RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 RNF182Q8N6D2 247 aa9.72□□□□□ -0.85
SYNGAP1-201ENST00000293748 CHTOPQ9Y3Y2 248 aaKnown RBP9.72□□□□□ -0.85
SYNGAP1-201ENST00000293748 CFAP54Q96N23 3096 aa9.71□□□□□ -0.85
SYNGAP1-201ENST00000293748 IGKV3OR2-268A0A0C4DH90 116 aa9.71□□□□□ -0.85
SYNGAP1-201ENST00000293748 RBMY1BA6NDE4 496 aaKnown RBP9.71□□□□□ -0.85
SYNGAP1-201ENST00000293748 RBMY1EA6NEQ0 496 aaKnown RBP9.71□□□□□ -0.85
SYNGAP1-201ENST00000293748 IGKV3-20P01619 116 aa9.71□□□□□ -0.85
SYNGAP1-201ENST00000293748 RBMY1DP0C7P1 496 aaKnown RBP9.71□□□□□ -0.85
SYNGAP1-201ENST00000293748 RBMY1A1P0DJD3 496 aaKnown RBP9.71□□□□□ -0.85
SYNGAP1-201ENST00000293748 RBMY1CP0DJD4 496 aa9.71□□□□□ -0.85
SYNGAP1-201ENST00000293748 CKS1BP61024 79 aa9.71□□□□□ -0.85
SYNGAP1-201ENST00000293748 ZNF474Q6S9Z5 364 aaPredicted RBP9.71□□□□□ -0.85
SYNGAP1-201ENST00000293748 BCL6BQ8N143 479 aaPredicted RBP9.71□□□□□ -0.85
SYNGAP1-201ENST00000293748 S4R3C0 116 aa9.71□□□□□ -0.85
SYNGAP1-201ENST00000293748 TRAV8-4A0A0B4J246 113 aa9.71□□□□□ -0.86
SYNGAP1-201ENST00000293748 CD5LO43866 347 aa9.71□□□□□ -0.86
SYNGAP1-201ENST00000293748 IGHV1-2P23083 117 aa9.71□□□□□ -0.86
SYNGAP1-201ENST00000293748 FAM90A2PQ658T7 463 aa9.71□□□□□ -0.86
SYNGAP1-201ENST00000293748 FAM71F2Q6NXP2 309 aa9.71□□□□□ -0.86
SYNGAP1-201ENST00000293748 SEM1Q6ZVN7 128 aa9.71□□□□□ -0.86
SYNGAP1-201ENST00000293748 C8orf46Q8TAG6 207 aa9.71□□□□□ -0.86
SYNGAP1-201ENST00000293748 JMJD8Q96S16 334 aa9.71□□□□□ -0.86
SYNGAP1-201ENST00000293748 CRIM1Q9NZV1 1036 aa9.71□□□□□ -0.86
SYNGAP1-201ENST00000293748 ZNF462Q96JM2 2506 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 TRAV21A0A0B4J279 112 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 NBR2O15453 112 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 IGKV1-5P01602 117 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 ZFAND6Q6FIF0 208 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 KIR3DL3Q8N743 410 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 PLAURQ03405 335 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 TPTE2P1Q5T6R2 138 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 IGHV3-23P01764 117 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 LCN12Q6JVE5 192 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 ERG28Q9UKR5 140 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 VPS13AQ96RL7 3174 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 IGHV3-66A0A0C4DH42 116 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 C17orf100A8MU93 164 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 GUSBP1Q15486 140 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 LY6EQ16553 131 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 MST1LQ2TV78 715 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 PIMREGQ9BSJ6 248 aa9.7□□□□□ -0.86
SYNGAP1-201ENST00000293748 WNK2Q9Y3S1 2297 aa9.69□□□□□ -0.86
SYNGAP1-201ENST00000293748 SYS1-DBNDD2H3BUS1 97 aa9.69□□□□□ -0.86
SYNGAP1-201ENST00000293748 C20orf204Q6ZNR8 217 aa9.69□□□□□ -0.86
SYNGAP1-201ENST00000293748 INTS1Q8N201 2190 aaKnown RBP9.69□□□□□ -0.86
SYNGAP1-201ENST00000293748 TRBV6-6A0A0A6YYG2 114 aa9.69□□□□□ -0.86
SYNGAP1-201ENST00000293748 EREGO14944 169 aa9.69□□□□□ -0.86
SYNGAP1-201ENST00000293748 QRFPP83859 136 aa9.69□□□□□ -0.86
SYNGAP1-201ENST00000293748 HGFACQ04756 655 aa9.69□□□□□ -0.86
SYNGAP1-201ENST00000293748 ESDP10768 282 aa9.69□□□□□ -0.86
SYNGAP1-201ENST00000293748 CCL3L1P16619 93 aa9.69□□□□□ -0.86
SYNGAP1-201ENST00000293748 AKAP13Q12802 2813 aa9.69□□□□□ -0.86
SYNGAP1-201ENST00000293748 IGHV4-39P01824 125 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 CELA3BP08861 270 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 ATXN8Q156A1 80 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 Q6ZS49 121 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 COX11Q9Y6N1 276 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 GAGE12BA1L429 117 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 Q0VG73 95 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 TMEM133Q9H2Q1 129 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 TRAV2A0A0B4J234 112 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 CFPP27918 469 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 DAZAP2Q15038 168 aaPredicted RBP9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 CLEC19AQ6UXS0 136 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 RNASE4P34096 147 aaKnown RBP9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 PDLIM4P50479 330 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 SPSB3Q6PJ21 355 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 ZIC4Q8N9L1 334 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 TNFRSF14Q92956 283 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 NABP1Q96AH0 204 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 MGST2Q99735 147 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 SEPSECSQ9HD40 501 aaKnown RBP9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 TOMM7Q9P0U1 55 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 RPUSD1Q9UJJ7 312 aaKnown RBP9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 SLC25A15Q9Y619 301 aa9.68□□□□□ -0.86
SYNGAP1-201ENST00000293748 hDV102S1A0JD36 115 aa9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 WIPF3A6NGB9 483 aa9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 TMEM238C9JI98 176 aa9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 KLF17Q5JT82 389 aaPredicted RBP9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 SPATA31B1PQ5VZV4 182 aa9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 NEU4Q8WWR8 484 aaPredicted RBP9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 A0A087X0K7 114 aa9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 TRAV5A0A0B4J249 113 aa9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 TCRAP04437 139 aa9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 LAGE3Q14657 143 aa9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 DLX4Q92988 240 aaPredicted RBP9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 CCL19Q99731 98 aa9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 MPDZO75970 2070 aa9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 IGHV3OR16-8A0A075B7F1 116 aa9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 DUX3Q96PT4 197 aa9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 NAA38Q9BRA0 125 aaKnown RBP9.67□□□□□ -0.86
SYNGAP1-201ENST00000293748 IGKV1-27A0A075B6S5 117 aa9.66□□□□□ -0.86
SYNGAP1-201ENST00000293748 D6R8Y8 96 aa9.66□□□□□ -0.86
SYNGAP1-201ENST00000293748 IGHV2-70P01814 119 aa9.66□□□□□ -0.86
SYNGAP1-201ENST00000293748 NUP35Q8NFH5 326 aa9.66□□□□□ -0.86
SYNGAP1-201ENST00000293748 C9JQL5 133 aa9.66□□□□□ -0.86
SYNGAP1-201ENST00000293748 PFN1P07737 140 aaKnown RBP9.66□□□□□ -0.86
SYNGAP1-201ENST00000293748 KIR3DS1Q14943 382 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms