RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 GPR179Q6PRD1 2367 aa11.61□□□□□ -0.55
CDT1-201ENST00000301019 PRB3Q04118 309 aaPredicted RBP11.6□□□□□ -0.55
CDT1-201ENST00000301019 HCP5Q6MZN7 132 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 DEFB104AQ8WTQ1 72 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 LINC00470Q9BZP3 86 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 EPDR1Q9UM22 224 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 BOKQ9UMX3 212 aaPredicted RBP11.6□□□□□ -0.55
CDT1-201ENST00000301019 TNRC6BQ9UPQ9 1833 aaKnown RBP11.6□□□□□ -0.55
CDT1-201ENST00000301019 C15orf61A6NNL5 157 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 H3BVH4 76 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 GAGE13Q4V321 117 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 LINC00596Q86U02 117 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 OR1L4Q8NGR5 311 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 CHAC1Q9BUX1 264 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 LOC107984156A0A0G2JMH3 177 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 SRRM4A7MD48 611 aaKnown RBP11.6□□□□□ -0.55
CDT1-201ENST00000301019 DUX4L9Q6RFH8 374 aaPredicted RBP11.6□□□□□ -0.55
CDT1-201ENST00000301019 PATE2Q6UY27 113 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 ARL17AQ8IVW1 177 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 GPR82Q96P67 336 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 ANAPC13Q9BS18 74 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 CHRNA10Q9GZZ6 450 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 TMEM160Q9NX00 188 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 SLC25A10Q9UBX3 287 aaPredicted RBP11.6□□□□□ -0.55
CDT1-201ENST00000301019 PSG8Q9UQ74 426 aa11.6□□□□□ -0.55
CDT1-201ENST00000301019 PCNX1Q96RV3 2341 aa11.59□□□□□ -0.55
CDT1-201ENST00000301019 AKAP6Q13023 2319 aa11.59□□□□□ -0.55
CDT1-201ENST00000301019 CCL4P13236 92 aa11.59□□□□□ -0.55
CDT1-201ENST00000301019 RNF138Q8WVD3 245 aa11.59□□□□□ -0.55
CDT1-201ENST00000301019 A0A096LNJ9 63 aa11.59□□□□□ -0.55
CDT1-201ENST00000301019 DKK1O94907 266 aa11.59□□□□□ -0.55
CDT1-201ENST00000301019 TNFRSF1AP19438 455 aa11.59□□□□□ -0.55
CDT1-201ENST00000301019 CCL7P80098 99 aa11.59□□□□□ -0.55
CDT1-201ENST00000301019 EVI2AP22794 236 aa11.58□□□□□ -0.56
CDT1-201ENST00000301019 XGP55808 180 aa11.58□□□□□ -0.56
CDT1-201ENST00000301019 SIGLEC8Q9NYZ4 499 aa11.58□□□□□ -0.56
CDT1-201ENST00000301019 SAA2P0DJI9 122 aaPredicted RBP11.58□□□□□ -0.56
CDT1-201ENST00000301019 LY6G6EA0A0G2JKS1 128 aa11.58□□□□□ -0.56
CDT1-201ENST00000301019 A0A1W2PQM1 296 aa11.58□□□□□ -0.56
CDT1-201ENST00000301019 TCRBV4S1A1TA0A5B7 111 aa11.58□□□□□ -0.56
CDT1-201ENST00000301019 ZNF146Q15072 292 aa11.58□□□□□ -0.56
CDT1-201ENST00000301019 FAM162BQ5T6X4 162 aa11.58□□□□□ -0.56
CDT1-201ENST00000301019 C1orf122Q6ZSJ8 110 aa11.58□□□□□ -0.56
CDT1-201ENST00000301019 C8orf86Q6ZUL3 223 aa11.58□□□□□ -0.56
CDT1-201ENST00000301019 PKIBQ9C010 78 aa11.58□□□□□ -0.56
CDT1-201ENST00000301019 U3KQA8 63 aa11.58□□□□□ -0.56
CDT1-201ENST00000301019 PRSS29PA6NIE9 313 aa11.57□□□□□ -0.56
CDT1-201ENST00000301019 GAS8-AS1O95177 125 aa11.57□□□□□ -0.56
CDT1-201ENST00000301019 FHL3Q13643 280 aa11.57□□□□□ -0.56
CDT1-201ENST00000301019 TBC1D28Q2M2D7 210 aa11.57□□□□□ -0.56
CDT1-201ENST00000301019 MRPL16Q9NX20 251 aaKnown RBP11.57□□□□□ -0.56
CDT1-201ENST00000301019 TMPRSS3P57727 454 aa11.57□□□□□ -0.56
CDT1-201ENST00000301019 ERVK11-1P61568 191 aa11.57□□□□□ -0.56
CDT1-201ENST00000301019 RASL11AQ6T310 242 aa11.57□□□□□ -0.56
CDT1-201ENST00000301019 CD177Q8N6Q3 437 aa11.57□□□□□ -0.56
CDT1-201ENST00000301019 IFI27L1Q96BM0 104 aa11.57□□□□□ -0.56
CDT1-201ENST00000301019 KIR2DL4Q99706 377 aa11.57□□□□□ -0.56
CDT1-201ENST00000301019 FXYD5Q96DB9 178 aa11.56□□□□□ -0.56
CDT1-201ENST00000301019 HIST1H4GQ99525 98 aa11.56□□□□□ -0.56
CDT1-201ENST00000301019 IGLL5B9A064 214 aa11.56□□□□□ -0.56
CDT1-201ENST00000301019 TIMM8AO60220 97 aaPredicted RBP11.56□□□□□ -0.56
CDT1-201ENST00000301019 ABHD17BQ5VST6 288 aa11.56□□□□□ -0.56
CDT1-201ENST00000301019 ATP5L2Q7Z4Y8 100 aa11.56□□□□□ -0.56
CDT1-201ENST00000301019 CUBNO60494 3623 aa11.55□□□□□ -0.56
CDT1-201ENST00000301019 IGLV3-12A0A075B6K2 115 aa11.55□□□□□ -0.56
CDT1-201ENST00000301019 A0A1B0GUT8 65 aa11.55□□□□□ -0.56
CDT1-201ENST00000301019 ZNF766Q5HY98 468 aa11.55□□□□□ -0.56
CDT1-201ENST00000301019 ARRDC1-AS1Q9H2J1 176 aa11.55□□□□□ -0.56
CDT1-201ENST00000301019 PTPRBP23467 1997 aa11.55□□□□□ -0.56
CDT1-201ENST00000301019 TRBV25-1A0A075B6N4 114 aa11.55□□□□□ -0.56
CDT1-201ENST00000301019 IGHV1-45A0A0A0MS14 117 aa11.55□□□□□ -0.56
CDT1-201ENST00000301019 ZC2HC1BQ5TFG8 222 aa11.55□□□□□ -0.56
CDT1-201ENST00000301019 FAM231DQ6ZW35 169 aa11.55□□□□□ -0.56
CDT1-201ENST00000301019 OR4X2Q8NGF9 303 aa11.55□□□□□ -0.56
CDT1-201ENST00000301019 PRELID3AQ96N28 172 aa11.55□□□□□ -0.56
CDT1-201ENST00000301019 COL25A1Q9BXS0 654 aaPredicted RBP11.55□□□□□ -0.56
CDT1-201ENST00000301019 IFI27L2Q9H2X8 130 aa11.55□□□□□ -0.56
CDT1-201ENST00000301019 C7orf69Q9H7B7 122 aa11.55□□□□□ -0.56
CDT1-201ENST00000301019 SCGB1A1P11684 91 aa11.54□□□□□ -0.56
CDT1-201ENST00000301019 COX6A1P12074 109 aa11.54□□□□□ -0.56
CDT1-201ENST00000301019 PSMB2P49721 201 aa11.54□□□□□ -0.56
CDT1-201ENST00000301019 FOXI2Q6ZQN5 318 aa11.54□□□□□ -0.56
CDT1-201ENST00000301019 C17orf77Q96MU5 243 aa11.54□□□□□ -0.56
CDT1-201ENST00000301019 NDFIP1Q9BT67 221 aa11.54□□□□□ -0.56
CDT1-201ENST00000301019 SPTBN2O15020 2390 aa11.54□□□□□ -0.56
CDT1-201ENST00000301019 OR9G4Q8NGQ1 327 aa11.54□□□□□ -0.56
CDT1-201ENST00000301019 Q9H3A6 140 aa11.54□□□□□ -0.56
CDT1-201ENST00000301019 RPUSD1Q9UJJ7 312 aaKnown RBP11.54□□□□□ -0.56
CDT1-201ENST00000301019 S4R3C0 116 aa11.54□□□□□ -0.56
CDT1-201ENST00000301019 IGHV3-72A0A0B4J1Y9 119 aa11.54□□□□□ -0.56
CDT1-201ENST00000301019 NFE4Q86UQ8 179 aa11.54□□□□□ -0.56
CDT1-201ENST00000301019 FOXC2Q99958 501 aa11.54□□□□□ -0.56
CDT1-201ENST00000301019 SPATA25Q9BR10 227 aa11.54□□□□□ -0.56
CDT1-201ENST00000301019 KLK15Q9H2R5 256 aa11.54□□□□□ -0.56
CDT1-201ENST00000301019 IGHV5-10-1A0A0J9YXX1 117 aa11.53□□□□□ -0.56
CDT1-201ENST00000301019 GATA1P15976 413 aaPredicted RBP11.53□□□□□ -0.56
CDT1-201ENST00000301019 PRDX2P32119 198 aa11.53□□□□□ -0.56
CDT1-201ENST00000301019 SPRNQ5BIV9 151 aa11.53□□□□□ -0.56
CDT1-201ENST00000301019 MAPKAPK5-AS1Q8N8E1 139 aa11.53□□□□□ -0.56
CDT1-201ENST00000301019 CYSLTR1Q9Y271 337 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms