RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 MYOZ3Q8TDC0 251 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 RNF125Q96EQ8 232 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 NUDT11Q96G61 164 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 MRPL32Q9BYC8 188 aaKnown RBP3.88□□□□□ -1.79
UBR1-201ENST00000290650 EPDR1Q9UM22 224 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 TRBV20OR9-2A0A075B6H5 130 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 DLX6P56179 175 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 FAM162BQ5T6X4 162 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 RNF182Q8N6D2 247 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 PRSS33Q8NF86 280 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 DMDP11532 3685 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 MEF2CQ06413 473 aaPredicted RBP3.88□□□□□ -1.79
UBR1-201ENST00000290650 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.88□□□□□ -1.79
UBR1-201ENST00000290650 NAA38Q9BRA0 125 aaKnown RBP3.88□□□□□ -1.79
UBR1-201ENST00000290650 RPP21Q9H633 154 aaKnown RBP3.88□□□□□ -1.79
UBR1-201ENST00000290650 NRN1Q9NPD7 142 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 CDC42EP3Q9UKI2 254 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 IGKV3D-20A0A0C4DH25 116 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 BUB1B-PAK6H3BSN5 160 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 ERCC8Q13216 396 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 C15orf32Q32M92 178 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 VKORC1Q9BQB6 163 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 VENTXO95231 258 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 GCSHP23434 173 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 NDUFAF3Q9BU61 184 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 SPRY2O43597 315 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 MSMPQ1L6U9 139 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 TMEM136Q6ZRR5 245 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 EEF1AKMT3Q96AZ1 226 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 SLC25A39Q9BZJ4 359 aaPredicted RBP3.87□□□□□ -1.79
UBR1-201ENST00000290650 PRDM13Q9H4Q3 707 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 TRAV8-6A0A0B4J262 113 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 C15orf65H3BRN8 121 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 RNASE2P10153 161 aaKnown RBP3.87□□□□□ -1.79
UBR1-201ENST00000290650 EMP1P54849 157 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 SRSF9Q13242 221 aaKnown RBP eCLIP3.87□□□□□ -1.79
UBR1-201ENST00000290650 C22orf34Q6ZV56 151 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 AP5S1Q9NUS5 200 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 IGHV3-73A0A0B4J1V6 119 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 A6NDN8 102 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 F2Z2F3 143 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 NDUFA3O95167 84 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 JOSD1Q15040 202 aaPredicted RBP3.87□□□□□ -1.79
UBR1-201ENST00000290650 ZNF664Q8N3J9 261 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 RNASEH2CQ8TDP1 164 aaKnown RBP3.87□□□□□ -1.79
UBR1-201ENST00000290650 TMEM170AQ8WVE7 144 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 NRGNQ92686 78 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 PRB1P04280 392 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 TDGF1P13385 188 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 ERVK11-1P61568 191 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 TCF15Q12870 199 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 ZNF56Q15929 161 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 DNLZQ5SXM8 178 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 DKK4Q9UBT3 224 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 G3V318 75 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 SIGLEC9Q9Y336 463 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 CRXO43186 299 aaPredicted RBP3.87□□□□□ -1.79
UBR1-201ENST00000290650 SRSF7Q16629 238 aaKnown RBP eCLIP3.87□□□□□ -1.79
UBR1-201ENST00000290650 LYPD6BQ8NI32 183 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 C8orf49Q96NF6 230 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 JKAMPQ9P055 326 aa3.87□□□□□ -1.79
UBR1-201ENST00000290650 TRBV24-1A0A075B6N3 115 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 IZUMO1RA6ND01 250 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 PLP1P60201 277 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 FOXL1Q12952 345 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 C5orf30Q96GV9 206 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 PRELID3AQ96N28 172 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 RAI1Q7Z5J4 1906 aaPredicted RBP3.86□□□□□ -1.79
UBR1-201ENST00000290650 TRBV6-6A0A0A6YYG2 114 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 A0A1B0GUT8 65 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 SEM1Q6ZVN7 128 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 NIT1Q86X76 327 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 NUP35Q8NFH5 326 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 SSC4DQ8WTU2 575 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 C17orf77Q96MU5 243 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 TET2Q6N021 2002 aaPredicted RBP3.86□□□□□ -1.79
UBR1-201ENST00000290650 IGHV3-64A0A075B6Q5 118 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 hDV102S1A0JD36 115 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 DGAT2L7PQ6IED9 249 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 CRIP3Q6Q6R5 217 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 ITLN2Q8WWU7 325 aaPredicted RBP3.86□□□□□ -1.79
UBR1-201ENST00000290650 CACNG8Q8WXS5 425 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 PTPRBP23467 1997 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 IGLV3-9A0A075B6K5 115 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 MT-ND6P03923 174 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 PSMB2P49721 201 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 WT1-ASQ06250 92 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 TTC32Q5I0X7 151 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 GPR82Q96P67 336 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 MAP1LC3AQ9H492 121 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 PSG8Q9UQ74 426 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 A0A1B0GW64 132 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 PSMB11A5LHX3 300 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 TCRAP04437 139 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 SAA4P35542 130 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 PSG9Q00887 426 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 TPTE2P1Q5T6R2 138 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 EBLN2Q6P2I7 272 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 OR1N2Q8NGR9 330 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 LINC00477Q96M19 166 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms