RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 K7EP13 123 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 MPZP25189 248 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 GAGE5Q13069 117 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 GAGE6Q13070 117 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 CD300EQ496F6 205 aaPredicted RBP6.42□□□□□ -1.38
USP3-201ENST00000268049 SMIM20Q8N5G0 67 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 MRPL20Q9BYC9 149 aaKnown RBP6.42□□□□□ -1.38
USP3-201ENST00000268049 PGPEP1Q9NXJ5 209 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 GAGE12HA6NDE8 117 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 GAGE12JA6NER3 117 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 HIGD1CA8MV81 97 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 H3BRM9 83 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 GAGE7O76087 117 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 CLPSP04118 112 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 GAGE12FP0CL80 117 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 GAGE12GP0CL81 117 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 GAGE12IP0CL82 117 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 GAGE4Q13068 117 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 TMEM190Q8WZ59 177 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 COL4A3Q01955 1670 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 DENND4CQ5VZ89 1909 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 A0A1W2PRE2 83 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 C3orf79P0CE67 100 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 IGHV1-8P0DP01 117 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 IFITM1P13164 125 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 LOXL1Q08397 574 aaPredicted RBP6.42□□□□□ -1.38
USP3-201ENST00000268049 RNASEH2CQ8TDP1 164 aaKnown RBP6.42□□□□□ -1.38
USP3-201ENST00000268049 UTRNP46939 3433 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 FAM231BA6NCW3 169 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 IGHV3-23P01764 117 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 SUMO2P61956 95 aaKnown RBP6.41□□□□□ -1.38
USP3-201ENST00000268049 HIST1H4AP62805 103 aaKnown RBP6.41□□□□□ -1.38
USP3-201ENST00000268049 CHCHD5Q9BSY4 110 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 CCL3L1P16619 93 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 UCP1P25874 307 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 GUSBP1Q15486 140 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 Q6AWC8 147 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 GOLT1AQ6ZVE7 132 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 C1QL2Q7Z5L3 287 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 NXT2Q9NPJ8 142 aaKnown RBP6.41□□□□□ -1.38
USP3-201ENST00000268049 ERG28Q9UKR5 140 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 LHFPL6Q9Y693 200 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 PLXNA2O75051 1894 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 B5MCH6 92 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 MLNRO43193 412 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 GATAD1Q8WUU5 269 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 A0A0G2JK05 382 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 A0A1B0GW64 132 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 hDV102S1A0JD36 115 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 CGAP01215 116 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 IGKCP01834 107 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 GGNQ86UU5 652 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 LEAP2Q969E1 77 aa6.41□□□□□ -1.38
USP3-201ENST00000268049 MBNL3Q9NUK0 354 aaKnown RBP6.41□□□□□ -1.38
USP3-201ENST00000268049 CCL20P78556 96 aa6.4□□□□□ -1.38
USP3-201ENST00000268049 GPHA2Q96T91 129 aa6.4□□□□□ -1.38
USP3-201ENST00000268049 OSTCQ9NRP0 149 aa6.4□□□□□ -1.38
USP3-201ENST00000268049 SPANXCQ9NY87 97 aa6.4□□□□□ -1.38
USP3-201ENST00000268049 TRBV7-9A0A0J9YWB2 115 aa6.4□□□□□ -1.38
USP3-201ENST00000268049 UPK2O00526 184 aa6.4□□□□□ -1.38
USP3-201ENST00000268049 PEX7O00628 323 aa6.4□□□□□ -1.38
USP3-201ENST00000268049 CSTL1Q9H114 145 aa6.4□□□□□ -1.38
USP3-201ENST00000268049 RNASE7Q9H1E1 156 aaKnown RBP6.4□□□□□ -1.38
USP3-201ENST00000268049 REG1AP05451 166 aa6.4□□□□□ -1.38
USP3-201ENST00000268049 SPATA31B1PQ5VZV4 182 aa6.4□□□□□ -1.38
USP3-201ENST00000268049 ZNF818PQ6ZRF7 136 aa6.4□□□□□ -1.38
USP3-201ENST00000268049 ZCCHC24Q8N2G6 241 aaKnown RBP6.4□□□□□ -1.38
USP3-201ENST00000268049 COQ2Q96H96 371 aa6.4□□□□□ -1.38
USP3-201ENST00000268049 SPANXDQ9BXN6 97 aa6.4□□□□□ -1.38
USP3-201ENST00000268049 RTTNQ86VV8 2226 aa6.4□□□□□ -1.39
USP3-201ENST00000268049 ADAMTS9Q9P2N4 1935 aa6.4□□□□□ -1.39
USP3-201ENST00000268049 YPEL1O60688 119 aa6.4□□□□□ -1.39
USP3-201ENST00000268049 KLRD1Q13241 179 aa6.4□□□□□ -1.39
USP3-201ENST00000268049 RUSC1-AS1Q66K80 236 aa6.4□□□□□ -1.39
USP3-201ENST00000268049 C2orf82Q6UX34 121 aa6.4□□□□□ -1.39
USP3-201ENST00000268049 C10orf105Q8TEF2 133 aa6.4□□□□□ -1.39
USP3-201ENST00000268049 YPEL2Q96QA6 119 aa6.4□□□□□ -1.39
USP3-201ENST00000268049 ADCYAP1P18509 176 aa6.4□□□□□ -1.39
USP3-201ENST00000268049 WDR82Q6UXN9 313 aa6.4□□□□□ -1.39
USP3-201ENST00000268049 LINC00114Q6XXX2 140 aa6.4□□□□□ -1.39
USP3-201ENST00000268049 SIGLEC15Q6ZMC9 328 aa6.4□□□□□ -1.39
USP3-201ENST00000268049 IFI27L1Q96BM0 104 aa6.4□□□□□ -1.39
USP3-201ENST00000268049 TM2D2Q9BX73 214 aa6.4□□□□□ -1.39
USP3-201ENST00000268049 KIF26BQ2KJY2 2108 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 OBSL1O75147 1896 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 INAFM1C9JVW0 142 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 H0YIZ8 118 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 GAS1P54826 345 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 RPL15P61313 204 aaKnown RBP6.39□□□□□ -1.39
USP3-201ENST00000268049 GAGE2AQ6NT46 116 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 NCOR2Q9Y618 2525 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 IGHV3-35A0A0C4DH35 117 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 A0A1W2PNU3 283 aaPredicted RBP6.39□□□□□ -1.39
USP3-201ENST00000268049 TMEM14DPA8MWL7 114 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 GP9P14770 177 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 RNASE4P34096 147 aaKnown RBP6.39□□□□□ -1.39
USP3-201ENST00000268049 FAM90A2PQ658T7 463 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 RTBDNQ9BSG5 229 aaPredicted RBP6.39□□□□□ -1.39
USP3-201ENST00000268049 TRACP01848 142 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 TFF3Q07654 80 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms