RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 GAGE12GP0CL81 117 aa10.94□□□□□ -0.66
PDGFRB-201ENST00000261799 GAGE12IP0CL82 117 aa10.94□□□□□ -0.66
PDGFRB-201ENST00000261799 SLAQ13239 276 aa10.94□□□□□ -0.66
PDGFRB-201ENST00000261799 OSTCQ9NRP0 149 aa10.94□□□□□ -0.66
PDGFRB-201ENST00000261799 SCN2AQ99250 2005 aa10.94□□□□□ -0.66
PDGFRB-201ENST00000261799 LINC00473A8K010 186 aa10.94□□□□□ -0.66
PDGFRB-201ENST00000261799 NMSQ5H8A3 153 aa10.94□□□□□ -0.66
PDGFRB-201ENST00000261799 C10orf105Q8TEF2 133 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 IGKV1D-8A0A087WSZ0 117 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 IGHV2-70P01814 119 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 HBDP02042 147 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 ID3Q02535 119 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 SHANK2-AS3Q9BTD1 123 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 LSM4Q9Y4Z0 139 aaKnown RBP10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 SHISA3A0PJX4 238 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 LINC00311Q8N616 119 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 C1orf159Q96HA4 380 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 GAGE12JA6NER3 117 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 GAGE1Q13065 139 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 GAGE4Q13068 117 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 GAGE5Q13069 117 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 FOXE3Q13461 319 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 GAGE13Q4V321 117 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 KLHDC3Q9BQ90 382 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 GGTLC1Q9BX51 225 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 IGLV3-9A0A075B6K5 115 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 IGHV4-61A0A0C4DH41 118 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 C22orf46C9J442 243 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 MGST2Q99735 147 aa10.93□□□□□ -0.66
PDGFRB-201ENST00000261799 YPEL3P61236 119 aaPredicted RBP10.92□□□□□ -0.66
PDGFRB-201ENST00000261799 IGHV4-39P01824 125 aa10.92□□□□□ -0.66
PDGFRB-201ENST00000261799 GP9P14770 177 aa10.92□□□□□ -0.66
PDGFRB-201ENST00000261799 PLNP26678 52 aa10.92□□□□□ -0.66
PDGFRB-201ENST00000261799 C1orf194Q5T5A4 169 aa10.92□□□□□ -0.66
PDGFRB-201ENST00000261799 IGFL4Q6B9Z1 124 aa10.92□□□□□ -0.66
PDGFRB-201ENST00000261799 DPM2O94777 84 aa10.92□□□□□ -0.66
PDGFRB-201ENST00000261799 TCRAP04437 139 aa10.92□□□□□ -0.66
PDGFRB-201ENST00000261799 SPINK13Q1W4C9 94 aa10.92□□□□□ -0.66
PDGFRB-201ENST00000261799 TRPT1Q86TN4 253 aaKnown RBP10.92□□□□□ -0.66
PDGFRB-201ENST00000261799 TSKUQ8WUA8 353 aa10.92□□□□□ -0.66
PDGFRB-201ENST00000261799 LGALS1P09382 135 aaKnown RBP10.92□□□□□ -0.66
PDGFRB-201ENST00000261799 VWA8A3KMH1 1905 aa10.92□□□□□ -0.66
PDGFRB-201ENST00000261799 NMBP08949 121 aa10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 RNASE2P10153 161 aaKnown RBP10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 RASL11AQ6T310 242 aa10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 Q6ZR03 302 aa10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 LRRC75A-AS1Q8N1F1 130 aa10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 HS3ST6Q96QI5 342 aa10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 KNCNA6PVL3 124 aa10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 ETV2O00321 342 aaPredicted RBP10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 PRB4P10163 310 aaPredicted RBP10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 NKAPP1Q8N9T2 125 aa10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 DKK4Q9UBT3 224 aa10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 C5orf63A6NC05 138 aa10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 PAX4O43316 350 aa10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 SRP19P09132 144 aaKnown RBP10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 SMIM6P0DI80 62 aa10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 ATP5L2Q7Z4Y8 100 aa10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 PDE6HQ13956 83 aa10.91□□□□□ -0.66
PDGFRB-201ENST00000261799 FNDC10F2Z333 226 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 DKK1O94907 266 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 LAIR2Q6ISS4 152 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 Q6ZS49 121 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 Q8TAT8 98 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 KAAG1Q9UBP8 84 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 LOC102724200A0A096LPH7 203 aaPredicted RBP10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 IGHV7-4-1A0A0J9YVY3 117 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 A0A1W2PPI3 338 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 SSBP2P81877 361 aaPredicted RBP10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 SCN8AQ9UQD0 1980 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 COL5A1-AS1Q5SY13 56 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 THAP8Q8NA92 274 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 PLXNA4Q9HCM2 1894 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 IGHV3-64A0A075B6Q5 118 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 TRAV2A0A0B4J234 112 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 IGKV1-16P04430 117 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 KLK9Q9UKQ9 250 aa10.9□□□□□ -0.66
PDGFRB-201ENST00000261799 A8MWV9 139 aa10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 NRGNQ92686 78 aa10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 IGHV1OR15-1A0A075B7D0 117 aa10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 A0A087WWL8 130 aa10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 PAX2Q02962 417 aa10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 PLEKHB2Q96CS7 222 aa10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 ATOH7Q8N100 152 aa10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 ASCC3Q8N3C0 2202 aaKnown RBP10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 C17orf58Q2M2W7 97 aa10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 CD300EQ496F6 205 aaPredicted RBP10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 LYZL1Q6UWQ5 148 aa10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 CSTL1Q9H114 145 aa10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 LINC01559Q495D7 138 aa10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 IMMP2LQ96T52 175 aa10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 SSBP4Q9BWG4 385 aaPredicted RBP10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 ZNRD1Q9P1U0 126 aa10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 CKAP5Q14008 2032 aa10.89□□□□□ -0.67
PDGFRB-201ENST00000261799 WDR81Q562E7 1941 aa10.88□□□□□ -0.67
PDGFRB-201ENST00000261799 TRAV13-1A0A0B4J241 112 aa10.88□□□□□ -0.67
PDGFRB-201ENST00000261799 NDUFS7O75251 213 aa10.88□□□□□ -0.67
PDGFRB-201ENST00000261799 Q8NFD4 153 aa10.88□□□□□ -0.67
PDGFRB-201ENST00000261799 IGF2BP2-AS1Q96M15 143 aa10.88□□□□□ -0.67
PDGFRB-201ENST00000261799 TPRP12270 2363 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms