00000301599 PRSS46E5RG02 174 aa13.2□□□□□ -0.3
TMEM88-201ENST00000301599 TEX46H3BTG2 121 aa13.2□□□□□ -0.3
TMEM88-201ENST00000301599 ADAP1O75689 374 aa13.2□□□□□ -0.3
TMEM88-201ENST00000301599 HLA-DMBP28068 263 aa13.2□□□□□ -0.3
TMEM88-201ENST00000301599 S100A7P31151 101 aa13.2□□□□□ -0.3
TMEM88-201ENST00000301599 PSMB3P49720 205 aa13.2□□□□□ -0.3
TMEM88-201ENST00000301599 IAH1Q2TAA2 248 aaPredicted RBP13.2□□□□□ -0.3
TMEM88-201ENST00000301599 TOR2AQ5JU69 321 aa13.2□□□□□ -0.3
TMEM88-201ENST00000301599 UQCC3Q6UW78 93 aa13.2□□□□□ -0.3
TMEM88-201ENST00000301599 BAP18Q8IXM2 172 aa13.2□□□□□ -0.3
TMEM88-201ENST00000301599 BPIFCQ8NFQ6 507 aa13.2□□□□□ -0.3
TMEM88-201ENST00000301599 SLC45A2Q9UMX9 530 aa13.2□□□□□ -0.3
TMEM88-201ENST00000301599 BIRC6Q9NR09 4857 aa13.19□□□□□ -0.3
TMEM88-201ENST00000301599 ELOA3CA0A087WX78 387 aaPredicted RBP13.19□□□□□ -0.3
TMEM88-201ENST00000301599 IL15RAQ13261 267 aa13.19□□□□□ -0.3
TMEM88-201ENST00000301599 SAMD13Q5VXD3 122 aa13.19□□□□□ -0.3
TMEM88-201ENST00000301599 SPATA31B1PQ5VZV4 182 aa13.19□□□□□ -0.3
TMEM88-201ENST00000301599 FOXI2Q6ZQN5 318 aa13.19□□□□□ -0.3
TMEM88-201ENST00000301599 RNF141Q8WVD5 230 aa13.19□□□□□ -0.3
TMEM88-201ENST00000301599 SAV1Q9H4B6 383 aaPredicted RBP13.19□□□□□ -0.3
TMEM88-201ENST00000301599 IGLL5B9A064 214 aa13.18□□□□□ -0.3
TMEM88-201ENST00000301599 E5RGE8 158 aa13.18□□□□□ -0.3
TMEM88-201ENST00000301599 ISLRO14498 428 aa13.18□□□□□ -0.3
TMEM88-201ENST00000301599 GALR1P47211 349 aa13.18□□□□□ -0.3
TMEM88-201ENST00000301599 POLR2GP62487 172 aaKnown RBP eCLIP13.18□□□□□ -0.3
TMEM88-201ENST00000301599 AKR1C1Q04828 323 aa13.18□□□□□ -0.3
TMEM88-201ENST00000301599 CLUHP3Q96NS8 147 aa13.18□□□□□ -0.3
TMEM88-201ENST00000301599 RNF126Q9BV68 326 aa13.18□□□□□ -0.3
TMEM88-201ENST00000301599 PSENENQ9NZ42 101 aa13.18□□□□□ -0.3
TMEM88-201ENST00000301599 TRAV10A0A0B4J240 114 aa13.17□□□□□ -0.3
TMEM88-201ENST00000301599 RAB19A4D1S5 217 aa13.17□□□□□ -0.3
TMEM88-201ENST00000301599 ZNF98A6NK75 572 aa13.17□□□□□ -0.3
TMEM88-201ENST00000301599 H3BP45 60 aa13.17□□□□□ -0.3
TMEM88-201ENST00000301599 SOCS3O14543 225 aa13.17□□□□□ -0.3
TMEM88-201ENST00000301599 IGKV3-20P01619 116 aa13.17□□□□□ -0.3
TMEM88-201ENST00000301599 ORM2P19652 201 aa13.17□□□□□ -0.3
TMEM88-201ENST00000301599 PVALBP20472 110 aaPredicted RBP13.17□□□□□ -0.3
TMEM88-201ENST00000301599 MEOX2P50222 304 aa13.17□□□□□ -0.3
TMEM88-201ENST00000301599 GDF5OSQ5U4N7 250 aa13.17□□□□□ -0.3
TMEM88-201ENST00000301599 TMEM144Q7Z5S9 345 aa13.17□□□□□ -0.3
TMEM88-201ENST00000301599 OR4D5Q8NGN0 318 aa13.17□□□□□ -0.3
TMEM88-201ENST00000301599 SAT2Q96F10 170 aaPredicted RBP13.17□□□□□ -0.3
TMEM88-201ENST00000301599 SMIM8Q96KF7 97 aa13.17□□□□□ -0.3
TMEM88-201ENST00000301599 GSKIPQ9P0R6 139 aa13.17□□□□□ -0.3
TMEM88-201ENST00000301599 K7EPK0 472 aa13.16□□□□□ -0.3
TMEM88-201ENST00000301599 DEDDO75618 318 aa13.16□□□□□ -0.3
TMEM88-201ENST00000301599 GATA2P23769 480 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms