RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 Q5PR19 223 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 DAZ1Q9NQZ3 744 aaKnown RBP13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 MORN3Q6PF18 240 aaPredicted RBP13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 RPP25LQ8N5L8 163 aaKnown RBP13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 LCN12Q6JVE5 192 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 RFNGQ9Y644 331 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 UBE2E1P51965 193 aa13.71□□□□□ -0.21
CROCCP3-201ENST00000263511 RNF144BQ7Z419 303 aa13.71□□□□□ -0.21
CROCCP3-201ENST00000263511 HIST3H2BBQ8N257 126 aa13.71□□□□□ -0.21
CROCCP3-201ENST00000263511 ASCL4Q6XD76 172 aa13.71□□□□□ -0.21
CROCCP3-201ENST00000263511 C5orf30Q96GV9 206 aa13.71□□□□□ -0.21
CROCCP3-201ENST00000263511 TMEM242Q9NWH2 141 aa13.71□□□□□ -0.21
CROCCP3-201ENST00000263511 TRAV2A0A0B4J234 112 aa13.71□□□□□ -0.21
CROCCP3-201ENST00000263511 ITGB1BP1O14713 200 aa13.71□□□□□ -0.21
CROCCP3-201ENST00000263511 TYMSP04818 313 aa13.71□□□□□ -0.21
CROCCP3-201ENST00000263511 THSD7BQ9C0I4 1608 aa13.71□□□□□ -0.22
CROCCP3-201ENST00000263511 A6NNC1 897 aa13.71□□□□□ -0.22
CROCCP3-201ENST00000263511 ZNF815PA8K554 130 aa13.71□□□□□ -0.22
CROCCP3-201ENST00000263511 C5orf24Q7Z6I8 188 aa13.71□□□□□ -0.22
CROCCP3-201ENST00000263511 TRAV9-2A0A087WT02 112 aa13.7□□□□□ -0.22
CROCCP3-201ENST00000263511 CKS1BP61024 79 aa13.7□□□□□ -0.22
CROCCP3-201ENST00000263511 SPOCK3Q9BQ16 436 aa13.7□□□□□ -0.22
CROCCP3-201ENST00000263511 SMPXQ9UHP9 88 aa13.7□□□□□ -0.22
CROCCP3-201ENST00000263511 IGHV3-73A0A0B4J1V6 119 aa13.7□□□□□ -0.22
CROCCP3-201ENST00000263511 NTF4P34130 210 aa13.7□□□□□ -0.22
CROCCP3-201ENST00000263511 LYZL1Q6UWQ5 148 aa13.7□□□□□ -0.22
CROCCP3-201ENST00000263511 DPH3P1Q9H4G8 78 aa13.7□□□□□ -0.22
CROCCP3-201ENST00000263511 OVOL3O00110 214 aa13.7□□□□□ -0.22
CROCCP3-201ENST00000263511 RNASE2P10153 161 aaKnown RBP13.7□□□□□ -0.22
CROCCP3-201ENST00000263511 PAX2Q02962 417 aa13.7□□□□□ -0.22
CROCCP3-201ENST00000263511 LINC00158P58513 81 aa13.69□□□□□ -0.22
CROCCP3-201ENST00000263511 PSG3Q16557 428 aa13.69□□□□□ -0.22
CROCCP3-201ENST00000263511 SLC25A2Q9BXI2 301 aa13.69□□□□□ -0.22
CROCCP3-201ENST00000263511 NHP2Q9NX24 153 aaKnown RBP13.69□□□□□ -0.22
CROCCP3-201ENST00000263511 CYTL1Q9NRR1 136 aa13.69□□□□□ -0.22
CROCCP3-201ENST00000263511 FXYD7P58549 80 aa13.69□□□□□ -0.22
CROCCP3-201ENST00000263511 FOXL1Q12952 345 aa13.69□□□□□ -0.22
CROCCP3-201ENST00000263511 CD300EQ496F6 205 aaPredicted RBP13.69□□□□□ -0.22
CROCCP3-201ENST00000263511 ZNF562Q6V9R5 426 aa13.69□□□□□ -0.22
CROCCP3-201ENST00000263511 SH2D1AO60880 128 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 OR5A1Q8NGJ0 315 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 Q8TAT8 98 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 NCR2O95944 276 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 SYNJ2BPP57105 145 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 UBE2E2Q96LR5 201 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 PI4KAP42356 2102 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 HEATR1Q9H583 2144 aaKnown RBP13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 C15orf62A8K5M9 175 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 IGHV3-53P01767 116 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 IGKV1-16P04430 117 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 TRBV24-1A0A075B6N3 115 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 A0A1B0GW64 132 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 D6R8Y8 96 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 FNDC10F2Z333 226 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 PLA2G2CQ5R387 149 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 RASL11AQ6T310 242 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 ZNF581Q9P0T4 197 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 A0A0U1RRA0 63 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 S100A7L2Q5SY68 101 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 RUSC1-AS1Q66K80 236 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 LINC01551Q86U37 167 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 Q8TCH9 128 aa13.68□□□□□ -0.22
CROCCP3-201ENST00000263511 LY6G6EA0A0G2JKS1 128 aa13.67□□□□□ -0.22
CROCCP3-201ENST00000263511 NDUFS6O75380 124 aaKnown RBP13.67□□□□□ -0.22
CROCCP3-201ENST00000263511 LINC00205P59089 165 aa13.67□□□□□ -0.22
CROCCP3-201ENST00000263511 U3KQA8 63 aa13.67□□□□□ -0.22
CROCCP3-201ENST00000263511 CADP27708 2225 aa13.67□□□□□ -0.22
CROCCP3-201ENST00000263511 PKDREJQ9NTG1 2253 aa13.67□□□□□ -0.22
CROCCP3-201ENST00000263511 ETV2O00321 342 aaPredicted RBP13.67□□□□□ -0.22
CROCCP3-201ENST00000263511 VCYO14598 125 aa13.67□□□□□ -0.22
CROCCP3-201ENST00000263511 RPRMLQ8N4K4 120 aa13.67□□□□□ -0.22
CROCCP3-201ENST00000263511 CXCL1P09341 107 aa13.67□□□□□ -0.22
CROCCP3-201ENST00000263511 SEC11AP67812 179 aa13.67□□□□□ -0.22
CROCCP3-201ENST00000263511 TMEM249Q2WGJ8 235 aa13.67□□□□□ -0.22
CROCCP3-201ENST00000263511 CEACAM8P31997 349 aaPredicted RBP13.67□□□□□ -0.22
CROCCP3-201ENST00000263511 GATA4P43694 442 aa13.67□□□□□ -0.22
CROCCP3-201ENST00000263511 LY96Q9Y6Y9 160 aa13.67□□□□□ -0.22
CROCCP3-201ENST00000263511 IGHV1-69DA0A0B4J2H0 117 aa13.66□□□□□ -0.22
CROCCP3-201ENST00000263511 H3BUT2 72 aa13.66□□□□□ -0.22
CROCCP3-201ENST00000263511 IGHV1-69P01742 117 aa13.66□□□□□ -0.22
CROCCP3-201ENST00000263511 RIPPLY3P57055 190 aa13.66□□□□□ -0.22
CROCCP3-201ENST00000263511 TNFSF13O75888 250 aa13.66□□□□□ -0.22
CROCCP3-201ENST00000263511 TDGF1P3P51864 188 aa13.66□□□□□ -0.22
CROCCP3-201ENST00000263511 IGHV3-64A0A075B6Q5 118 aa13.66□□□□□ -0.22
CROCCP3-201ENST00000263511 FAM110DQ8TAY7 271 aaPredicted RBP13.66□□□□□ -0.22
CROCCP3-201ENST00000263511 J3QKU1 62 aa13.66□□□□□ -0.22
CROCCP3-201ENST00000263511 AMBPP02760 352 aa13.66□□□□□ -0.22
CROCCP3-201ENST00000263511 TEX43Q6ZNM6 134 aa13.66□□□□□ -0.22
CROCCP3-201ENST00000263511 LURAP1LQ8IV03 231 aa13.66□□□□□ -0.22
CROCCP3-201ENST00000263511 HOXA3O43365 443 aaPredicted RBP13.65□□□□□ -0.22
CROCCP3-201ENST00000263511 Q96MF0 132 aa13.65□□□□□ -0.22
CROCCP3-201ENST00000263511 DERL1Q9BUN8 251 aa13.65□□□□□ -0.22
CROCCP3-201ENST00000263511 USF3Q68DE3 2245 aa13.65□□□□□ -0.22
CROCCP3-201ENST00000263511 CACNA1HO95180 2353 aa13.65□□□□□ -0.22
CROCCP3-201ENST00000263511 IGFL4Q6B9Z1 124 aa13.65□□□□□ -0.22
CROCCP3-201ENST00000263511 IGHV4-39P01824 125 aa13.65□□□□□ -0.22
CROCCP3-201ENST00000263511 SHANK2-AS3Q9BTD1 123 aa13.65□□□□□ -0.22
CROCCP3-201ENST00000263511 JPT2Q9H910 190 aa13.65□□□□□ -0.22
CROCCP3-201ENST00000263511 A0A1W2PPI3 338 aa13.64□□□□□ -0.23
CROCCP3-201ENST00000263511 PSCAO43653 123 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms