RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SLIRPQ9GZT3 109 aaKnown RBP6.28□□□□□ -1.4
TPM3-201ENST00000271850 DOK5Q9P104 306 aa6.28□□□□□ -1.4
TPM3-201ENST00000271850 FAT1Q14517 4588 aa6.27□□□□□ -1.41
TPM3-201ENST00000271850 HERC1Q15751 4861 aa6.27□□□□□ -1.41
TPM3-201ENST00000271850 ZNF98A6NK75 572 aa6.27□□□□□ -1.41
TPM3-201ENST00000271850 ZNF705GA8MUZ8 300 aaPredicted RBP6.27□□□□□ -1.41
TPM3-201ENST00000271850 ID1P41134 155 aa6.27□□□□□ -1.41
TPM3-201ENST00000271850 CNN1P51911 297 aaKnown RBP6.27□□□□□ -1.41
TPM3-201ENST00000271850 SPINK13Q1W4C9 94 aa6.27□□□□□ -1.41
TPM3-201ENST00000271850 NOXA1Q86UR1 476 aa6.27□□□□□ -1.41
TPM3-201ENST00000271850 UBE2DNLQ8IWF7 75 aa6.27□□□□□ -1.41
TPM3-201ENST00000271850 BAP18Q8IXM2 172 aa6.27□□□□□ -1.41
TPM3-201ENST00000271850 OR8I2Q8N0Y5 310 aa6.27□□□□□ -1.41
TPM3-201ENST00000271850 CENPSQ8N2Z9 138 aa6.27□□□□□ -1.41
TPM3-201ENST00000271850 ZNRF2Q8NHG8 242 aa6.27□□□□□ -1.41
TPM3-201ENST00000271850 COQ8AQ8NI60 647 aa6.27□□□□□ -1.41
TPM3-201ENST00000271850 IGF2BP2-AS1Q96M15 143 aa6.27□□□□□ -1.41
TPM3-201ENST00000271850 CCDC59Q9P031 241 aaKnown RBP6.27□□□□□ -1.41
TPM3-201ENST00000271850 TRAV12-2A0A075B6T6 113 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 PMS2P5A8MQ11 134 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 SNRPGP15A8MWD9 76 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 H3BRN7 92 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 IFNA21P01568 189 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 HBE1P02100 147 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 NUP62P37198 522 aaPredicted RBP6.26□□□□□ -1.41
TPM3-201ENST00000271850 DAD1P61803 113 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 RRN3P1Q2M238 152 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 C1orf134Q5TEV5 83 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 SPATA31B1PQ5VZV4 182 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 LRTM2Q8N967 370 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 OR1S1Q8NH92 325 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 C16orf92Q96LL3 132 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 RSG1Q9BU20 258 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 KRTAP1-5Q9BYS1 174 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 MAGT1Q9H0U3 335 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 SLC25A22Q9H936 323 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 MCUBQ9NWR8 336 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 KCNIP3Q9Y2W7 256 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 GOLT1BQ9Y3E0 138 aa6.26□□□□□ -1.41
TPM3-201ENST00000271850 TEX48A0A1B0GUV7 120 aa6.25□□□□□ -1.41
TPM3-201ENST00000271850 H3BP45 60 aa6.25□□□□□ -1.41
TPM3-201ENST00000271850 MRPS12O15235 138 aaKnown RBP6.25□□□□□ -1.41
TPM3-201ENST00000271850 CCNKO75909 580 aa6.25□□□□□ -1.41
TPM3-201ENST00000271850 TNFSF8P32971 234 aa6.25□□□□□ -1.41
TPM3-201ENST00000271850 ATP5IP56385 69 aaPredicted RBP6.25□□□□□ -1.41
TPM3-201ENST00000271850 PPP1R1AQ13522 171 aa6.25□□□□□ -1.41
TPM3-201ENST00000271850 KIR3DS1Q14943 382 aa6.25□□□□□ -1.41
TPM3-201ENST00000271850 EBLN2Q6P2I7 272 aa6.25□□□□□ -1.41
TPM3-201ENST00000271850 ACOT7LQ6ZUV0 252 aa6.25□□□□□ -1.41
TPM3-201ENST00000271850 GPR141Q7Z602 305 aa6.25□□□□□ -1.41
TPM3-201ENST00000271850 C7orf50Q9BRJ6 194 aaKnown RBP6.25□□□□□ -1.41
TPM3-201ENST00000271850 MRPS26Q9BYN8 205 aaKnown RBP6.25□□□□□ -1.41
TPM3-201ENST00000271850 RPRMQ9NS64 109 aa6.25□□□□□ -1.41
TPM3-201ENST00000271850 CACFD1Q9UGQ2 172 aa6.25□□□□□ -1.41
TPM3-201ENST00000271850 SCP2D1Q9UJQ7 156 aa6.25□□□□□ -1.41
TPM3-201ENST00000271850 SLC45A2Q9UMX9 530 aa6.25□□□□□ -1.41
TPM3-201ENST00000271850 LINC00588Q9Y4M8 146 aa6.25□□□□□ -1.41
TPM3-201ENST00000271850 V9GYH0 126 aa6.25□□□□□ -1.41
TPM3-201ENST00000271850 NBDYA0A0U1RRE5 68 aa6.24□□□□□ -1.41
TPM3-201ENST00000271850 DUXBA0A1W2PPF3 345 aa6.24□□□□□ -1.41
TPM3-201ENST00000271850 H3BMQ9 156 aa6.24□□□□□ -1.41
TPM3-201ENST00000271850 SLC25A6P12236 298 aa6.24□□□□□ -1.41
TPM3-201ENST00000271850 ORM2P19652 201 aa6.24□□□□□ -1.41
TPM3-201ENST00000271850 TMEM128Q5BJH2 165 aa6.24□□□□□ -1.41
TPM3-201ENST00000271850 PATE2Q6UY27 113 aa6.24□□□□□ -1.41
TPM3-201ENST00000271850 TMED4Q7Z7H5 227 aa6.24□□□□□ -1.41
TPM3-201ENST00000271850 RNF141Q8WVD5 230 aa6.24□□□□□ -1.41
TPM3-201ENST00000271850 PPP1R14BQ96C90 147 aa6.24□□□□□ -1.41
TPM3-201ENST00000271850 SLC25A39Q9BZJ4 359 aaPredicted RBP6.24□□□□□ -1.41
TPM3-201ENST00000271850 PAIP2BQ9ULR5 123 aaKnown RBP6.24□□□□□ -1.41
TPM3-201ENST00000271850 LYRM9A8MSI8 78 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 WRBO00258 174 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 SYNGR2O43760 224 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 SFT2D2O95562 160 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 INSP01308 110 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 DEFB130BP0DP73 79 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 DEFB130AP0DP74 79 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 CXCL3P19876 107 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 TSPOP30536 169 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 GALR1P47211 349 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 MEOX2P50222 304 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 SRPXP78539 464 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 GGNBP1Q5YKI7 109 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 ZBTB8BQ8NAP8 495 aaPredicted RBP6.23□□□□□ -1.41
TPM3-201ENST00000271850 OR4D5Q8NGN0 318 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 OR1B1Q8NGR6 318 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 RAB2BQ8WUD1 216 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 UHRF2Q96PU4 802 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 SHANK2-AS3Q9BTD1 123 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 PARD6GQ9BYG4 376 aaPredicted RBP6.23□□□□□ -1.41
TPM3-201ENST00000271850 RSL24D1Q9UHA3 163 aaKnown RBP6.23□□□□□ -1.41
TPM3-201ENST00000271850 RABL2BQ9UNT1 228 aa6.23□□□□□ -1.41
TPM3-201ENST00000271850 A0A087X0K7 114 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 FABP12A6NFH5 140 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 C16orf90A8MZG2 172 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 BOLA2-SMG1P6H3BVE0 249 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 ADAP1O75689 374 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 CDK2AP2O75956 126 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 HOXB5P09067 269 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 ANXA3P12429 323 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms