RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 CFHR3Q02985 330 aa10.24□□□□□ -0.77
ACER3-201ENST00000278544 RPEL1Q2QD12 228 aa10.24□□□□□ -0.77
ACER3-201ENST00000278544 IGHV4OR15-8A0A075B7B6 117 aa10.23□□□□□ -0.77
ACER3-201ENST00000278544 A0A087WW49 117 aa10.23□□□□□ -0.77
ACER3-201ENST00000278544 GGTLC3B5MD39 225 aa10.23□□□□□ -0.77
ACER3-201ENST00000278544 SLC17A3O00476 420 aa10.23□□□□□ -0.77
ACER3-201ENST00000278544 KHDC3LQ587J8 217 aa10.23□□□□□ -0.77
ACER3-201ENST00000278544 PRDM13Q9H4Q3 707 aa10.23□□□□□ -0.77
ACER3-201ENST00000278544 PGPA6NDG6 321 aa10.23□□□□□ -0.77
ACER3-201ENST00000278544 FAM223BA6NKX1 122 aa10.23□□□□□ -0.77
ACER3-201ENST00000278544 FAM223AQ8IWN6 122 aa10.23□□□□□ -0.77
ACER3-201ENST00000278544 TEX29Q8N6K0 151 aa10.23□□□□□ -0.77
ACER3-201ENST00000278544 PEF1Q9UBV8 284 aaKnown RBP10.23□□□□□ -0.77
ACER3-201ENST00000278544 FAM74A7A6NL05 159 aa10.23□□□□□ -0.77
ACER3-201ENST00000278544 HILS1P60008 231 aa10.23□□□□□ -0.77
ACER3-201ENST00000278544 BTN1A1Q13410 526 aa10.23□□□□□ -0.77
ACER3-201ENST00000278544 CITED2Q99967 270 aaPredicted RBP10.23□□□□□ -0.77
ACER3-201ENST00000278544 MRPL27Q9P0M9 148 aaKnown RBP10.23□□□□□ -0.77
ACER3-201ENST00000278544 FBN1P35555 2871 aaKnown RBP10.22□□□□□ -0.77
ACER3-201ENST00000278544 TRAV1-1A0A0B4J248 108 aa10.22□□□□□ -0.77
ACER3-201ENST00000278544 ZNF785A8K8V0 405 aa10.22□□□□□ -0.77
ACER3-201ENST00000278544 ZNF727A8MUV8 499 aa10.22□□□□□ -0.77
ACER3-201ENST00000278544 FABP1P07148 127 aa10.22□□□□□ -0.77
ACER3-201ENST00000278544 ZNF506Q5JVG8 444 aa10.22□□□□□ -0.77
ACER3-201ENST00000278544 FXYD5Q96DB9 178 aa10.22□□□□□ -0.77
ACER3-201ENST00000278544 SMIM7Q9BQ49 75 aa10.22□□□□□ -0.77
ACER3-201ENST00000278544 ZNF586Q9NXT0 402 aa10.22□□□□□ -0.77
ACER3-201ENST00000278544 TRAV8-1A0A0A6YYK1 113 aa10.22□□□□□ -0.77
ACER3-201ENST00000278544 A0A0G2JLM5 398 aa10.22□□□□□ -0.77
ACER3-201ENST00000278544 YPEL3P61236 119 aaPredicted RBP10.22□□□□□ -0.77
ACER3-201ENST00000278544 PQLC2Q6ZP29 291 aa10.22□□□□□ -0.77
ACER3-201ENST00000278544 RNF182Q8N6D2 247 aa10.22□□□□□ -0.77
ACER3-201ENST00000278544 OR11H1Q8NG94 326 aa10.22□□□□□ -0.77
ACER3-201ENST00000278544 ZNF414Q96IQ9 312 aa10.22□□□□□ -0.77
ACER3-201ENST00000278544 SLC25A5P05141 298 aaKnown RBP10.21□□□□□ -0.77
ACER3-201ENST00000278544 ZP3P21754 424 aa10.21□□□□□ -0.77
ACER3-201ENST00000278544 ADIRFQ15847 76 aa10.21□□□□□ -0.77
ACER3-201ENST00000278544 SHANK2-AS3Q9BTD1 123 aa10.21□□□□□ -0.77
ACER3-201ENST00000278544 ZFAND3Q9H8U3 227 aa10.21□□□□□ -0.77
ACER3-201ENST00000278544 WI2-2373I1.2A0A1W2PRP0 233 aa10.21□□□□□ -0.78
ACER3-201ENST00000278544 ZNF705FA8MVS1 300 aaPredicted RBP10.21□□□□□ -0.78
ACER3-201ENST00000278544 METTL26Q96S19 204 aa10.21□□□□□ -0.78
ACER3-201ENST00000278544 ELOVL1Q9BW60 279 aa10.21□□□□□ -0.78
ACER3-201ENST00000278544 PARLQ9H300 379 aa10.21□□□□□ -0.78
ACER3-201ENST00000278544 RNF114Q9Y508 228 aa10.21□□□□□ -0.78
ACER3-201ENST00000278544 CLPSL1A2RUU4 121 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 KRBOX1C9JBD0 128 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 SCGB2A1O75556 95 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 BPIFA4PQ86YQ2 179 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 USMG5Q96IX5 58 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 AGRNO00468 2067 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 TCF21O43680 179 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 ZNF705DP0CH99 300 aaPredicted RBP10.2□□□□□ -0.78
ACER3-201ENST00000278544 ZNF705BP0CI00 300 aaPredicted RBP10.2□□□□□ -0.78
ACER3-201ENST00000278544 CBLN2Q8IUK8 224 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 DPF1Q92782 380 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 RPS10P5Q9NQ39 176 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 GP9P14770 177 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 CRIP2P52943 208 aaPredicted RBP10.2□□□□□ -0.78
ACER3-201ENST00000278544 ZNF343Q6P1L6 599 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 UQCC3Q6UW78 93 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 EIF4E3Q8N5X7 224 aaKnown RBP10.2□□□□□ -0.78
ACER3-201ENST00000278544 COMMD1Q8N668 190 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 OR4F17Q8NGA8 305 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 ISOC2Q96AB3 205 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 MRPL32Q9BYC8 188 aaKnown RBP10.2□□□□□ -0.78
ACER3-201ENST00000278544 TMA7Q9Y2S6 64 aaKnown RBP10.2□□□□□ -0.78
ACER3-201ENST00000278544 URGCP-MRPS24S4R325 110 aa10.2□□□□□ -0.78
ACER3-201ENST00000278544 H3BRN7 92 aa10.19□□□□□ -0.78
ACER3-201ENST00000278544 GGCTO75223 188 aaKnown RBP10.19□□□□□ -0.78
ACER3-201ENST00000278544 RNASE1P07998 156 aaKnown RBP10.19□□□□□ -0.78
ACER3-201ENST00000278544 HOXD3P31249 432 aaPredicted RBP10.19□□□□□ -0.78
ACER3-201ENST00000278544 RELQ04864 619 aaPredicted RBP10.19□□□□□ -0.78
ACER3-201ENST00000278544 FAM90A2PQ658T7 463 aa10.19□□□□□ -0.78
ACER3-201ENST00000278544 Q9H3A6 140 aa10.19□□□□□ -0.78
ACER3-201ENST00000278544 MANBALQ9NQG1 85 aa10.19□□□□□ -0.78
ACER3-201ENST00000278544 TMEM167BQ9NRX6 74 aa10.19□□□□□ -0.78
ACER3-201ENST00000278544 AWAT1Q58HT5 328 aa10.19□□□□□ -0.78
ACER3-201ENST00000278544 WFDC12Q8WWY7 111 aa10.19□□□□□ -0.78
ACER3-201ENST00000278544 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.18□□□□□ -0.78
ACER3-201ENST00000278544 CRLF1O75462 422 aa10.18□□□□□ -0.78
ACER3-201ENST00000278544 PRR27Q6MZM9 219 aa10.18□□□□□ -0.78
ACER3-201ENST00000278544 STXBP6Q8NFX7 210 aa10.18□□□□□ -0.78
ACER3-201ENST00000278544 TXN2Q99757 166 aa10.18□□□□□ -0.78
ACER3-201ENST00000278544 J3KRW8 73 aa10.18□□□□□ -0.78
ACER3-201ENST00000278544 SCGB2A2Q13296 93 aa10.18□□□□□ -0.78
ACER3-201ENST00000278544 RNF2Q99496 336 aa10.18□□□□□ -0.78
ACER3-201ENST00000278544 NIPSNAP3BQ9BS92 247 aa10.18□□□□□ -0.78
ACER3-201ENST00000278544 MGST1P10620 155 aaKnown RBP10.17□□□□□ -0.78
ACER3-201ENST00000278544 ATF4P18848 351 aaPredicted RBP10.17□□□□□ -0.78
ACER3-201ENST00000278544 OR5I1Q13606 314 aa10.17□□□□□ -0.78
ACER3-201ENST00000278544 FAM74A3Q4VXF1 159 aa10.17□□□□□ -0.78
ACER3-201ENST00000278544 C19orf24Q9BVV8 132 aa10.17□□□□□ -0.78
ACER3-201ENST00000278544 RHPN1-AS1Q9BWJ2 59 aa10.17□□□□□ -0.78
ACER3-201ENST00000278544 SMAD5-AS1Q9Y6J3 95 aa10.17□□□□□ -0.78
ACER3-201ENST00000278544 FOXE3Q13461 319 aa10.17□□□□□ -0.78
ACER3-201ENST00000278544 GOLT1AQ6ZVE7 132 aa10.17□□□□□ -0.78
ACER3-201ENST00000278544 CCDC28AQ8IWP9 274 aa10.17□□□□□ -0.78
ACER3-201ENST00000278544 TRBV20OR9-2A0A075B6H5 130 aa10.17□□□□□ -0.78
ACER3-201ENST00000278544 BUB3O43684 328 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms