RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 ZFP30Q9Y2G7 519 aa9.84□□□□□ -0.83
CAPN9-201ENST00000271971 G3V318 75 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 Q0VG73 95 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 RNASE8Q8TDE3 154 aaKnown RBP9.83□□□□□ -0.84
CAPN9-201ENST00000271971 TMUB1Q9BVT8 246 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 DNAJC4Q9NNZ3 241 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 LINC00527Q9UJ94 153 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 CUBNO60494 3623 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 IGKV1D-37A0A075B6S9 117 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 NPIPB5A8MRT5 1133 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 I3L2K1 104 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 CRYGCP07315 174 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 ADMP35318 185 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 ZNF90Q03938 601 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 RAB31Q13636 194 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 SGMS2Q8NHU3 365 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 ZNF48Q96MX3 618 aaPredicted RBP9.83□□□□□ -0.84
CAPN9-201ENST00000271971 VAMP8Q9BV40 100 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 TP53TG3Q9ULZ0 132 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 SLC45A2Q9UMX9 530 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 ANK3Q12955 4377 aaKnown RBP9.83□□□□□ -0.84
CAPN9-201ENST00000271971 MTORP42345 2549 aa9.83□□□□□ -0.84
CAPN9-201ENST00000271971 K7EIM0 57 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 CORTO00230 105 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 LINC00310P59036 64 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 PRR20EP86478 221 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 PRR20CP86479 221 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 PRR20DP86480 221 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 PRR20BP86481 221 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 PRR20AP86496 221 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 BATFQ16520 125 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 CST9LP1Q5W188 147 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 UNQ5815/PRO19632Q6UWF5 114 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 OR4B1Q8NGF8 309 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 SFRP2Q96HF1 295 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 FANCD2OSQ96PS1 177 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 LINC00869P0C866 280 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 CDC34P49427 236 aaPredicted RBP9.82□□□□□ -0.84
CAPN9-201ENST00000271971 KRTAP1-1Q07627 177 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 SAPCD1Q5SSQ6 148 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 Q6ZS46 218 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 TTC9CQ8N5M4 171 aa9.82□□□□□ -0.84
CAPN9-201ENST00000271971 IGLV11-55A0A075B6I3 123 aa9.81□□□□□ -0.84
CAPN9-201ENST00000271971 TRBV9A0A0B4J1U6 114 aa9.81□□□□□ -0.84
CAPN9-201ENST00000271971 BPIFB3P59826 476 aa9.81□□□□□ -0.84
CAPN9-201ENST00000271971 BLCAPP62952 87 aa9.81□□□□□ -0.84
CAPN9-201ENST00000271971 ETFRF1Q6IPR1 90 aa9.81□□□□□ -0.84
CAPN9-201ENST00000271971 OR5AU1Q8NGC0 362 aa9.81□□□□□ -0.84
CAPN9-201ENST00000271971 FLNBO75369 2602 aaKnown RBP9.81□□□□□ -0.84
CAPN9-201ENST00000271971 OR2J3O76001 311 aa9.81□□□□□ -0.84
CAPN9-201ENST00000271971 NDUFB8O95169 186 aa9.81□□□□□ -0.84
CAPN9-201ENST00000271971 IER3P46695 156 aa9.81□□□□□ -0.84
CAPN9-201ENST00000271971 COTL1Q14019 142 aa9.81□□□□□ -0.84
CAPN9-201ENST00000271971 SPATA31B1PQ5VZV4 182 aa9.81□□□□□ -0.84
CAPN9-201ENST00000271971 THAP8Q8NA92 274 aa9.81□□□□□ -0.84
CAPN9-201ENST00000271971 PAM16Q9Y3D7 125 aa9.81□□□□□ -0.84
CAPN9-201ENST00000271971 IGHV3-23P01764 117 aa9.8□□□□□ -0.84
CAPN9-201ENST00000271971 CRISP2P16562 243 aa9.8□□□□□ -0.84
CAPN9-201ENST00000271971 TMEM116Q8NCL8 245 aa9.8□□□□□ -0.84
CAPN9-201ENST00000271971 OR10G8Q8NGN5 311 aa9.8□□□□□ -0.84
CAPN9-201ENST00000271971 RNF2Q99496 336 aa9.8□□□□□ -0.84
CAPN9-201ENST00000271971 SEPSECSQ9HD40 501 aaKnown RBP9.8□□□□□ -0.84
CAPN9-201ENST00000271971 IL36BQ9NZH7 164 aa9.8□□□□□ -0.84
CAPN9-201ENST00000271971 LY96Q9Y6Y9 160 aa9.8□□□□□ -0.84
CAPN9-201ENST00000271971 TCRBV4S1A1TA0A5B7 111 aa9.8□□□□□ -0.84
CAPN9-201ENST00000271971 C9orf139Q6ZV77 190 aa9.8□□□□□ -0.84
CAPN9-201ENST00000271971 SERF1AO75920 110 aa9.79□□□□□ -0.84
CAPN9-201ENST00000271971 NDUFB4O95168 129 aa9.79□□□□□ -0.84
CAPN9-201ENST00000271971 CTRLP40313 264 aa9.79□□□□□ -0.84
CAPN9-201ENST00000271971 FAM110DQ8TAY7 271 aaPredicted RBP9.79□□□□□ -0.84
CAPN9-201ENST00000271971 ORAOV1Q8WV07 137 aa9.79□□□□□ -0.84
CAPN9-201ENST00000271971 ZNF355PQ9NSJ1 428 aa9.79□□□□□ -0.84
CAPN9-201ENST00000271971 A0A1W2PPV4 95 aa9.79□□□□□ -0.84
CAPN9-201ENST00000271971 CCL25O15444 150 aa9.79□□□□□ -0.84
CAPN9-201ENST00000271971 TMEM95Q3KNT9 176 aa9.79□□□□□ -0.84
CAPN9-201ENST00000271971 OR1L6Q8NGR2 347 aa9.79□□□□□ -0.84
CAPN9-201ENST00000271971 DUX5Q96PT3 197 aa9.79□□□□□ -0.84
CAPN9-201ENST00000271971 GRIFINA4D1Z8 144 aa9.78□□□□□ -0.84
CAPN9-201ENST00000271971 HOXA3O43365 443 aaPredicted RBP9.78□□□□□ -0.84
CAPN9-201ENST00000271971 IGLC1P0CG04 106 aa9.78□□□□□ -0.84
CAPN9-201ENST00000271971 TIGITQ495A1 244 aa9.78□□□□□ -0.84
CAPN9-201ENST00000271971 COX19Q49B96 90 aa9.78□□□□□ -0.84
CAPN9-201ENST00000271971 Q6YL49 198 aa9.78□□□□□ -0.84
CAPN9-201ENST00000271971 STPG4Q8N801 248 aa9.78□□□□□ -0.84
CAPN9-201ENST00000271971 Q8N976 141 aa9.78□□□□□ -0.84
CAPN9-201ENST00000271971 MRPL18Q9H0U6 180 aaKnown RBP9.78□□□□□ -0.84
CAPN9-201ENST00000271971 NF1P21359 2839 aa9.78□□□□□ -0.84
CAPN9-201ENST00000271971 TRAV41A0A0B4J266 112 aa9.78□□□□□ -0.84
CAPN9-201ENST00000271971 ATP5G3P48201 142 aa9.78□□□□□ -0.84
CAPN9-201ENST00000271971 MIR17HGQ75NE6 70 aa9.78□□□□□ -0.84
CAPN9-201ENST00000271971 ZNF586Q9NXT0 402 aa9.78□□□□□ -0.84
CAPN9-201ENST00000271971 UQCR10Q9UDW1 63 aa9.78□□□□□ -0.84
CAPN9-201ENST00000271971 FBXL7Q9UJT9 491 aa9.78□□□□□ -0.84
CAPN9-201ENST00000271971 RNF114Q9Y508 228 aa9.78□□□□□ -0.84
CAPN9-201ENST00000271971 PSMB11A5LHX3 300 aa9.77□□□□□ -0.85
CAPN9-201ENST00000271971 F8W735 103 aaPredicted RBP9.77□□□□□ -0.85
CAPN9-201ENST00000271971 ARL14EPLP0DKL9 152 aa9.77□□□□□ -0.85
CAPN9-201ENST00000271971 MORN5Q5VZ52 161 aa9.77□□□□□ -0.85
CAPN9-201ENST00000271971 VN1R17PQ8TDU5 208 aa9.77□□□□□ -0.85
CAPN9-201ENST00000271971 UHRF2Q96PU4 802 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms