RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 FAM74A3Q4VXF1 159 aa18.96■□□□□ 0.63
SSBP4-201ENST00000270061 C1QL4Q86Z23 238 aa18.96■□□□□ 0.63
SSBP4-201ENST00000270061 FAM223AQ8IWN6 122 aa18.96■□□□□ 0.63
SSBP4-201ENST00000270061 Q8WTZ3 238 aa18.96■□□□□ 0.63
SSBP4-201ENST00000270061 OR51M1Q9H341 326 aa18.96■□□□□ 0.63
SSBP4-201ENST00000270061 CTSGP08311 255 aa18.96■□□□□ 0.63
SSBP4-201ENST00000270061 PAXXQ9BUH6 204 aa18.96■□□□□ 0.63
SSBP4-201ENST00000270061 PUS1Q9Y606 427 aaKnown RBP eCLIP18.96■□□□□ 0.63
SSBP4-201ENST00000270061 TRBV7-1A0A0A6YYK4 115 aa18.95■□□□□ 0.62
SSBP4-201ENST00000270061 A0A1W2PRE2 83 aa18.94■□□□□ 0.62
SSBP4-201ENST00000270061 EEF1AKMT3Q96AZ1 226 aa18.94■□□□□ 0.62
SSBP4-201ENST00000270061 RNF125Q96EQ8 232 aa18.94■□□□□ 0.62
SSBP4-201ENST00000270061 TVP23CQ96ET8 276 aa18.94■□□□□ 0.62
SSBP4-201ENST00000270061 OR2T8A6NH00 312 aa18.93■□□□□ 0.62
SSBP4-201ENST00000270061 DNASE2O00115 360 aaPredicted RBP18.93■□□□□ 0.62
SSBP4-201ENST00000270061 IGHV3-23P01764 117 aa18.93■□□□□ 0.62
SSBP4-201ENST00000270061 RHEBQ15382 184 aa18.93■□□□□ 0.62
SSBP4-201ENST00000270061 SLC25A39Q9BZJ4 359 aaPredicted RBP18.93■□□□□ 0.62
SSBP4-201ENST00000270061 ZNF727A8MUV8 499 aa18.93■□□□□ 0.62
SSBP4-201ENST00000270061 G3V4G9 280 aa18.93■□□□□ 0.62
SSBP4-201ENST00000270061 M0R036 132 aa18.93■□□□□ 0.62
SSBP4-201ENST00000270061 NUPL2O15504 423 aaKnown RBP18.93■□□□□ 0.62
SSBP4-201ENST00000270061 OR10J4P0C629 311 aa18.93■□□□□ 0.62
SSBP4-201ENST00000270061 NPPCP23582 126 aa18.93■□□□□ 0.62
SSBP4-201ENST00000270061 UBE2L3P68036 154 aaKnown RBP18.93■□□□□ 0.62
SSBP4-201ENST00000270061 ATP5G2Q06055 141 aa18.93■□□□□ 0.62
SSBP4-201ENST00000270061 S100A7AQ86SG5 101 aa18.93■□□□□ 0.62
SSBP4-201ENST00000270061 FXYD5Q96DB9 178 aa18.93■□□□□ 0.62
SSBP4-201ENST00000270061 MS4A10Q96PG2 267 aa18.93■□□□□ 0.62
SSBP4-201ENST00000270061 PF4P02776 101 aa18.92■□□□□ 0.62
SSBP4-201ENST00000270061 IL4P05112 153 aa18.92■□□□□ 0.62
SSBP4-201ENST00000270061 ADMP35318 185 aa18.92■□□□□ 0.62
SSBP4-201ENST00000270061 PNRC1Q12796 327 aaPredicted RBP18.92■□□□□ 0.62
SSBP4-201ENST00000270061 TEX38Q6PEX7 206 aa18.92■□□□□ 0.62
SSBP4-201ENST00000270061 PARLQ9H300 379 aa18.92■□□□□ 0.62
SSBP4-201ENST00000270061 PRKDCP78527 4128 aaKnown RBP18.91■□□□□ 0.62
SSBP4-201ENST00000270061 C7orf77A4D0Y5 90 aa18.91■□□□□ 0.62
SSBP4-201ENST00000270061 CFHR3Q02985 330 aa18.91■□□□□ 0.62
SSBP4-201ENST00000270061 KIAA0141Q14154 515 aaPredicted RBP18.91■□□□□ 0.62
SSBP4-201ENST00000270061 CCDC140Q96MF4 163 aa18.91■□□□□ 0.62
SSBP4-201ENST00000270061 SMIM7Q9BQ49 75 aa18.91■□□□□ 0.62
SSBP4-201ENST00000270061 SHANK2-AS3Q9BTD1 123 aa18.91■□□□□ 0.62
SSBP4-201ENST00000270061 TMEM14CQ9P0S9 112 aa18.91■□□□□ 0.62
SSBP4-201ENST00000270061 TGP01266 2768 aa18.91■□□□□ 0.62
SSBP4-201ENST00000270061 PYYP10082 97 aa18.91■□□□□ 0.62
SSBP4-201ENST00000270061 SAMD5Q5TGI4 173 aa18.91■□□□□ 0.62
SSBP4-201ENST00000270061 C11orf52Q96A22 123 aa18.91■□□□□ 0.62
SSBP4-201ENST00000270061 CHRDL1Q9BU40 450 aa18.91■□□□□ 0.62
SSBP4-201ENST00000270061 SDF2L1Q9HCN8 221 aa18.91■□□□□ 0.62
SSBP4-201ENST00000270061 H3BRN7 92 aa18.9■□□□□ 0.62
SSBP4-201ENST00000270061 IGLV1-40P01703 118 aa18.9■□□□□ 0.62
SSBP4-201ENST00000270061 TRGV3P03979 118 aa18.9■□□□□ 0.62
SSBP4-201ENST00000270061 CLEC3BP05452 202 aa18.9■□□□□ 0.62
SSBP4-201ENST00000270061 CD33P20138 364 aa18.9■□□□□ 0.62
SSBP4-201ENST00000270061 ZNF343Q6P1L6 599 aa18.9■□□□□ 0.62
SSBP4-201ENST00000270061 ZNF600Q6ZNG1 722 aa18.9■□□□□ 0.62
SSBP4-201ENST00000270061 RPUSD4Q96CM3 377 aaKnown RBP18.9■□□□□ 0.62
SSBP4-201ENST00000270061 USMG5Q96IX5 58 aa18.9■□□□□ 0.62
SSBP4-201ENST00000270061 NAT8Q9UHE5 227 aa18.9■□□□□ 0.62
SSBP4-201ENST00000270061 GP9P14770 177 aa18.89■□□□□ 0.61
SSBP4-201ENST00000270061 GPR183P32249 361 aa18.89■□□□□ 0.61
SSBP4-201ENST00000270061 C20orf24Q9BUV8 137 aa18.89■□□□□ 0.61
SSBP4-201ENST00000270061 USF2Q15853 346 aaPredicted RBP18.88■□□□□ 0.61
SSBP4-201ENST00000270061 TMEM241Q24JQ0 296 aa18.88■□□□□ 0.61
SSBP4-201ENST00000270061 RPS10P5Q9NQ39 176 aa18.88■□□□□ 0.61
SSBP4-201ENST00000270061 B4DEV8 164 aa18.88■□□□□ 0.61
SSBP4-201ENST00000270061 BEAN1Q3B7T3 259 aa18.88■□□□□ 0.61
SSBP4-201ENST00000270061 OXLD1Q5BKU9 147 aa18.88■□□□□ 0.61
SSBP4-201ENST00000270061 WFDC9Q8NEX5 89 aa18.88■□□□□ 0.61
SSBP4-201ENST00000270061 ZNF414Q96IQ9 312 aa18.88■□□□□ 0.61
SSBP4-201ENST00000270061 TGOLN2O43493 480 aa18.87■□□□□ 0.61
SSBP4-201ENST00000270061 NDUFB4O95168 129 aa18.87■□□□□ 0.61
SSBP4-201ENST00000270061 ZNF674Q2M3X9 581 aa18.87■□□□□ 0.61
SSBP4-201ENST00000270061 CLEC19AQ6UXS0 136 aa18.87■□□□□ 0.61
SSBP4-201ENST00000270061 GGTLC3B5MD39 225 aa18.86■□□□□ 0.61
SSBP4-201ENST00000270061 NBEAP1P0C6P0 100 aa18.86■□□□□ 0.61
SSBP4-201ENST00000270061 TPPP2P59282 170 aa18.86■□□□□ 0.61
SSBP4-201ENST00000270061 FOXE3Q13461 319 aa18.86■□□□□ 0.61
SSBP4-201ENST00000270061 KLHL30-AS1Q8NEE0 82 aa18.86■□□□□ 0.61
SSBP4-201ENST00000270061 RNF24Q9Y225 148 aa18.86■□□□□ 0.61
SSBP4-201ENST00000270061 SCO2A0A1W2PP80 73 aa18.86■□□□□ 0.61
SSBP4-201ENST00000270061 S100A7P31151 101 aa18.86■□□□□ 0.61
SSBP4-201ENST00000270061 SMCO4Q9NRQ5 59 aa18.86■□□□□ 0.61
SSBP4-201ENST00000270061 A0A087WWC5 75 aa18.85■□□□□ 0.61
SSBP4-201ENST00000270061 RPLP1P05386 114 aaKnown RBP18.85■□□□□ 0.61
SSBP4-201ENST00000270061 ELANEP08246 267 aa18.85■□□□□ 0.61
SSBP4-201ENST00000270061 SUMO1P63165 101 aaKnown RBP18.85■□□□□ 0.61
SSBP4-201ENST00000270061 KPRPQ5T749 579 aaPredicted RBP18.85■□□□□ 0.61
SSBP4-201ENST00000270061 LEMD1Q68G75 181 aa18.85■□□□□ 0.61
SSBP4-201ENST00000270061 TMEM88Q6PEY1 159 aa18.85■□□□□ 0.61
SSBP4-201ENST00000270061 C18orf65Q6ZTR6 163 aa18.85■□□□□ 0.61
SSBP4-201ENST00000270061 C8orf86Q6ZUL3 223 aa18.85■□□□□ 0.61
SSBP4-201ENST00000270061 ZNF98A6NK75 572 aa18.84■□□□□ 0.61
SSBP4-201ENST00000270061 IGHG4P01861 327 aa18.84■□□□□ 0.61
SSBP4-201ENST00000270061 HIST1H1EP10412 219 aaKnown RBP18.84■□□□□ 0.61
SSBP4-201ENST00000270061 MYCNOSP40205 109 aa18.84■□□□□ 0.61
SSBP4-201ENST00000270061 LCNL1Q6ZST4 164 aa18.84■□□□□ 0.61
SSBP4-201ENST00000270061 BPIFA4PQ86YQ2 179 aa18.84■□□□□ 0.61
SSBP4-201ENST00000270061 CBLN2Q8IUK8 224 aa18.84■□□□□ 0.61
SSBP4-201ENST00000270061 TCEAL7Q9BRU2 100 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms