RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 TRAV5A0A0B4J249 113 aa12.98□□□□□ -0.33
SKP2-201ENST00000274254 WIPF1O43516 503 aa12.98□□□□□ -0.33
SKP2-201ENST00000274254 IGLL1P15814 213 aa12.98□□□□□ -0.33
SKP2-201ENST00000274254 OR8I2Q8N0Y5 310 aa12.98□□□□□ -0.33
SKP2-201ENST00000274254 FAM167A-AS1Q96KT0 104 aa12.98□□□□□ -0.33
SKP2-201ENST00000274254 A0A1W2PPV4 95 aa12.98□□□□□ -0.33
SKP2-201ENST00000274254 CD5P06127 495 aa12.98□□□□□ -0.33
SKP2-201ENST00000274254 CD300EQ496F6 205 aaPredicted RBP12.98□□□□□ -0.33
SKP2-201ENST00000274254 FAM122CQ6P4D5 195 aa12.98□□□□□ -0.33
SKP2-201ENST00000274254 GPR82Q96P67 336 aa12.98□□□□□ -0.33
SKP2-201ENST00000274254 SELENOKQ9Y6D0 94 aa12.98□□□□□ -0.33
SKP2-201ENST00000274254 DNHD1Q96M86 4753 aa12.97□□□□□ -0.33
SKP2-201ENST00000274254 MRPS12O15235 138 aaKnown RBP12.97□□□□□ -0.33
SKP2-201ENST00000274254 CDC34P49427 236 aaPredicted RBP12.97□□□□□ -0.33
SKP2-201ENST00000274254 SULT1A2P50226 295 aa12.97□□□□□ -0.33
SKP2-201ENST00000274254 ZNF726P1Q15940 193 aa12.97□□□□□ -0.33
SKP2-201ENST00000274254 ALKAL2Q6UX46 152 aa12.97□□□□□ -0.33
SKP2-201ENST00000274254 TCF24Q7RTU0 167 aa12.97□□□□□ -0.33
SKP2-201ENST00000274254 RAB24Q969Q5 203 aa12.97□□□□□ -0.33
SKP2-201ENST00000274254 SLC25A2Q9BXI2 301 aa12.97□□□□□ -0.33
SKP2-201ENST00000274254 ACTR3CQ9C0K3 210 aaPredicted RBP12.97□□□□□ -0.33
SKP2-201ENST00000274254 HELTA6NFD8 242 aa12.96□□□□□ -0.33
SKP2-201ENST00000274254 RPL7P18124 248 aaKnown RBP12.96□□□□□ -0.33
SKP2-201ENST00000274254 FHITP49789 147 aa12.96□□□□□ -0.33
SKP2-201ENST00000274254 RAB5CP51148 216 aa12.96□□□□□ -0.33
SKP2-201ENST00000274254 DPPA3Q6W0C5 159 aa12.96□□□□□ -0.33
SKP2-201ENST00000274254 SIGLEC15Q6ZMC9 328 aa12.96□□□□□ -0.33
SKP2-201ENST00000274254 TMEM61Q8N0U2 210 aa12.96□□□□□ -0.33
SKP2-201ENST00000274254 OR2K2Q8NGT1 345 aa12.96□□□□□ -0.33
SKP2-201ENST00000274254 GPR61Q9BZJ8 451 aa12.96□□□□□ -0.33
SKP2-201ENST00000274254 MGAM2Q2M2H8 2515 aa12.95□□□□□ -0.34
SKP2-201ENST00000274254 TRAV25A0A0B4J276 109 aa12.95□□□□□ -0.34
SKP2-201ENST00000274254 EIF3GO75821 320 aaKnown RBP eCLIP12.95□□□□□ -0.34
SKP2-201ENST00000274254 GP9P14770 177 aa12.95□□□□□ -0.34
SKP2-201ENST00000274254 TAS2R45P59539 299 aa12.95□□□□□ -0.34
SKP2-201ENST00000274254 FAM74A1Q5RGS3 127 aa12.95□□□□□ -0.34
SKP2-201ENST00000274254 TEX261Q6UWH6 196 aa12.95□□□□□ -0.34
SKP2-201ENST00000274254 SSX7Q7RTT5 188 aa12.95□□□□□ -0.34
SKP2-201ENST00000274254 BPIFA4PQ86YQ2 179 aa12.95□□□□□ -0.34
SKP2-201ENST00000274254 TMEM14CQ9P0S9 112 aa12.95□□□□□ -0.34
SKP2-201ENST00000274254 SMAD5-AS1Q9Y6J3 95 aa12.95□□□□□ -0.34
SKP2-201ENST00000274254 SORL1Q92673 2214 aa12.95□□□□□ -0.34
SKP2-201ENST00000274254 CTXND1A0A1B0GTU2 59 aa12.94□□□□□ -0.34
SKP2-201ENST00000274254 IZUMO1RA6ND01 250 aa12.94□□□□□ -0.34
SKP2-201ENST00000274254 TSPAN4O14817 238 aa12.94□□□□□ -0.34
SKP2-201ENST00000274254 STAG3L2P0CL84 134 aa12.94□□□□□ -0.34
SKP2-201ENST00000274254 STAG3L3P0CL85 134 aa12.94□□□□□ -0.34
SKP2-201ENST00000274254 GALR1P47211 349 aa12.94□□□□□ -0.34
SKP2-201ENST00000274254 KHDC3LQ587J8 217 aa12.94□□□□□ -0.34
SKP2-201ENST00000274254 ZNF503Q96F45 646 aa12.94□□□□□ -0.34
SKP2-201ENST00000274254 C17orf77Q96MU5 243 aa12.94□□□□□ -0.34
SKP2-201ENST00000274254 HMGB3O15347 200 aaKnown RBP12.93□□□□□ -0.34
SKP2-201ENST00000274254 OXLD1Q5BKU9 147 aa12.93□□□□□ -0.34
SKP2-201ENST00000274254 STXBP6Q8NFX7 210 aa12.93□□□□□ -0.34
SKP2-201ENST00000274254 FAM213BQ8TBF2 198 aa12.93□□□□□ -0.34
SKP2-201ENST00000274254 CMYA5Q8N3K9 4069 aa12.93□□□□□ -0.34
SKP2-201ENST00000274254 IGLC2P0DOY2 106 aa12.93□□□□□ -0.34
SKP2-201ENST00000274254 RPL11P62913 178 aaKnown RBP12.93□□□□□ -0.34
SKP2-201ENST00000274254 LCN12Q6JVE5 192 aa12.93□□□□□ -0.34
SKP2-201ENST00000274254 PQLC2Q6ZP29 291 aa12.93□□□□□ -0.34
SKP2-201ENST00000274254 RBPMS2Q6ZRY4 209 aaKnown RBP12.93□□□□□ -0.34
SKP2-201ENST00000274254 ZNF680Q8NEM1 530 aa12.93□□□□□ -0.34
SKP2-201ENST00000274254 OR51M1Q9H341 326 aa12.93□□□□□ -0.34
SKP2-201ENST00000274254 HRH4Q9H3N8 390 aa12.93□□□□□ -0.34
SKP2-201ENST00000274254 A0A087X0K7 114 aa12.92□□□□□ -0.34
SKP2-201ENST00000274254 OR7C2O60412 319 aa12.92□□□□□ -0.34
SKP2-201ENST00000274254 PYYP10082 97 aa12.92□□□□□ -0.34
SKP2-201ENST00000274254 RNF141Q8WVD5 230 aa12.92□□□□□ -0.34
SKP2-201ENST00000274254 MBD3L1Q8WWY6 194 aa12.92□□□□□ -0.34
SKP2-201ENST00000274254 SPAG8Q99932 426 aaPredicted RBP12.92□□□□□ -0.34
SKP2-201ENST00000274254 PAXXQ9BUH6 204 aa12.92□□□□□ -0.34
SKP2-201ENST00000274254 MS4A6AQ9H2W1 248 aa12.92□□□□□ -0.34
SKP2-201ENST00000274254 NRN1Q9NPD7 142 aa12.92□□□□□ -0.34
SKP2-201ENST00000274254 IGKV3-7A0A075B6H7 116 aa12.91□□□□□ -0.34
SKP2-201ENST00000274254 ZNF785A8K8V0 405 aa12.91□□□□□ -0.34
SKP2-201ENST00000274254 H3BQ15 152 aa12.91□□□□□ -0.34
SKP2-201ENST00000274254 ARL14EPLP0DKL9 152 aa12.91□□□□□ -0.34
SKP2-201ENST00000274254 HIST1H1EP10412 219 aaKnown RBP12.91□□□□□ -0.34
SKP2-201ENST00000274254 SAMD5Q5TGI4 173 aa12.91□□□□□ -0.34
SKP2-201ENST00000274254 DCANP1Q8TF63 244 aa12.91□□□□□ -0.34
SKP2-201ENST00000274254 FXYD5Q96DB9 178 aa12.91□□□□□ -0.34
SKP2-201ENST00000274254 TRAV2A0A0B4J234 112 aa12.9□□□□□ -0.34
SKP2-201ENST00000274254 MAP1LC3B2A6NCE7 125 aa12.9□□□□□ -0.34
SKP2-201ENST00000274254 CXorf1O96002 111 aa12.9□□□□□ -0.34
SKP2-201ENST00000274254 ATF4P18848 351 aaPredicted RBP12.9□□□□□ -0.34
SKP2-201ENST00000274254 MEOX2P50222 304 aa12.9□□□□□ -0.34
SKP2-201ENST00000274254 PAFAH1B2P68402 229 aa12.9□□□□□ -0.34
SKP2-201ENST00000274254 EGFEM1PQ0D2K5 195 aa12.9□□□□□ -0.34
SKP2-201ENST00000274254 LCN15Q6UWW0 184 aa12.9□□□□□ -0.34
SKP2-201ENST00000274254 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.9□□□□□ -0.34
SKP2-201ENST00000274254 GBGT1Q8N5D6 347 aa12.9□□□□□ -0.34
SKP2-201ENST00000274254 MAP1LC3BQ9GZQ8 125 aa12.9□□□□□ -0.34
SKP2-201ENST00000274254 ZNF586Q9NXT0 402 aa12.9□□□□□ -0.34
SKP2-201ENST00000274254 ZNF256Q9Y2P7 627 aaPredicted RBP12.9□□□□□ -0.34
SKP2-201ENST00000274254 G3V4G9 280 aa12.89□□□□□ -0.35
SKP2-201ENST00000274254 SOCS3O14543 225 aa12.89□□□□□ -0.35
SKP2-201ENST00000274254 IFNA7P01567 189 aa12.89□□□□□ -0.35
SKP2-201ENST00000274254 OR10J4P0C629 311 aa12.89□□□□□ -0.35
SKP2-201ENST00000274254 ZNF705EA8MWA4 302 aaPredicted RBP12.88□□□□□ -0.35
SKP2-201ENST00000274254 K7EQG2 157 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms