RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 IGLV2-8P01709 118 aa12.25□□□□□ -0.45
VPS26A-201ENST00000263559 CNN1P51911 297 aaKnown RBP12.25□□□□□ -0.45
VPS26A-201ENST00000263559 OR5I1Q13606 314 aa12.25□□□□□ -0.45
VPS26A-201ENST00000263559 OR5B12Q96R08 314 aa12.25□□□□□ -0.45
VPS26A-201ENST00000263559 TCEAL7Q9BRU2 100 aa12.25□□□□□ -0.45
VPS26A-201ENST00000263559 RABAC1Q9UI14 185 aa12.25□□□□□ -0.45
VPS26A-201ENST00000263559 CDC42EP3Q9UKI2 254 aa12.25□□□□□ -0.45
VPS26A-201ENST00000263559 TRBV19A0A075B6N1 114 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 C1orf196B1AJZ1 125 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 TPPP2P59282 170 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 TAS2R60P59551 318 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 Q6YL49 198 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 OR5R1Q8NH85 324 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 FAM210BQ96KR6 192 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 ZFAND3Q9H8U3 227 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 RPH3ALQ9UNE2 315 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 SMAD7O15105 426 aaKnown RBP12.24□□□□□ -0.45
VPS26A-201ENST00000263559 FLI1Q01543 452 aaPredicted RBP12.24□□□□□ -0.45
VPS26A-201ENST00000263559 EXOC3-AS1Q8N2X6 119 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 C5orf17Q8NAS9 161 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 TRBV24-1A0A075B6N3 115 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 BMPR1BO00238 502 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 ISLRO14498 428 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 PPP1R2P9O14990 202 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 OR10G8Q8NGN5 311 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 KLK15Q9H2R5 256 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 OTORQ9NRC9 128 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 RNF24Q9Y225 148 aa12.24□□□□□ -0.45
VPS26A-201ENST00000263559 PPP5D1E7EU14 171 aa12.23□□□□□ -0.45
VPS26A-201ENST00000263559 H3BUA1 57 aa12.23□□□□□ -0.45
VPS26A-201ENST00000263559 BRI3O95415 125 aa12.23□□□□□ -0.45
VPS26A-201ENST00000263559 S100PP25815 95 aa12.23□□□□□ -0.45
VPS26A-201ENST00000263559 RAB5BP61020 215 aa12.23□□□□□ -0.45
VPS26A-201ENST00000263559 TMEM95Q3KNT9 176 aa12.23□□□□□ -0.45
VPS26A-201ENST00000263559 MXRA5Q9NR99 2828 aa12.23□□□□□ -0.45
VPS26A-201ENST00000263559 NHLRC2Q8NBF2 726 aa12.23□□□□□ -0.45
VPS26A-201ENST00000263559 SGK494Q96LW2 274 aa12.23□□□□□ -0.45
VPS26A-201ENST00000263559 PF4V1P10720 104 aa12.22□□□□□ -0.45
VPS26A-201ENST00000263559 RPL15P61313 204 aaKnown RBP12.22□□□□□ -0.45
VPS26A-201ENST00000263559 ATP6V0BQ99437 205 aa12.22□□□□□ -0.45
VPS26A-201ENST00000263559 PYGO2Q9BRQ0 406 aa12.22□□□□□ -0.45
VPS26A-201ENST00000263559 ATG101Q9BSB4 218 aa12.22□□□□□ -0.45
VPS26A-201ENST00000263559 VPREB3Q9UKI3 123 aa12.22□□□□□ -0.45
VPS26A-201ENST00000263559 CCDC168Q8NDH2 2452 aa12.22□□□□□ -0.45
VPS26A-201ENST00000263559 SLC17A3O00476 420 aa12.22□□□□□ -0.45
VPS26A-201ENST00000263559 GCGP01275 180 aa12.22□□□□□ -0.45
VPS26A-201ENST00000263559 IGLV1-40P01703 118 aa12.22□□□□□ -0.45
VPS26A-201ENST00000263559 TCRAP04437 139 aa12.22□□□□□ -0.45
VPS26A-201ENST00000263559 SRP14P37108 136 aaKnown RBP12.22□□□□□ -0.45
VPS26A-201ENST00000263559 FAM3BP58499 235 aaPredicted RBP12.22□□□□□ -0.45
VPS26A-201ENST00000263559 CFHR3Q02985 330 aa12.22□□□□□ -0.45
VPS26A-201ENST00000263559 TMEM183BQ1AE95 376 aa12.22□□□□□ -0.45
VPS26A-201ENST00000263559 C1QL4Q86Z23 238 aa12.22□□□□□ -0.45
VPS26A-201ENST00000263559 KLF12Q9Y4X4 402 aa12.22□□□□□ -0.45
VPS26A-201ENST00000263559 HOXA3O43365 443 aaPredicted RBP12.21□□□□□ -0.45
VPS26A-201ENST00000263559 MGST1P10620 155 aaKnown RBP12.21□□□□□ -0.45
VPS26A-201ENST00000263559 ERVFC1-1P60608 527 aa12.21□□□□□ -0.45
VPS26A-201ENST00000263559 SIGLEC15Q6ZMC9 328 aa12.21□□□□□ -0.45
VPS26A-201ENST00000263559 LCNL1Q6ZST4 164 aa12.21□□□□□ -0.45
VPS26A-201ENST00000263559 BAGE2Q86Y30 109 aa12.21□□□□□ -0.45
VPS26A-201ENST00000263559 USMG5Q96IX5 58 aa12.21□□□□□ -0.45
VPS26A-201ENST00000263559 A0A1W2PPQ1 181 aa12.21□□□□□ -0.46
VPS26A-201ENST00000263559 CLPSL1A2RUU4 121 aa12.21□□□□□ -0.46
VPS26A-201ENST00000263559 UBE2G1P62253 170 aa12.21□□□□□ -0.46
VPS26A-201ENST00000263559 OR8I2Q8N0Y5 310 aa12.21□□□□□ -0.46
VPS26A-201ENST00000263559 PRDM13Q9H4Q3 707 aa12.21□□□□□ -0.46
VPS26A-201ENST00000263559 GCN1Q92616 2671 aaKnown RBP12.21□□□□□ -0.46
VPS26A-201ENST00000263559 ITPR2Q14571 2701 aa12.2□□□□□ -0.46
VPS26A-201ENST00000263559 RPL7P18124 248 aaKnown RBP12.2□□□□□ -0.46
VPS26A-201ENST00000263559 RELQ04864 619 aaPredicted RBP12.2□□□□□ -0.46
VPS26A-201ENST00000263559 RNASE7Q9H1E1 156 aaKnown RBP12.2□□□□□ -0.46
VPS26A-201ENST00000263559 TRBV12-3P01733 135 aa12.2□□□□□ -0.46
VPS26A-201ENST00000263559 IGHV3-11P01762 117 aa12.2□□□□□ -0.46
VPS26A-201ENST00000263559 ARL3P36405 182 aa12.2□□□□□ -0.46
VPS26A-201ENST00000263559 KCNIP4Q6PIL6 250 aa12.2□□□□□ -0.46
VPS26A-201ENST00000263559 IL17RELQ6ZVW7 336 aa12.2□□□□□ -0.46
VPS26A-201ENST00000263559 LYPD1Q8N2G4 141 aa12.2□□□□□ -0.46
VPS26A-201ENST00000263559 CMTM2Q8TAZ6 248 aa12.2□□□□□ -0.46
VPS26A-201ENST00000263559 IMMP2LQ96T52 175 aa12.2□□□□□ -0.46
VPS26A-201ENST00000263559 ZNF580Q9UK33 172 aa12.2□□□□□ -0.46
VPS26A-201ENST00000263559 SMAD5-AS1Q9Y6J3 95 aa12.2□□□□□ -0.46
VPS26A-201ENST00000263559 GGCTO75223 188 aaKnown RBP12.19□□□□□ -0.46
VPS26A-201ENST00000263559 RAB9AP51151 201 aa12.19□□□□□ -0.46
VPS26A-201ENST00000263559 BUB3O43684 328 aa12.19□□□□□ -0.46
VPS26A-201ENST00000263559 FOXL1Q12952 345 aa12.19□□□□□ -0.46
VPS26A-201ENST00000263559 V9GYV3 84 aa12.19□□□□□ -0.46
VPS26A-201ENST00000263559 TRGC2P03986 189 aa12.18□□□□□ -0.46
VPS26A-201ENST00000263559 S100A7P31151 101 aa12.18□□□□□ -0.46
VPS26A-201ENST00000263559 PDE6HQ13956 83 aa12.18□□□□□ -0.46
VPS26A-201ENST00000263559 FMC1Q96HJ9 113 aa12.18□□□□□ -0.46
VPS26A-201ENST00000263559 FOXC2Q99958 501 aa12.18□□□□□ -0.46
VPS26A-201ENST00000263559 ZNF207O43670 478 aaKnown RBP12.18□□□□□ -0.46
VPS26A-201ENST00000263559 APOHP02749 345 aaPredicted RBP12.18□□□□□ -0.46
VPS26A-201ENST00000263559 PRB4P10163 310 aaPredicted RBP12.18□□□□□ -0.46
VPS26A-201ENST00000263559 OSTCQ9NRP0 149 aa12.18□□□□□ -0.46
VPS26A-201ENST00000263559 FLNAP21333 2647 aaKnown RBP12.18□□□□□ -0.46
VPS26A-201ENST00000263559 TLN2Q9Y4G6 2542 aa12.17□□□□□ -0.46
VPS26A-201ENST00000263559 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.17□□□□□ -0.46
VPS26A-201ENST00000263559 IGHV3-66A0A0C4DH42 116 aa12.17□□□□□ -0.46
VPS26A-201ENST00000263559 GOLT1AQ6ZVE7 132 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 202.7 ms