RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 OR4C13Q8NGP0 309 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 H1FXQ92522 213 aaKnown RBP8.34□□□□□ -1.07
SKA1-201ENST00000285116 HARBI1Q96MB7 349 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 CCL13Q99616 98 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 MRPL20Q9BYC9 149 aaKnown RBP8.34□□□□□ -1.07
SKA1-201ENST00000285116 ZNF492Q9P255 531 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 HSPB8Q9UJY1 196 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 FAM215AQ9Y5M1 114 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 CGB1A6NKQ9 187 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 COX7A2P2O60397 106 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 IGLV2-23P01705 113 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 FOXA3P55318 350 aaPredicted RBP8.33□□□□□ -1.08
SKA1-201ENST00000285116 UFSP1Q6NVU6 142 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 PATE2Q6UY27 113 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 ZNF841Q6ZN19 808 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 FAM216BQ8N7L0 139 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 TMEM186Q96B77 213 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 RPH3ALQ9UNE2 315 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 TRAV5A0A0B4J249 113 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 TNFRSF13BO14836 293 aaPredicted RBP8.33□□□□□ -1.08
SKA1-201ENST00000285116 SAP30O75446 220 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 COX8AP10176 69 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 RIPPLY3P57055 190 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 FAM201AQ5SY85 155 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 MORN5Q5VZ52 161 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 FLYWCH2Q96CP2 140 aaKnown RBP8.33□□□□□ -1.08
SKA1-201ENST00000285116 FAM231BA6NCW3 169 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 G3V4G9 280 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 PLP1P60201 277 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 BPIFA4PQ86YQ2 179 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 OR10W1Q8NGF6 305 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 MLST8Q9BVC4 326 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 PRSS22Q9GZN4 317 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 GFRA4Q9GZZ7 299 aa8.33□□□□□ -1.08
SKA1-201ENST00000285116 HELZ2Q9BYK8 2649 aaKnown RBP8.32□□□□□ -1.08
SKA1-201ENST00000285116 USP9YO00507 2555 aaPredicted RBP8.32□□□□□ -1.08
SKA1-201ENST00000285116 A8MWL6 223 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 TNFRSF1AP19438 455 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 HTR1DP28221 377 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 WT1-ASQ06250 92 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 LY6DQ14210 128 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 LINC01545Q5VT33 79 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 CFAP161Q6P656 301 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 C2orf91Q6ZV80 131 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 ZADH2Q8N4Q0 377 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 OR10X1Q8NGY0 326 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 AP1S3Q96PC3 154 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 TRGV9Q99603 122 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 NDFIP1Q9BT67 221 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 RPP21Q9H633 154 aaKnown RBP8.32□□□□□ -1.08
SKA1-201ENST00000285116 FNDC4Q9H6D8 234 aaPredicted RBP8.32□□□□□ -1.08
SKA1-201ENST00000285116 TRBV6-1A0A0K0K1D8 114 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 CD40P25942 277 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 MLANAQ16655 118 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 TMEM97Q5BJF2 176 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 RPRMLQ8N4K4 120 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 OR1B1Q8NGR6 318 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 PERPQ96FX8 193 aa8.32□□□□□ -1.08
SKA1-201ENST00000285116 ZFHX3Q15911 3703 aa8.31□□□□□ -1.08
SKA1-201ENST00000285116 EPDR1Q9UM22 224 aa8.31□□□□□ -1.08
SKA1-201ENST00000285116 C9orf118A6NHY6 69 aa8.31□□□□□ -1.08
SKA1-201ENST00000285116 H3BRM9 83 aa8.31□□□□□ -1.08
SKA1-201ENST00000285116 PYYP10082 97 aa8.31□□□□□ -1.08
SKA1-201ENST00000285116 MC5RP33032 325 aa8.31□□□□□ -1.08
SKA1-201ENST00000285116 MRGPRG-AS1Q2M3A8 158 aa8.31□□□□□ -1.08
SKA1-201ENST00000285116 CLEC2AQ6UVW9 174 aa8.31□□□□□ -1.08
SKA1-201ENST00000285116 FMC1Q96HJ9 113 aa8.31□□□□□ -1.08
SKA1-201ENST00000285116 C19orf71A6NCJ1 209 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 A6NDN8 102 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 C22orf46C9J442 243 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 LGALS7P47929 136 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 DLX6P56179 175 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 GPR82Q96P67 336 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 PPIAL4DF5H284 164 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 LTAP01374 205 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 TMEM200BQ69YZ2 307 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 Q6ZS92 163 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 TEX45Q8NA69 505 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 TMEM116Q8NCL8 245 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 GTSF1Q8WW33 167 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 E7EUB6 86 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 NPIPB6E9PJ23 425 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 K7EP34 96 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 CHEK1O14757 476 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 APOBEC3AP31941 199 aaPredicted RBP8.3□□□□□ -1.08
SKA1-201ENST00000285116 SSBP2P81877 361 aaPredicted RBP8.3□□□□□ -1.08
SKA1-201ENST00000285116 VMA21Q3ZAQ7 101 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 RBPMS2Q6ZRY4 209 aaKnown RBP8.3□□□□□ -1.08
SKA1-201ENST00000285116 NPIPB3Q92617 1050 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 DPF1Q92782 380 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 PGLYRP4Q96LB8 373 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 KAAG1Q9UBP8 84 aa8.3□□□□□ -1.08
SKA1-201ENST00000285116 CSPG4Q6UVK1 2322 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 C17orf100A8MU93 164 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 H0Y8G0 127 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 FCN3O75636 299 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 P01737 135 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 HOXB4P17483 251 aaPredicted RBP8.29□□□□□ -1.08
SKA1-201ENST00000285116 CD24P25063 80 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 PRR31Q5SQ13 230 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms