RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 FBN2P35556 2912 aa10.74□□□□□ -0.69
VMP1-201ENST00000262291 BRD3OSQ6XYD6 125 aa10.74□□□□□ -0.69
VMP1-201ENST00000262291 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
VMP1-201ENST00000262291 THAP8Q8NA92 274 aa10.74□□□□□ -0.69
VMP1-201ENST00000262291 BLNKQ8WV28 456 aa10.74□□□□□ -0.69
VMP1-201ENST00000262291 FAM168AQ92567 244 aa10.74□□□□□ -0.69
VMP1-201ENST00000262291 IGHV4-30-2A0A087WSY4 118 aa10.73□□□□□ -0.69
VMP1-201ENST00000262291 F6UZH7 168 aa10.73□□□□□ -0.69
VMP1-201ENST00000262291 CRYGCP07315 174 aa10.73□□□□□ -0.69
VMP1-201ENST00000262291 AMTP48728 403 aa10.73□□□□□ -0.69
VMP1-201ENST00000262291 KIAA1644Q3SXP7 199 aa10.73□□□□□ -0.69
VMP1-201ENST00000262291 OCC1Q8TAD7 63 aa10.73□□□□□ -0.69
VMP1-201ENST00000262291 AJUBAQ96IF1 538 aa10.73□□□□□ -0.69
VMP1-201ENST00000262291 LINC00479Q96M42 142 aa10.73□□□□□ -0.69
VMP1-201ENST00000262291 RNF2Q99496 336 aa10.73□□□□□ -0.69
VMP1-201ENST00000262291 SLC17A3O00476 420 aa10.73□□□□□ -0.69
VMP1-201ENST00000262291 IER3P46695 156 aa10.73□□□□□ -0.69
VMP1-201ENST00000262291 LYZP61626 148 aa10.73□□□□□ -0.69
VMP1-201ENST00000262291 ZNF586Q9NXT0 402 aa10.73□□□□□ -0.69
VMP1-201ENST00000262291 SELENOKQ9Y6D0 94 aa10.73□□□□□ -0.69
VMP1-201ENST00000262291 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.73□□□□□ -0.692e-8■■■■■ 85.3
VMP1-201ENST00000262291 USP9YO00507 2555 aaPredicted RBP10.72□□□□□ -0.69
VMP1-201ENST00000262291 TMEM238C9JI98 176 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 I3L2K1 104 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 PSG1P11464 419 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 LCN12Q6JVE5 192 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 C1orf122Q6ZSJ8 110 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 SGK494Q96LW2 274 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 NRN1Q9NPD7 142 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 NDUFA3O95167 84 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 PPBPP02775 128 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 COL8A1P27658 744 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 TSPOP30536 169 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 TAS2R45P59539 299 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 RPL19P84098 196 aaKnown RBP10.72□□□□□ -0.69
VMP1-201ENST00000262291 TMEM219Q86XT9 240 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 FAM19A2Q8N3H0 131 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 NHLRC2Q8NBF2 726 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 NPBQ8NG41 125 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 RCHY1Q96PM5 261 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 RNF5Q99942 180 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 PAXXQ9BUH6 204 aa10.72□□□□□ -0.69
VMP1-201ENST00000262291 OCIAD2Q56VL3 154 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 CCDC144NLQ6NUI1 221 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 PQLC2Q6ZP29 291 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 SFRP2Q96HF1 295 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 CSTL1Q9H114 145 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 CST9LQ9H4G1 147 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 ABCA12Q86UK0 2595 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 K7EIM0 57 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 GPX1P07203 203 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 RIPPLY3P57055 190 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 ZNF843Q8N446 348 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 TMEM116Q8NCL8 245 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 ARPC1AQ92747 370 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 NUDT11Q96G61 164 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 ZC2HC1AQ96GY0 325 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 GNB4Q9HAV0 340 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 TMEM167BQ9NRX6 74 aa10.71□□□□□ -0.69
VMP1-201ENST00000262291 CENPVL3A0A0U1RRI6 287 aa10.71□□□□□ -0.7
VMP1-201ENST00000262291 LINC01548A6NM66 108 aa10.71□□□□□ -0.7
VMP1-201ENST00000262291 PRSS47A8MTI9 375 aa10.71□□□□□ -0.7
VMP1-201ENST00000262291 K7EN84 100 aa10.71□□□□□ -0.7
VMP1-201ENST00000262291 UBE2E1P51965 193 aa10.71□□□□□ -0.7
VMP1-201ENST00000262291 GNG5P63218 68 aa10.71□□□□□ -0.7
VMP1-201ENST00000262291 SLC35B1P78383 322 aa10.71□□□□□ -0.7
VMP1-201ENST00000262291 SRSF1Q07955 248 aaKnown RBP eCLIP10.71□□□□□ -0.7
VMP1-201ENST00000262291 BCL6BQ8N143 479 aaPredicted RBP10.71□□□□□ -0.7
VMP1-201ENST00000262291 PIMREGQ9BSJ6 248 aa10.71□□□□□ -0.7
VMP1-201ENST00000262291 CSPG4Q6UVK1 2322 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 MDFIC2A0A1B0GVS7 189 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 SNURFLB1AK76 121 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 IGLC1P0CG04 106 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 YPEL3P61236 119 aaPredicted RBP10.7□□□□□ -0.7
VMP1-201ENST00000262291 FOXL1Q12952 345 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 PVRIGQ6DKI7 326 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 MAPK1IP1LQ8NDC0 245 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 OR1L4Q8NGR5 311 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 PTPN13Q12923 2485 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 IGHV3OR16-8A0A075B7F1 116 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 IGHV3-35A0A0C4DH35 117 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 NPFFO15130 113 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 NTF3P20783 257 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 MINOS1Q5TGZ0 78 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 C10orf105Q8TEF2 133 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 TRGV9Q99603 122 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 MINOS1-NBL1R4GNA1 71 aa10.7□□□□□ -0.7
VMP1-201ENST00000262291 ZANQ9Y493 2812 aa10.69□□□□□ -0.7
VMP1-201ENST00000262291 TRAV40A0A0B4J280 105 aa10.69□□□□□ -0.7
VMP1-201ENST00000262291 OR2J3O76001 311 aa10.69□□□□□ -0.7
VMP1-201ENST00000262291 IGKV1-17P01599 117 aa10.69□□□□□ -0.7
VMP1-201ENST00000262291 ECSCRQ19T08 205 aa10.69□□□□□ -0.7
VMP1-201ENST00000262291 CENPWQ5EE01 88 aa10.69□□□□□ -0.7
VMP1-201ENST00000262291 Q8N6K4 173 aa10.69□□□□□ -0.7
VMP1-201ENST00000262291 Q8N9W7 124 aa10.69□□□□□ -0.7
VMP1-201ENST00000262291 MRPL32Q9BYC8 188 aaKnown RBP10.69□□□□□ -0.7
VMP1-201ENST00000262291 ANKRD17O75179 2603 aaKnown RBP10.69□□□□□ -0.7
VMP1-201ENST00000262291 C3orf79P0CE67 100 aa10.69□□□□□ -0.7
VMP1-201ENST00000262291 FXYD5Q96DB9 178 aa10.69□□□□□ -0.7
VMP1-201ENST00000262291 RASL11BQ9BPW5 248 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms