RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 IGFL4Q6B9Z1 124 aa11.07□□□□□ -0.64
NPC1-201ENST00000269228 SYNJ2BPP57105 145 aa11.07□□□□□ -0.64
NPC1-201ENST00000269228 DIAPH2-AS1Q14236 149 aa11.07□□□□□ -0.64
NPC1-201ENST00000269228 SEM1Q6ZVN7 128 aa11.07□□□□□ -0.64
NPC1-201ENST00000269228 RHPN1-AS1Q9BWJ2 59 aa11.07□□□□□ -0.64
NPC1-201ENST00000269228 KAAG1Q9UBP8 84 aa11.07□□□□□ -0.64
NPC1-201ENST00000269228 GOLGB1Q14789 3259 aaKnown RBP11.07□□□□□ -0.64
NPC1-201ENST00000269228 C22orf46C9J442 243 aa11.06□□□□□ -0.64
NPC1-201ENST00000269228 SPRNQ5BIV9 151 aa11.06□□□□□ -0.64
NPC1-201ENST00000269228 SSBP4Q9BWG4 385 aaPredicted RBP11.06□□□□□ -0.64
NPC1-201ENST00000269228 ANAPC10Q9UM13 185 aa11.06□□□□□ -0.64
NPC1-201ENST00000269228 A0A087WWC5 75 aa11.06□□□□□ -0.64
NPC1-201ENST00000269228 NDUFS6O75380 124 aaKnown RBP11.06□□□□□ -0.64
NPC1-201ENST00000269228 IL17RELQ6ZVW7 336 aa11.06□□□□□ -0.64
NPC1-201ENST00000269228 C11orf53Q8IXP5 236 aa11.06□□□□□ -0.64
NPC1-201ENST00000269228 OSTCQ9NRP0 149 aa11.06□□□□□ -0.64
NPC1-201ENST00000269228 A0A1B0GW15 77 aa11.06□□□□□ -0.64
NPC1-201ENST00000269228 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.06□□□□□ -0.64
NPC1-201ENST00000269228 CA1P00915 261 aaPredicted RBP11.06□□□□□ -0.64
NPC1-201ENST00000269228 PMCHL1Q16048 86 aa11.06□□□□□ -0.64
NPC1-201ENST00000269228 ORMDL3Q8N138 153 aa11.06□□□□□ -0.64
NPC1-201ENST00000269228 SRSF8Q9BRL6 282 aaKnown RBP11.06□□□□□ -0.64
NPC1-201ENST00000269228 CTSZQ9UBR2 303 aa11.06□□□□□ -0.64
NPC1-201ENST00000269228 FCN3O75636 299 aa11.05□□□□□ -0.64
NPC1-201ENST00000269228 ATOH7Q8N100 152 aa11.05□□□□□ -0.64
NPC1-201ENST00000269228 LINC00311Q8N616 119 aa11.05□□□□□ -0.64
NPC1-201ENST00000269228 C3orf56Q8N813 242 aa11.05□□□□□ -0.64
NPC1-201ENST00000269228 PRSS2P07478 247 aa11.05□□□□□ -0.64
NPC1-201ENST00000269228 SPATA45Q537H7 98 aa11.05□□□□□ -0.64
NPC1-201ENST00000269228 TMEM183AQ8IXX5 376 aa11.05□□□□□ -0.64
NPC1-201ENST00000269228 TMEM14BQ9NUH8 114 aa11.05□□□□□ -0.64
NPC1-201ENST00000269228 NDUFB8O95169 186 aa11.05□□□□□ -0.64
NPC1-201ENST00000269228 TOMM40O96008 361 aa11.05□□□□□ -0.64
NPC1-201ENST00000269228 TDGF1P3P51864 188 aa11.05□□□□□ -0.64
NPC1-201ENST00000269228 SUMO2P61956 95 aaKnown RBP11.05□□□□□ -0.64
NPC1-201ENST00000269228 TCF23Q7RTU1 214 aa11.05□□□□□ -0.64
NPC1-201ENST00000269228 C9orf139Q6ZV77 190 aa11.05□□□□□ -0.64
NPC1-201ENST00000269228 FAM110DQ8TAY7 271 aaPredicted RBP11.05□□□□□ -0.64
NPC1-201ENST00000269228 TMEM101Q96IK0 257 aa11.05□□□□□ -0.64
NPC1-201ENST00000269228 ATRXP46100 2492 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 A6NDN8 102 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 TCRAP04437 139 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 LGALS3P17931 250 aaKnown RBP11.04□□□□□ -0.64
NPC1-201ENST00000269228 NDUFA4L2Q9NRX3 87 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 J3QLI3 93 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 IGHV2-70P01814 119 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 SRSF4Q08170 494 aaKnown RBP11.04□□□□□ -0.64
NPC1-201ENST00000269228 ACTL10Q5JWF8 245 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 RNF114Q9Y508 228 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 TRAV1-1A0A0B4J248 108 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 TMEM50AO95807 157 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 GCSHP23434 173 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 Q8NA96 180 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 DERL1Q9BUN8 251 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 DAZ1Q9NQZ3 744 aaKnown RBP11.04□□□□□ -0.64
NPC1-201ENST00000269228 TPSG1Q9NRR2 321 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 TRAV9-1A0A075B6T8 112 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 IGKV1-39P01597 117 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 IGHV2-5P01817 119 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 IGKV1D-39P04432 117 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 CD5P06127 495 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 Q8TAT8 98 aa11.04□□□□□ -0.64
NPC1-201ENST00000269228 H3BVH4 76 aa11.03□□□□□ -0.64
NPC1-201ENST00000269228 C1QL4Q86Z23 238 aa11.03□□□□□ -0.64
NPC1-201ENST00000269228 MTURNQ8N3F0 131 aa11.03□□□□□ -0.64
NPC1-201ENST00000269228 TRGV11A0A075B6L2 103 aa11.03□□□□□ -0.64
NPC1-201ENST00000269228 SRRM4A7MD48 611 aaKnown RBP11.03□□□□□ -0.64
NPC1-201ENST00000269228 GZMBP10144 247 aa11.03□□□□□ -0.64
NPC1-201ENST00000269228 RPL35AP18077 110 aaKnown RBP11.03□□□□□ -0.64
NPC1-201ENST00000269228 OR10J3Q5JRS4 329 aa11.03□□□□□ -0.64
NPC1-201ENST00000269228 TMEM170BQ5T4T1 132 aa11.03□□□□□ -0.64
NPC1-201ENST00000269228 SCGB3A1Q96QR1 104 aa11.03□□□□□ -0.64
NPC1-201ENST00000269228 FGF23Q9GZV9 251 aaPredicted RBP11.03□□□□□ -0.64
NPC1-201ENST00000269228 TMEM160Q9NX00 188 aa11.03□□□□□ -0.64
NPC1-201ENST00000269228 WIPF3A6NGB9 483 aa11.03□□□□□ -0.64
NPC1-201ENST00000269228 CMC4P56277 68 aaPredicted RBP11.03□□□□□ -0.64
NPC1-201ENST00000269228 FXYD7P58549 80 aa11.02□□□□□ -0.64
NPC1-201ENST00000269228 NUDT10Q8NFP7 164 aa11.02□□□□□ -0.64
NPC1-201ENST00000269228 NUDT11Q96G61 164 aa11.02□□□□□ -0.64
NPC1-201ENST00000269228 ZNF414Q96IQ9 312 aa11.02□□□□□ -0.64
NPC1-201ENST00000269228 TRGV4A0A0C4DH28 118 aa11.02□□□□□ -0.65
NPC1-201ENST00000269228 MEIG1Q5JSS6 88 aa11.02□□□□□ -0.65
NPC1-201ENST00000269228 NRGNQ92686 78 aa11.02□□□□□ -0.65
NPC1-201ENST00000269228 TMEM70Q9BUB7 260 aa11.02□□□□□ -0.65
NPC1-201ENST00000269228 DENND4AQ7Z401 1863 aa11.02□□□□□ -0.65
NPC1-201ENST00000269228 ZNF138P52744 262 aa11.02□□□□□ -0.65
NPC1-201ENST00000269228 LCN12Q6JVE5 192 aa11.02□□□□□ -0.65
NPC1-201ENST00000269228 TRAV8-1A0A0A6YYK1 113 aa11.02□□□□□ -0.65
NPC1-201ENST00000269228 H7C2G1 150 aa11.02□□□□□ -0.65
NPC1-201ENST00000269228 C1orf122Q6ZSJ8 110 aa11.02□□□□□ -0.65
NPC1-201ENST00000269228 PIEZO2Q9H5I5 2752 aa11.01□□□□□ -0.65
NPC1-201ENST00000269228 LYL1P12980 280 aa11.01□□□□□ -0.65
NPC1-201ENST00000269228 CTAG1AP78358 180 aa11.01□□□□□ -0.65
NPC1-201ENST00000269228 DEFB121Q5J5C9 76 aa11.01□□□□□ -0.65
NPC1-201ENST00000269228 FAM19A2Q8N3H0 131 aa11.01□□□□□ -0.65
NPC1-201ENST00000269228 DPH3Q96FX2 82 aa11.01□□□□□ -0.65
NPC1-201ENST00000269228 IGHV4-61A0A0C4DH41 118 aa11.01□□□□□ -0.65
NPC1-201ENST00000269228 OR11H12B2RN74 326 aa11.01□□□□□ -0.65
NPC1-201ENST00000269228 FAM120AOSQ5T036 256 aa11.01□□□□□ -0.65
NPC1-201ENST00000269228 RAB37Q96AX2 223 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms