RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 FAM90A2PQ658T7 463 aa21.46■■□□□ 1.03
SMARCD3-201ENST00000262188 OR4B1Q8NGF8 309 aa21.46■■□□□ 1.03
SMARCD3-201ENST00000262188 VAMP8Q9BV40 100 aa21.46■■□□□ 1.03
SMARCD3-201ENST00000262188 MAP1LC3BQ9GZQ8 125 aa21.46■■□□□ 1.03
SMARCD3-201ENST00000262188 COX11Q9Y6N1 276 aa21.46■■□□□ 1.03
SMARCD3-201ENST00000262188 PMS2P5A8MQ11 134 aa21.45■■□□□ 1.02
SMARCD3-201ENST00000262188 OR5G3P0C626 314 aa21.45■■□□□ 1.02
SMARCD3-201ENST00000262188 CNN1P51911 297 aaKnown RBP21.45■■□□□ 1.02
SMARCD3-201ENST00000262188 C2orf83Q53S99 150 aa21.45■■□□□ 1.02
SMARCD3-201ENST00000262188 PRIMA1Q86XR5 153 aa21.45■■□□□ 1.02
SMARCD3-201ENST00000262188 ZNF114Q8NC26 417 aa21.45■■□□□ 1.02
SMARCD3-201ENST00000262188 OR1L6Q8NGR2 347 aa21.45■■□□□ 1.02
SMARCD3-201ENST00000262188 LINC01006Q8NI28 216 aa21.45■■□□□ 1.02
SMARCD3-201ENST00000262188 GNPNAT1Q96EK6 184 aaPredicted RBP21.45■■□□□ 1.02
SMARCD3-201ENST00000262188 OR5B12Q96R08 314 aa21.45■■□□□ 1.02
SMARCD3-201ENST00000262188 KLK15Q9H2R5 256 aa21.45■■□□□ 1.02
SMARCD3-201ENST00000262188 BATFQ16520 125 aa21.45■■□□□ 1.02
SMARCD3-201ENST00000262188 SH3BGRL3Q9H299 93 aa21.45■■□□□ 1.02
SMARCD3-201ENST00000262188 OR2J3O76001 311 aa21.44■■□□□ 1.02
SMARCD3-201ENST00000262188 RPL15P61313 204 aaKnown RBP21.44■■□□□ 1.02
SMARCD3-201ENST00000262188 OR4C5Q8NGB2 326 aa21.44■■□□□ 1.02
SMARCD3-201ENST00000262188 CFAP161Q6P656 301 aa21.43■■□□□ 1.02
SMARCD3-201ENST00000262188 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.43■■□□□ 1.02
SMARCD3-201ENST00000262188 OR2G3Q8NGZ4 309 aa21.43■■□□□ 1.02
SMARCD3-201ENST00000262188 FNDC4Q9H6D8 234 aaPredicted RBP21.43■■□□□ 1.02
SMARCD3-201ENST00000262188 MDKP21741 143 aaPredicted RBP21.43■■□□□ 1.02
SMARCD3-201ENST00000262188 CEBPGP53567 150 aa21.43■■□□□ 1.02
SMARCD3-201ENST00000262188 RNF2Q99496 336 aa21.43■■□□□ 1.02
SMARCD3-201ENST00000262188 IGLV11-55A0A075B6I3 123 aa21.42■■□□□ 1.02
SMARCD3-201ENST00000262188 PSMB11A5LHX3 300 aa21.41■■□□□ 1.02
SMARCD3-201ENST00000262188 PRSS46E5RG02 174 aa21.41■■□□□ 1.02
SMARCD3-201ENST00000262188 PF4V1P10720 104 aa21.41■■□□□ 1.02
SMARCD3-201ENST00000262188 TFPI2P48307 235 aa21.41■■□□□ 1.02
SMARCD3-201ENST00000262188 SUB1P53999 127 aaKnown RBP eCLIP21.41■■□□□ 1.02
SMARCD3-201ENST00000262188 RAB11AP62491 216 aa21.41■■□□□ 1.02
SMARCD3-201ENST00000262188 OR51G1Q8NGK1 321 aa21.41■■□□□ 1.02
SMARCD3-201ENST00000262188 HAX1O00165 279 aa21.41■■□□□ 1.02
SMARCD3-201ENST00000262188 C16orf95Q9H693 158 aa21.41■■□□□ 1.02
SMARCD3-201ENST00000262188 MRPL36Q9P0J6 103 aaKnown RBP21.41■■□□□ 1.02
SMARCD3-201ENST00000262188 UQCR10Q9UDW1 63 aa21.41■■□□□ 1.02
SMARCD3-201ENST00000262188 IGHV3-23P01764 117 aa21.4■■□□□ 1.02
SMARCD3-201ENST00000262188 OPRK1P41145 380 aa21.4■■□□□ 1.02
SMARCD3-201ENST00000262188 RPUSD4Q96CM3 377 aaKnown RBP21.4■■□□□ 1.02
SMARCD3-201ENST00000262188 IGLV1-40P01703 118 aa21.39■■□□□ 1.02
SMARCD3-201ENST00000262188 RHOGP84095 191 aa21.39■■□□□ 1.02
SMARCD3-201ENST00000262188 OCIAD2Q56VL3 154 aa21.39■■□□□ 1.02
SMARCD3-201ENST00000262188 PVRIGQ6DKI7 326 aa21.39■■□□□ 1.02
SMARCD3-201ENST00000262188 TOMM20LQ6UXN7 152 aa21.39■■□□□ 1.02
SMARCD3-201ENST00000262188 KLHDC1Q8N7A1 406 aa21.39■■□□□ 1.02
SMARCD3-201ENST00000262188 OR5C1Q8NGR4 320 aa21.39■■□□□ 1.02
SMARCD3-201ENST00000262188 NDUFA7O95182 113 aa21.39■■□□□ 1.01
SMARCD3-201ENST00000262188 MT-CO2P00403 227 aa21.39■■□□□ 1.01
SMARCD3-201ENST00000262188 TRGV3P03979 118 aa21.39■■□□□ 1.01
SMARCD3-201ENST00000262188 ESDP10768 282 aa21.39■■□□□ 1.01
SMARCD3-201ENST00000262188 C11orf44Q8N8P7 122 aa21.39■■□□□ 1.01
SMARCD3-201ENST00000262188 NAT8Q9UHE5 227 aa21.39■■□□□ 1.01
SMARCD3-201ENST00000262188 FBXL7Q9UJT9 491 aa21.39■■□□□ 1.01
SMARCD3-201ENST00000262188 ZNF580Q9UK33 172 aa21.39■■□□□ 1.01
SMARCD3-201ENST00000262188 K7ERU9 68 aa21.38■■□□□ 1.01
SMARCD3-201ENST00000262188 TPPP2P59282 170 aa21.38■■□□□ 1.01
SMARCD3-201ENST00000262188 SLC38A11Q08AI6 406 aa21.38■■□□□ 1.01
SMARCD3-201ENST00000262188 OR10P1Q8NGE3 313 aa21.38■■□□□ 1.01
SMARCD3-201ENST00000262188 ANAPC16Q96DE5 110 aa21.38■■□□□ 1.01
SMARCD3-201ENST00000262188 K7EIM0 57 aa21.37■■□□□ 1.01
SMARCD3-201ENST00000262188 IGHG4P01861 327 aa21.37■■□□□ 1.01
SMARCD3-201ENST00000262188 LAMTOR2Q9Y2Q5 125 aa21.37■■□□□ 1.01
SMARCD3-201ENST00000262188 TRBV9A0A0B4J1U6 114 aa21.37■■□□□ 1.01
SMARCD3-201ENST00000262188 I3L2K1 104 aa21.37■■□□□ 1.01
SMARCD3-201ENST00000262188 STPG4Q8N801 248 aa21.37■■□□□ 1.01
SMARCD3-201ENST00000262188 ATP6V0CP27449 155 aa21.36■■□□□ 1.01
SMARCD3-201ENST00000262188 RNF114Q9Y508 228 aa21.36■■□□□ 1.01
SMARCD3-201ENST00000262188 PSMB8P28062 276 aa21.36■■□□□ 1.01
SMARCD3-201ENST00000262188 C15orf32Q32M92 178 aa21.36■■□□□ 1.01
SMARCD3-201ENST00000262188 OR5AU1Q8NGC0 362 aa21.36■■□□□ 1.01
SMARCD3-201ENST00000262188 OR4F5Q8NH21 305 aa21.36■■□□□ 1.01
SMARCD3-201ENST00000262188 GALR1P47211 349 aa21.35■■□□□ 1.01
SMARCD3-201ENST00000262188 RAB9AP51151 201 aa21.35■■□□□ 1.01
SMARCD3-201ENST00000262188 SLC35B1P78383 322 aa21.35■■□□□ 1.01
SMARCD3-201ENST00000262188 CD69Q07108 199 aa21.35■■□□□ 1.01
SMARCD3-201ENST00000262188 TCTEX1D4Q5JR98 221 aa21.35■■□□□ 1.01
SMARCD3-201ENST00000262188 MRPS16Q9Y3D3 137 aaKnown RBP21.35■■□□□ 1.01
SMARCD3-201ENST00000262188 A0A1B0GV50 99 aa21.34■■□□□ 1.01
SMARCD3-201ENST00000262188 IGHV3-11P01762 117 aa21.34■■□□□ 1.01
SMARCD3-201ENST00000262188 CYP2G1PQ6ZSU1 146 aa21.34■■□□□ 1.01
SMARCD3-201ENST00000262188 TMEM37Q8WXS4 190 aa21.34■■□□□ 1.01
SMARCD3-201ENST00000262188 CST9LQ9H4G1 147 aa21.34■■□□□ 1.01
SMARCD3-201ENST00000262188 MRPL27Q9P0M9 148 aaKnown RBP21.34■■□□□ 1.01
SMARCD3-201ENST00000262188 ATRQ13535 2644 aa21.34■■□□□ 1.01
SMARCD3-201ENST00000262188 FBN1P35555 2871 aaKnown RBP21.34■■□□□ 1.01
SMARCD3-201ENST00000262188 H7BYZ3 331 aa21.34■■□□□ 1.01
SMARCD3-201ENST00000262188 BCL2P10415 239 aa21.34■■□□□ 1.01
SMARCD3-201ENST00000262188 BAXQ07812 192 aa21.34■■□□□ 1.01
SMARCD3-201ENST00000262188 KRTAP24-1Q3LI83 254 aa21.34■■□□□ 1.01
SMARCD3-201ENST00000262188 TCF24Q7RTU0 167 aa21.34■■□□□ 1.01
SMARCD3-201ENST00000262188 ATP5IP56385 69 aaPredicted RBP21.33■■□□□ 1.01
SMARCD3-201ENST00000262188 CLPSL1A2RUU4 121 aa21.32■■□□□ 1
SMARCD3-201ENST00000262188 KCNIP4Q6PIL6 250 aa21.32■■□□□ 1
SMARCD3-201ENST00000262188 WIPF2Q8TF74 440 aaPredicted RBP21.32■■□□□ 1
SMARCD3-201ENST00000262188 FGF8P55075 233 aaPredicted RBP21.32■■□□□ 1
SMARCD3-201ENST00000262188 HBG1P69891 147 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms