RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 HIST1H2BKO60814 126 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 TCRAP04437 139 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 HIST1H2BJP06899 126 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 HIST1H2BOP23527 126 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 HIST1H2BBP33778 126 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 HIST1H2BDP58876 126 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 HIST1H2BCP62807 126 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 HIST2H2BEQ16778 126 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.5□□□□□ -0.41
TIMP3-201ENST00000266085 LINC01356Q8N9X3 169 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 HIST1H2BHQ93079 126 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 HIST1H2BNQ99877 126 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 HIST1H2BMQ99879 126 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 DERL1Q9BUN8 251 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 DKK4Q9UBT3 224 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 PRDM13Q9H4Q3 707 aa12.49□□□□□ -0.41
TIMP3-201ENST00000266085 ABCA2Q9BZC7 2435 aa12.49□□□□□ -0.41
TIMP3-201ENST00000266085 TRBV7-1A0A0A6YYK4 115 aa12.49□□□□□ -0.41
TIMP3-201ENST00000266085 PPBPP02775 128 aa12.49□□□□□ -0.41
TIMP3-201ENST00000266085 ZNF562Q6V9R5 426 aa12.49□□□□□ -0.41
TIMP3-201ENST00000266085 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.49□□□□□ -0.41
TIMP3-201ENST00000266085 ADMP35318 185 aa12.49□□□□□ -0.41
TIMP3-201ENST00000266085 NUDT10Q8NFP7 164 aa12.49□□□□□ -0.41
TIMP3-201ENST00000266085 NUDT11Q96G61 164 aa12.49□□□□□ -0.41
TIMP3-201ENST00000266085 SRSF8Q9BRL6 282 aaKnown RBP12.49□□□□□ -0.41
TIMP3-201ENST00000266085 ZNF256Q9Y2P7 627 aaPredicted RBP12.49□□□□□ -0.41
TIMP3-201ENST00000266085 LEPP41159 167 aa12.49□□□□□ -0.41
TIMP3-201ENST00000266085 PSMG4Q5JS54 123 aa12.49□□□□□ -0.41
TIMP3-201ENST00000266085 MEIG1Q5JSS6 88 aa12.49□□□□□ -0.41
TIMP3-201ENST00000266085 GNB1LQ9BYB4 327 aa12.49□□□□□ -0.41
TIMP3-201ENST00000266085 FABP2P12104 132 aa12.48□□□□□ -0.41
TIMP3-201ENST00000266085 PARD6GQ9BYG4 376 aaPredicted RBP12.48□□□□□ -0.41
TIMP3-201ENST00000266085 NRN1Q9NPD7 142 aa12.48□□□□□ -0.41
TIMP3-201ENST00000266085 MYO9AB2RTY4 2548 aa12.48□□□□□ -0.41
TIMP3-201ENST00000266085 GAGE10A6NGK3 116 aa12.48□□□□□ -0.41
TIMP3-201ENST00000266085 TMEM262E9PQX1 116 aa12.48□□□□□ -0.41
TIMP3-201ENST00000266085 UBE2E1P51965 193 aa12.48□□□□□ -0.41
TIMP3-201ENST00000266085 USMG5Q96IX5 58 aa12.48□□□□□ -0.41
TIMP3-201ENST00000266085 PMCHL2Q9BQD1 86 aa12.48□□□□□ -0.41
TIMP3-201ENST00000266085 ADAMTS9Q9P2N4 1935 aa12.47□□□□□ -0.41
TIMP3-201ENST00000266085 RUSC1-AS1Q66K80 236 aa12.47□□□□□ -0.41
TIMP3-201ENST00000266085 FOXC2Q99958 501 aa12.47□□□□□ -0.41
TIMP3-201ENST00000266085 REG4Q9BYZ8 158 aa12.47□□□□□ -0.41
TIMP3-201ENST00000266085 IGKV2-40A0A087WW87 121 aaPredicted RBP12.47□□□□□ -0.41
TIMP3-201ENST00000266085 F2Z2F3 143 aa12.47□□□□□ -0.41
TIMP3-201ENST00000266085 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.47□□□□□ -0.41
TIMP3-201ENST00000266085 IGKV2D-40P01614 121 aaPredicted RBP12.47□□□□□ -0.41
TIMP3-201ENST00000266085 EMP1P54849 157 aa12.47□□□□□ -0.41
TIMP3-201ENST00000266085 C17orf58Q2M2W7 97 aa12.47□□□□□ -0.41
TIMP3-201ENST00000266085 TMEM14BQ9NUH8 114 aa12.47□□□□□ -0.41
TIMP3-201ENST00000266085 FOXL1Q12952 345 aa12.47□□□□□ -0.41
TIMP3-201ENST00000266085 C9orf139Q6ZV77 190 aa12.47□□□□□ -0.41
TIMP3-201ENST00000266085 MMP23AO75900 390 aa12.47□□□□□ -0.41
TIMP3-201ENST00000266085 TEX36Q5VZQ5 186 aa12.47□□□□□ -0.41
TIMP3-201ENST00000266085 OR5AN1Q8NGI8 311 aa12.47□□□□□ -0.41
TIMP3-201ENST00000266085 NSUN5P1Q3KNT7 163 aa12.46□□□□□ -0.41
TIMP3-201ENST00000266085 Q5PR19 223 aa12.46□□□□□ -0.41
TIMP3-201ENST00000266085 ATP5L2Q7Z4Y8 100 aa12.46□□□□□ -0.41
TIMP3-201ENST00000266085 C14orf144Q96I85 54 aa12.46□□□□□ -0.41
TIMP3-201ENST00000266085 JOSD1Q15040 202 aaPredicted RBP12.46□□□□□ -0.41
TIMP3-201ENST00000266085 OR10J3Q5JRS4 329 aa12.46□□□□□ -0.41
TIMP3-201ENST00000266085 TMEM101Q96IK0 257 aa12.46□□□□□ -0.41
TIMP3-201ENST00000266085 COLCA2A8K830 154 aa12.46□□□□□ -0.42
TIMP3-201ENST00000266085 NDUFS7O75251 213 aa12.46□□□□□ -0.42
TIMP3-201ENST00000266085 ZNF688P0C7X2 276 aa12.46□□□□□ -0.42
TIMP3-201ENST00000266085 NXT2Q9NPJ8 142 aaKnown RBP12.46□□□□□ -0.42
TIMP3-201ENST00000266085 LINC00614P0C842 121 aa12.45□□□□□ -0.42
TIMP3-201ENST00000266085 GATA3P23771 443 aa12.45□□□□□ -0.42
TIMP3-201ENST00000266085 K7ERU9 68 aa12.45□□□□□ -0.42
TIMP3-201ENST00000266085 CXCL1P09341 107 aa12.45□□□□□ -0.42
TIMP3-201ENST00000266085 WFDC12Q8WWY7 111 aa12.45□□□□□ -0.42
TIMP3-201ENST00000266085 COPS9Q8WXC6 57 aa12.45□□□□□ -0.42
TIMP3-201ENST00000266085 CACNG7P62955 275 aa12.45□□□□□ -0.42
TIMP3-201ENST00000266085 NDPQ00604 133 aa12.45□□□□□ -0.42
TIMP3-201ENST00000266085 HIVEP3Q5T1R4 2406 aa12.45□□□□□ -0.42
TIMP3-201ENST00000266085 TCF21O43680 179 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 LYPD1Q8N2G4 141 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 J3QKU1 62 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 TOMM40O96008 361 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 ZNF138P52744 262 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 CTAG1AP78358 180 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 ST20Q9HBF5 79 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 C15orf65H3BRN8 121 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 IGKV1-39P01597 117 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 IGKV1D-39P04432 117 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 CNTFRP26992 372 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 LY96Q9Y6Y9 160 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 TRAV8-1A0A0A6YYK1 113 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 WIPF3A6NGB9 483 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 GZMBP10144 247 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 ZNF833PQ6ZTB9 187 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 LINC00311Q8N616 119 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 NDUFA4L2Q9NRX3 87 aa12.44□□□□□ -0.42
TIMP3-201ENST00000266085 Q8NFD4 153 aa12.43□□□□□ -0.42
TIMP3-201ENST00000266085 HBDP02042 147 aa12.43□□□□□ -0.42
TIMP3-201ENST00000266085 PAX9P55771 341 aa12.43□□□□□ -0.42
TIMP3-201ENST00000266085 C2orf88Q9BSF0 95 aa12.43□□□□□ -0.42
TIMP3-201ENST00000266085 TRGV11A0A075B6L2 103 aa12.43□□□□□ -0.42
TIMP3-201ENST00000266085 FAM223BA6NKX1 122 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms