RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 A0A0D9SG52 128 aa1.97□□□□□ -2.09
CHD1-201ENST00000284049 ZNF705BP0CI00 300 aaPredicted RBP1.97□□□□□ -2.09
CHD1-201ENST00000284049 RPS4Y1P22090 263 aaKnown RBP1.97□□□□□ -2.09
CHD1-201ENST00000284049 DNAJB13P59910 316 aa1.97□□□□□ -2.09
CHD1-201ENST00000284049 UBE2BP63146 152 aa1.97□□□□□ -2.09
CHD1-201ENST00000284049 ZNF181Q2M3W8 571 aa1.97□□□□□ -2.09
CHD1-201ENST00000284049 ZNF678Q5SXM1 525 aa1.97□□□□□ -2.09
CHD1-201ENST00000284049 ZFP62Q8NB50 900 aaPredicted RBP1.97□□□□□ -2.09
CHD1-201ENST00000284049 IMMP2LQ96T52 175 aa1.97□□□□□ -2.09
CHD1-201ENST00000284049 SPIN2AQ99865 258 aa1.97□□□□□ -2.09
CHD1-201ENST00000284049 SPIN2BQ9BPZ2 258 aa1.97□□□□□ -2.09
CHD1-201ENST00000284049 ZNF823P16415 610 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 NFYAP23511 347 aaPredicted RBP1.96□□□□□ -2.1
CHD1-201ENST00000284049 PLCXD2Q0VAA5 305 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 TMEM106AQ96A25 262 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 PRELID3AQ96N28 172 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 PDFQ9HBH1 243 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 MRPL16Q9NX20 251 aaKnown RBP1.96□□□□□ -2.1
CHD1-201ENST00000284049 ANKRD36A6QL64 1941 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 IGHV3-73A0A0B4J1V6 119 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 OR2T8A6NH00 312 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 RAB5CP51148 216 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 COL10A1Q03692 680 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 ZNF101Q8IZC7 436 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 BRK1Q8WUW1 75 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 EPDR1Q9UM22 224 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 NUP205Q92621 2012 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 IGLV3-16A0A075B6K0 115 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 LST1O00453 97 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 IGLV1-47P01700 117 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 IGLV2-8P01709 118 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 RPS10P46783 165 aaKnown RBP1.96□□□□□ -2.1
CHD1-201ENST00000284049 POLR2HP52434 150 aaKnown RBP1.96□□□□□ -2.1
CHD1-201ENST00000284049 FUT5Q11128 374 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 C1orf140Q5VVS0 124 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 MIR17HGQ75NE6 70 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 OR10P1Q8NGE3 313 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 NPCDR1Q9BY65 106 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 OR8D2Q9GZM6 311 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 TMEM191AQ9H0A3 160 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 TAF9BQ9HBM6 251 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 CA10Q9NS85 328 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 MEIKINA0A087WXM9 373 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 PIGBOS1A0A0B4J2F0 54 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 SMIM31A0A1B0GVY4 71 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 H3BMG7 143 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 ISLRO14498 428 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 CSN2P05814 226 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 ZNF883P0CG24 379 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 TPT1P13693 172 aaKnown RBP1.96□□□□□ -2.1
CHD1-201ENST00000284049 KRTAP27-1Q3LI81 207 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 LYPD2Q6UXB3 125 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 LINC01555Q8NAE3 123 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 OR4B1Q8NGF8 309 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 RAB37Q96AX2 223 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 HS3ST2Q9Y278 367 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 AMMECR1Q9Y4X0 333 aaPredicted RBP1.96□□□□□ -2.1
CHD1-201ENST00000284049 ICE1Q9Y2F5 2266 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.96□□□□□ -2.1
CHD1-201ENST00000284049 LOC102725191A0A1B0GVB3 256 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 EPM2AB3EWF7 344 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 PHOX2AO14813 284 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 DAPP51397 102 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 ZNF79Q15937 498 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 FAM104BQ5XKR9 115 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 HRCT1Q6UXD1 115 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 ZNF329Q86UD4 541 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 APCDD1LQ8NCL9 501 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 OR10D4PQ8NGN7 298 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 OR5C1Q8NGR4 320 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 HIST1H2BLQ99880 126 aa1.96□□□□□ -2.1
CHD1-201ENST00000284049 SOX21Q9Y651 276 aaPredicted RBP1.96□□□□□ -2.1
CHD1-201ENST00000284049 FLG2Q5D862 2391 aaPredicted RBP1.95□□□□□ -2.1
CHD1-201ENST00000284049 PLA2G10O15496 165 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 HIST1H2BKO60814 126 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 IGF2P01344 180 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 HIST1H2BJP06899 126 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 NPPCP23582 126 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 HIST1H1AQ02539 215 aaPredicted RBP1.95□□□□□ -2.1
CHD1-201ENST00000284049 DEFB116Q30KQ4 102 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 VMA21Q3ZAQ7 101 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 C18orf65Q6ZTR6 163 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 C10orf126Q8N4M7 172 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 SORL1Q92673 2214 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 ABCA4P78363 2273 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 IGKV3D-20A0A0C4DH25 116 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 C19orf84I3L1E1 186 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 IGKV1-39P01597 117 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 IGKV1D-39P04432 117 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 CFC1BP0CG36 223 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 HIST1H1BP16401 226 aaKnown RBP1.95□□□□□ -2.1
CHD1-201ENST00000284049 ELSPBP1Q96BH3 223 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 ADAT3Q96EY9 351 aaPredicted RBP1.95□□□□□ -2.1
CHD1-201ENST00000284049 PYGO2Q9BRQ0 406 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 SNRNP25Q9BV90 132 aaKnown RBP1.95□□□□□ -2.1
CHD1-201ENST00000284049 EML5Q05BV3 1969 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 ODAMA1E959 279 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 ZNF860A6NHJ4 632 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 GNG7O60262 68 aa1.95□□□□□ -2.1
CHD1-201ENST00000284049 APODP05090 189 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms