RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 S100PP25815 95 aa13.71□□□□□ -0.22
CCDC78-201ENST00000293889 ADMP35318 185 aa13.71□□□□□ -0.22
CCDC78-201ENST00000293889 ZNF90Q03938 601 aa13.71□□□□□ -0.22
CCDC78-201ENST00000293889 TRGV9Q99603 122 aa13.71□□□□□ -0.22
CCDC78-201ENST00000293889 NPCDR1Q9BY65 106 aa13.71□□□□□ -0.22
CCDC78-201ENST00000293889 TSSC4Q9Y5U2 329 aaPredicted RBP13.71□□□□□ -0.22
CCDC78-201ENST00000293889 TRAV30A0A087WSZ9 112 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 HIST1H2BKO60814 126 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 MPDU1O75352 247 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 HIST1H2BJP06899 126 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 HIST1H2BOP23527 126 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 HIST1H2BBP33778 126 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 PSMB3P49720 205 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 ELLP55199 621 aaPredicted RBP13.7□□□□□ -0.22
CCDC78-201ENST00000293889 HIST1H2BDP58876 126 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 HIST1H2BCP62807 126 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 HIST2H2BEQ16778 126 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.7□□□□□ -0.22
CCDC78-201ENST00000293889 C3orf56Q8N813 242 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 OR10G9Q8NGN4 311 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 OR10G7Q8NGN6 311 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 HIST1H2BHQ93079 126 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 HIST1H2BNQ99877 126 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 HIST1H2BMQ99879 126 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 GSN-AS1Q9NRJ2 163 aa13.7□□□□□ -0.22
CCDC78-201ENST00000293889 PEF1Q9UBV8 284 aaKnown RBP13.7□□□□□ -0.22
CCDC78-201ENST00000293889 A0A1W2PRX2 142 aa13.69□□□□□ -0.22
CCDC78-201ENST00000293889 ARL3P36405 182 aa13.69□□□□□ -0.22
CCDC78-201ENST00000293889 RAB31Q13636 194 aa13.69□□□□□ -0.22
CCDC78-201ENST00000293889 TMEM241Q24JQ0 296 aa13.69□□□□□ -0.22
CCDC78-201ENST00000293889 KLHL30-AS1Q8NEE0 82 aa13.69□□□□□ -0.22
CCDC78-201ENST00000293889 C4orf3Q8WVX3 66 aa13.69□□□□□ -0.22
CCDC78-201ENST00000293889 ZNF747Q9BV97 191 aa13.69□□□□□ -0.22
CCDC78-201ENST00000293889 GGTLC1Q9BX51 225 aa13.69□□□□□ -0.22
CCDC78-201ENST00000293889 IFITM10A6NMD0 228 aa13.68□□□□□ -0.22
CCDC78-201ENST00000293889 BMPR1BO00238 502 aa13.68□□□□□ -0.22
CCDC78-201ENST00000293889 FABP1P07148 127 aa13.68□□□□□ -0.22
CCDC78-201ENST00000293889 PFN1P07737 140 aaKnown RBP13.68□□□□□ -0.22
CCDC78-201ENST00000293889 FAM209BQ5JX69 171 aa13.68□□□□□ -0.22
CCDC78-201ENST00000293889 FFAR4Q5NUL3 377 aa13.68□□□□□ -0.22
CCDC78-201ENST00000293889 NIT2Q9NQR4 276 aa13.68□□□□□ -0.22
CCDC78-201ENST00000293889 SLC45A2Q9UMX9 530 aa13.68□□□□□ -0.22
CCDC78-201ENST00000293889 ANK2Q01484 3957 aa13.68□□□□□ -0.22
CCDC78-201ENST00000293889 GATA2P23769 480 aaPredicted RBP13.68□□□□□ -0.22
CCDC78-201ENST00000293889 ACOT6Q3I5F7 207 aaPredicted RBP13.68□□□□□ -0.22
CCDC78-201ENST00000293889 ZNF709Q8N972 641 aa13.68□□□□□ -0.22
CCDC78-201ENST00000293889 ZNF414Q96IQ9 312 aa13.68□□□□□ -0.22
CCDC78-201ENST00000293889 IGHV3-35A0A0C4DH35 117 aa13.67□□□□□ -0.22
CCDC78-201ENST00000293889 ADARB2-AS1A8MUL3 147 aa13.67□□□□□ -0.22
CCDC78-201ENST00000293889 SCGB2A1O75556 95 aa13.67□□□□□ -0.22
CCDC78-201ENST00000293889 RD3LP0DJH9 198 aa13.67□□□□□ -0.22
CCDC78-201ENST00000293889 YPEL3P61236 119 aaPredicted RBP13.67□□□□□ -0.22
CCDC78-201ENST00000293889 DEFB136Q30KP8 78 aa13.67□□□□□ -0.22
CCDC78-201ENST00000293889 MIC13Q5XKP0 118 aa13.67□□□□□ -0.22
CCDC78-201ENST00000293889 RAB24Q969Q5 203 aa13.67□□□□□ -0.22
CCDC78-201ENST00000293889 SMIM7Q9BQ49 75 aa13.67□□□□□ -0.22
CCDC78-201ENST00000293889 SRD5A3Q9H8P0 318 aa13.67□□□□□ -0.22
CCDC78-201ENST00000293889 IGHV4OR15-8A0A075B7B6 117 aa13.66□□□□□ -0.22
CCDC78-201ENST00000293889 A0A087WW49 117 aa13.66□□□□□ -0.22
CCDC78-201ENST00000293889 TOMM40O96008 361 aa13.66□□□□□ -0.22
CCDC78-201ENST00000293889 TRGC2P03986 189 aa13.66□□□□□ -0.22
CCDC78-201ENST00000293889 LINC00869P0C866 280 aa13.66□□□□□ -0.22
CCDC78-201ENST00000293889 PSG1P11464 419 aa13.66□□□□□ -0.22
CCDC78-201ENST00000293889 RPL29P47914 159 aaKnown RBP13.66□□□□□ -0.22
CCDC78-201ENST00000293889 NDUFA6P56556 154 aa13.66□□□□□ -0.22
CCDC78-201ENST00000293889 RPL23P62829 140 aaKnown RBP13.66□□□□□ -0.22
CCDC78-201ENST00000293889 C8orf86Q6ZUL3 223 aa13.66□□□□□ -0.22
CCDC78-201ENST00000293889 ANAPC16Q96DE5 110 aa13.66□□□□□ -0.22
CCDC78-201ENST00000293889 CITED1Q99966 193 aa13.66□□□□□ -0.22
CCDC78-201ENST00000293889 TXNDC17Q9BRA2 123 aa13.66□□□□□ -0.22
CCDC78-201ENST00000293889 URGCP-MRPS24S4R325 110 aa13.66□□□□□ -0.22
CCDC78-201ENST00000293889 GGCTO75223 188 aaKnown RBP13.65□□□□□ -0.22
CCDC78-201ENST00000293889 YIF1AO95070 293 aa13.65□□□□□ -0.22
CCDC78-201ENST00000293889 SELENOTP62341 195 aa13.65□□□□□ -0.22
CCDC78-201ENST00000293889 HIST3H2BBQ8N257 126 aa13.65□□□□□ -0.22
CCDC78-201ENST00000293889 STPG3Q8N7X2 389 aa13.65□□□□□ -0.22
CCDC78-201ENST00000293889 SLC25A22Q9H936 323 aa13.65□□□□□ -0.22
CCDC78-201ENST00000293889 PXMP4Q9Y6I8 212 aa13.65□□□□□ -0.22
CCDC78-201ENST00000293889 DNHD1Q96M86 4753 aa13.65□□□□□ -0.22
CCDC78-201ENST00000293889 TRGC1P0CF51 173 aa13.64□□□□□ -0.23
CCDC78-201ENST00000293889 PRR20EP86478 221 aa13.64□□□□□ -0.23
CCDC78-201ENST00000293889 PRR20CP86479 221 aa13.64□□□□□ -0.23
CCDC78-201ENST00000293889 PRR20DP86480 221 aa13.64□□□□□ -0.23
CCDC78-201ENST00000293889 PRR20BP86481 221 aa13.64□□□□□ -0.23
CCDC78-201ENST00000293889 PRR20AP86496 221 aa13.64□□□□□ -0.23
CCDC78-201ENST00000293889 NSUN5P1Q3KNT7 163 aa13.64□□□□□ -0.23
CCDC78-201ENST00000293889 ZNF600Q6ZNG1 722 aa13.64□□□□□ -0.23
CCDC78-201ENST00000293889 NDUFA11Q86Y39 141 aa13.64□□□□□ -0.23
CCDC78-201ENST00000293889 OR1N2Q8NGR9 330 aa13.64□□□□□ -0.23
CCDC78-201ENST00000293889 FRZBQ92765 325 aa13.64□□□□□ -0.23
CCDC78-201ENST00000293889 DUX3Q96PT4 197 aa13.64□□□□□ -0.23
CCDC78-201ENST00000293889 PARLQ9H300 379 aa13.64□□□□□ -0.23
CCDC78-201ENST00000293889 CDC34P49427 236 aaPredicted RBP13.64□□□□□ -0.23
CCDC78-201ENST00000293889 RELQ04864 619 aaPredicted RBP13.64□□□□□ -0.23
CCDC78-201ENST00000293889 OR11H1Q8NG94 326 aa13.64□□□□□ -0.23
CCDC78-201ENST00000293889 RAX2Q96IS3 184 aa13.64□□□□□ -0.23
CCDC78-201ENST00000293889 S100A2P29034 98 aa13.63□□□□□ -0.23
CCDC78-201ENST00000293889 COA6Q5JTJ3 125 aaKnown RBP13.63□□□□□ -0.23
CCDC78-201ENST00000293889 SHISA2Q6UWI4 295 aa13.63□□□□□ -0.23
CCDC78-201ENST00000293889 OR51G1Q8NGK1 321 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms