RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 SLC25A48Q6ZT89 311 aaKnown RBP8.27□□□□□ -1.09
UPF3B-201ENST00000276201 WFDC11Q8NEX6 87 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 VWC2LB2RUY7 222 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 COX7A2P2O60397 106 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 GATA4P43694 442 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 ATP5J2P56134 94 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 SEC11AP67812 179 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 ERHP84090 104 aaKnown RBP8.26□□□□□ -1.09
UPF3B-201ENST00000276201 PAX2Q02962 417 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 LINC01545Q5VT33 79 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 TCF24Q7RTU0 167 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 KIR3DL3Q8N743 410 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 H1FXQ92522 213 aaKnown RBP8.26□□□□□ -1.09
UPF3B-201ENST00000276201 FMC1Q96HJ9 113 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 HSPB8Q9UJY1 196 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 ARFGEF3Q5TH69 2177 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
UPF3B-201ENST00000276201 NDUFS7O75251 213 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 LEPROTL1O95214 131 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 IGHV4-39P01824 125 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 CT45A6P0DMU7 189 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 CT45A5P0DMU8 189 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 CT45A7P0DMV0 189 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 FOXA3P55318 350 aaPredicted RBP8.26□□□□□ -1.09
UPF3B-201ENST00000276201 PATE2Q6UY27 113 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 ZNF833PQ6ZTB9 187 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 Q6ZVH6 145 aa8.26□□□□□ -1.09
UPF3B-201ENST00000276201 PEF1Q9UBV8 284 aaKnown RBP8.26□□□□□ -1.09
UPF3B-201ENST00000276201 K7ERU9 68 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 HAX1O00165 279 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 NUDT3O95989 172 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 LTAP01374 205 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 GATA2P23769 480 aaPredicted RBP8.25□□□□□ -1.09
UPF3B-201ENST00000276201 GLRXP35754 106 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 TMEM177Q53S58 311 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 MORN5Q5VZ52 161 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 PRSS57Q6UWY2 283 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 ZNF841Q6ZN19 808 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 RBPMS2Q6ZRY4 209 aaKnown RBP8.25□□□□□ -1.09
UPF3B-201ENST00000276201 MOB3BQ86TA1 216 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 OR2Z1Q8NG97 314 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 OR2T6Q8NHC8 308 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 MAP1LC3CQ9BXW4 147 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 CLEC5AQ9NY25 188 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 TEP1Q99973 2627 aaKnown RBP8.25□□□□□ -1.09
UPF3B-201ENST00000276201 LOC102724200A0A096LPH7 203 aaPredicted RBP8.25□□□□□ -1.09
UPF3B-201ENST00000276201 TRAV5A0A0B4J249 113 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 A0A1B0GW15 77 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 B9A039 149 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 IGHV3-13P01766 116 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 COL8A2P25067 703 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 SUB1P53999 127 aaKnown RBP eCLIP8.25□□□□□ -1.099e-7■■■□□ 17.7
UPF3B-201ENST00000276201 ZCCHC24Q8N2G6 241 aaKnown RBP8.25□□□□□ -1.09
UPF3B-201ENST00000276201 TMEM167AQ8TBQ9 72 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 RPUSD1Q9UJJ7 312 aaKnown RBP8.25□□□□□ -1.09
UPF3B-201ENST00000276201 WASHC3Q9Y3C0 194 aa8.25□□□□□ -1.09
UPF3B-201ENST00000276201 ACANP16112 2415 aa8.24□□□□□ -1.09
UPF3B-201ENST00000276201 IGKV1D-37A0A075B6S9 117 aa8.24□□□□□ -1.09
UPF3B-201ENST00000276201 SAA1P0DJI8 122 aaPredicted RBP8.24□□□□□ -1.09
UPF3B-201ENST00000276201 COX8AP10176 69 aa8.24□□□□□ -1.09
UPF3B-201ENST00000276201 MYOD1P15172 320 aa8.24□□□□□ -1.09
UPF3B-201ENST00000276201 HOXA4Q00056 320 aaPredicted RBP8.24□□□□□ -1.09
UPF3B-201ENST00000276201 C5orf17Q8NAS9 161 aa8.24□□□□□ -1.09
UPF3B-201ENST00000276201 LINC00479Q96M42 142 aa8.24□□□□□ -1.09
UPF3B-201ENST00000276201 HINT2Q9BX68 163 aa8.24□□□□□ -1.09
UPF3B-201ENST00000276201 FZR1Q9UM11 496 aa8.24□□□□□ -1.09
UPF3B-201ENST00000276201 CRYGCP07315 174 aa8.24□□□□□ -1.09
UPF3B-201ENST00000276201 GPR6P46095 362 aaPredicted RBP8.24□□□□□ -1.09
UPF3B-201ENST00000276201 PLP1P60201 277 aa8.24□□□□□ -1.09
UPF3B-201ENST00000276201 ARF6P62330 175 aa8.24□□□□□ -1.09
UPF3B-201ENST00000276201 PDPNQ86YL7 162 aa8.24□□□□□ -1.09
UPF3B-201ENST00000276201 Q96MF0 132 aa8.24□□□□□ -1.09
UPF3B-201ENST00000276201 TMUB1Q9BVT8 246 aa8.24□□□□□ -1.09
UPF3B-201ENST00000276201 VPS13CQ709C8 3753 aa8.23□□□□□ -1.09
UPF3B-201ENST00000276201 VSTM5A8MXK1 200 aa8.23□□□□□ -1.09
UPF3B-201ENST00000276201 APOHP02749 345 aaPredicted RBP8.23□□□□□ -1.09
UPF3B-201ENST00000276201 IGLC1P0CG04 106 aa8.23□□□□□ -1.09
UPF3B-201ENST00000276201 C8orf31Q8N9H6 132 aa8.23□□□□□ -1.09
UPF3B-201ENST00000276201 OR1N2Q8NGR9 330 aa8.23□□□□□ -1.09
UPF3B-201ENST00000276201 VSTM2AQ8TAG5 236 aa8.23□□□□□ -1.09
UPF3B-201ENST00000276201 TRGV9Q99603 122 aa8.23□□□□□ -1.09
UPF3B-201ENST00000276201 SSBP4Q9BWG4 385 aaPredicted RBP8.23□□□□□ -1.09
UPF3B-201ENST00000276201 CSTL1Q9H114 145 aa8.23□□□□□ -1.09
UPF3B-201ENST00000276201 MUC21A0A0G2JKD1 596 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 MUC21A0A140T8X8 626 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 CORTO00230 105 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 APOA2P02652 100 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 PYYP10082 97 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 PSG1P11464 419 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 HOXB4P17483 251 aaPredicted RBP8.22□□□□□ -1.09
UPF3B-201ENST00000276201 GPR183P32249 361 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 CAMPP49913 170 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 PSG9Q00887 426 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 MUC21Q5SSG8 566 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 LDLRAD2Q5SZI1 272 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 ETFRF1Q6IPR1 90 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 ZNRF1Q8ND25 227 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 OR5AN1Q8NGI8 311 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 OR10X1Q8NGY0 326 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 GTSF1Q8WW33 167 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms