RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 PAQR4Q8N4S7 273 aaPredicted RBP14.44□□□□□ -0.1
NOTCH3-201ENST00000263388 TREML4Q6UXN2 200 aa14.43□□□□□ -0.1
NOTCH3-201ENST00000263388 SUMO4Q6EEV6 95 aa14.43□□□□□ -0.1
NOTCH3-201ENST00000263388 C15orf32Q32M92 178 aa14.43□□□□□ -0.1
NOTCH3-201ENST00000263388 SPSB3Q6PJ21 355 aa14.43□□□□□ -0.1
NOTCH3-201ENST00000263388 PMS2P5A8MQ11 134 aa14.42□□□□□ -0.1
NOTCH3-201ENST00000263388 H0YIZ8 118 aa14.42□□□□□ -0.1
NOTCH3-201ENST00000263388 THBDP07204 575 aa14.42□□□□□ -0.1
NOTCH3-201ENST00000263388 OR10W1Q8NGF6 305 aa14.42□□□□□ -0.1
NOTCH3-201ENST00000263388 CHCHD5Q9BSY4 110 aa14.42□□□□□ -0.1
NOTCH3-201ENST00000263388 CITED1Q99966 193 aa14.42□□□□□ -0.1
NOTCH3-201ENST00000263388 IGHV3-64A0A075B6Q5 118 aa14.42□□□□□ -0.1
NOTCH3-201ENST00000263388 SPINK8P0C7L1 97 aa14.42□□□□□ -0.1
NOTCH3-201ENST00000263388 PRTN3P24158 256 aa14.42□□□□□ -0.1
NOTCH3-201ENST00000263388 GFI1BQ5VTD9 330 aa14.42□□□□□ -0.1
NOTCH3-201ENST00000263388 TEX43Q6ZNM6 134 aa14.42□□□□□ -0.1
NOTCH3-201ENST00000263388 RPRMLQ8N4K4 120 aa14.42□□□□□ -0.1
NOTCH3-201ENST00000263388 SPRR3Q9UBC9 169 aa14.42□□□□□ -0.1
NOTCH3-201ENST00000263388 WFDC1Q9HC57 220 aa14.41□□□□□ -0.1
NOTCH3-201ENST00000263388 IGHV1-18A0A0C4DH31 117 aa14.41□□□□□ -0.1
NOTCH3-201ENST00000263388 D6R8Y8 96 aa14.41□□□□□ -0.1
NOTCH3-201ENST00000263388 WDR83OSQ9Y284 106 aa14.41□□□□□ -0.1
NOTCH3-201ENST00000263388 TIMM23O14925 209 aa14.41□□□□□ -0.1
NOTCH3-201ENST00000263388 AMBPP02760 352 aa14.41□□□□□ -0.1
NOTCH3-201ENST00000263388 CHAC1Q9BUX1 264 aa14.41□□□□□ -0.1
NOTCH3-201ENST00000263388 SPANXCQ9NY87 97 aa14.41□□□□□ -0.1
NOTCH3-201ENST00000263388 H3BMM0 161 aa14.41□□□□□ -0.1
NOTCH3-201ENST00000263388 LILRA1O75019 489 aa14.4□□□□□ -0.1
NOTCH3-201ENST00000263388 IGHV2-26A0A0B4J1V2 119 aa14.4□□□□□ -0.1
NOTCH3-201ENST00000263388 LHFPL1Q86WI0 220 aa14.4□□□□□ -0.1
NOTCH3-201ENST00000263388 RSPO3Q9BXY4 272 aaPredicted RBP14.4□□□□□ -0.1
NOTCH3-201ENST00000263388 GTSF1LQ9H1H1 148 aa14.4□□□□□ -0.1
NOTCH3-201ENST00000263388 NUP210LQ5VU65 1888 aa14.4□□□□□ -0.1
NOTCH3-201ENST00000263388 GAGE12BA1L429 117 aa14.4□□□□□ -0.1
NOTCH3-201ENST00000263388 SRRM5B3KS81 715 aa14.4□□□□□ -0.1
NOTCH3-201ENST00000263388 KLF17Q5JT82 389 aaPredicted RBP14.4□□□□□ -0.1
NOTCH3-201ENST00000263388 TPTE2P1Q5T6R2 138 aa14.4□□□□□ -0.1
NOTCH3-201ENST00000263388 LINC01551Q86U37 167 aa14.39□□□□□ -0.11
NOTCH3-201ENST00000263388 MINOS1Q5TGZ0 78 aa14.39□□□□□ -0.11
NOTCH3-201ENST00000263388 BCL6BQ8N143 479 aaPredicted RBP14.39□□□□□ -0.11
NOTCH3-201ENST00000263388 MINOS1-NBL1R4GNA1 71 aa14.39□□□□□ -0.11
NOTCH3-201ENST00000263388 GAGE2AQ6NT46 116 aa14.39□□□□□ -0.11
NOTCH3-201ENST00000263388 INAFM2P0DMQ5 153 aa14.39□□□□□ -0.11
NOTCH3-201ENST00000263388 ZNF415Q09FC8 603 aa14.39□□□□□ -0.11
NOTCH3-201ENST00000263388 LY96Q9Y6Y9 160 aa14.39□□□□□ -0.11
NOTCH3-201ENST00000263388 EXOC3-AS1Q8N2X6 119 aa14.39□□□□□ -0.11
NOTCH3-201ENST00000263388 LYPD1Q8N2G4 141 aa14.39□□□□□ -0.11
NOTCH3-201ENST00000263388 TMEM8BA6NDV4 472 aa14.39□□□□□ -0.11
NOTCH3-201ENST00000263388 COLCA2A8K830 154 aa14.39□□□□□ -0.11
NOTCH3-201ENST00000263388 E9PLN8 166 aa14.39□□□□□ -0.11
NOTCH3-201ENST00000263388 C1orf194Q5T5A4 169 aa14.39□□□□□ -0.11
NOTCH3-201ENST00000263388 GFI1Q99684 422 aa14.39□□□□□ -0.11
NOTCH3-201ENST00000263388 CXCL1P09341 107 aa14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 CD24P25063 80 aa14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 C9orf153Q5TBE3 101 aa14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 NUP35Q8NFH5 326 aa14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 ZNF138P52744 262 aa14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 CD300EQ496F6 205 aaPredicted RBP14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 IGKV2-40A0A087WW87 121 aaPredicted RBP14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 IGKV2D-40P01614 121 aaPredicted RBP14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 PSG1P11464 419 aa14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 ERCC8Q13216 396 aa14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 LINC00477Q96M19 166 aa14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 FNDC10F2Z333 226 aa14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 PPIFP30405 207 aaKnown RBP14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 DSCR9P59020 149 aa14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 RASL10AQ92737 203 aa14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 A0A087WX48 190 aa14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 SUPT4H1P63272 117 aaKnown RBP14.38□□□□□ -0.11
NOTCH3-201ENST00000263388 MRAPQ8TCY5 172 aa14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 INS-IGF2F8WCM5 200 aa14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 INSP01308 110 aa14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 CRYGSP22914 178 aa14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 MAJINQ3KP22 176 aa14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 VCYO14598 125 aa14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 NPC2P61916 151 aa14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 UBE2V1Q13404 147 aa14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 GUSBP1Q15486 140 aa14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 TRAV41A0A0B4J266 112 aa14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 FLVCR1-AS1Q8TAF5 88 aa14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 RNF5Q99942 180 aa14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 MRPL27Q9P0M9 148 aaKnown RBP14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 SONP18583 2426 aaKnown RBP14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 NEUROG3Q9Y4Z2 214 aa14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 SRD5A1P18405 259 aa14.37□□□□□ -0.11
NOTCH3-201ENST00000263388 LYPD3O95274 346 aa14.36□□□□□ -0.11
NOTCH3-201ENST00000263388 IL18BPO95998 194 aa14.36□□□□□ -0.11
NOTCH3-201ENST00000263388 IGHV1-46P01743 117 aa14.36□□□□□ -0.11
NOTCH3-201ENST00000263388 CFHR1Q03591 330 aa14.36□□□□□ -0.11
NOTCH3-201ENST00000263388 NMSQ5H8A3 153 aa14.36□□□□□ -0.11
NOTCH3-201ENST00000263388 TMEM200BQ69YZ2 307 aa14.36□□□□□ -0.11
NOTCH3-201ENST00000263388 ZNF319Q9P2F9 582 aa14.36□□□□□ -0.11
NOTCH3-201ENST00000263388 OOSP1A8MZH6 123 aa14.36□□□□□ -0.11
NOTCH3-201ENST00000263388 RPL15P61313 204 aaKnown RBP14.36□□□□□ -0.11
NOTCH3-201ENST00000263388 TRAV40A0A0B4J280 105 aa14.36□□□□□ -0.11
NOTCH3-201ENST00000263388 MLNRO43193 412 aa14.36□□□□□ -0.11
NOTCH3-201ENST00000263388 PLSCR4Q9NRQ2 329 aa14.36□□□□□ -0.11
NOTCH3-201ENST00000263388 GGNQ86UU5 652 aa14.36□□□□□ -0.11
NOTCH3-201ENST00000263388 UBE2DNLQ8IWF7 75 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms