RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 NPIPB5A8MRT5 1133 aa6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 NPFFO15130 113 aa6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 GFRA3O60609 400 aa6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 LYZL1Q6UWQ5 148 aa6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 FAM159AQ6UWV7 190 aa6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 C16orf47Q6ZP98 133 aaPredicted RBP6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 TMEM158Q8WZ71 300 aa6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 KIF26AQ9ULI4 1882 aaPredicted RBP6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 URB1O60287 2271 aaKnown RBP6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 UBE2L6O14933 153 aa6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 PYYP10082 97 aa6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 SPATA12Q7Z6I5 190 aa6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 WFDC3Q8IUB2 231 aa6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 RCHY1Q96PM5 261 aa6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 TRAV21A0A0B4J279 112 aa6.84□□□□□ -1.32
SNCAIP-201ENST00000261367 IGHV3-13P01766 116 aa6.84□□□□□ -1.32
SNCAIP-201ENST00000261367 NTF4P34130 210 aa6.84□□□□□ -1.32
SNCAIP-201ENST00000261367 RPL39P5Q59GN2 51 aa6.84□□□□□ -1.32
SNCAIP-201ENST00000261367 SPATA25Q9BR10 227 aa6.84□□□□□ -1.32
SNCAIP-201ENST00000261367 NUP210Q8TEM1 1887 aaPredicted RBP6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 LOXL3P58215 753 aa6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 SHISA5Q8N114 240 aa6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 ZNF501Q96CX3 271 aaPredicted RBP6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 IGKV1-12A0A0C4DH73 117 aa6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 IGKV1D-12P01611 117 aa6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 Q6ZS92 163 aa6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 C1orf162Q8NEQ5 155 aaPredicted RBP6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 C1orf147Q96MC9 270 aaPredicted RBP6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 FAM106CPP0CH98 169 aa6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 NPPCP23582 126 aa6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 FOXC1Q12948 553 aa6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 FAM106AQ4KMX7 169 aa6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 Q71RC1 249 aaPredicted RBP6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 EEF1AKMT3Q96AZ1 226 aa6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 SRSF8Q9BRL6 282 aaKnown RBP6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 LAMTOR3Q9UHA4 124 aa6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 TRPM6Q9BX84 2022 aa6.83□□□□□ -1.32
SNCAIP-201ENST00000261367 LOC102723996A0A087X1L8 192 aa6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 UCNP55089 124 aa6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 ALKBH6Q3KRA9 238 aa6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 FAM57AQ8TBR7 257 aa6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 TNFRSF18Q9Y5U5 241 aa6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 TP53BP1Q12888 1972 aaPredicted RBP6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 KLF14Q8TD94 323 aaPredicted RBP6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 LINC00312Q9Y6C7 94 aa6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 VCYO14598 125 aa6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 SAA1P0DJI8 122 aaPredicted RBP6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 PF4V1P10720 104 aa6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 SUMO2P61956 95 aaKnown RBP6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 IGHV1-45A0A0A0MS14 117 aa6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 C21orf140B9A014 251 aa6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 COX7A1P24310 79 aa6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 CTRLP40313 264 aa6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 DPH3P1Q9H4G8 78 aa6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 SPTA1P02549 2419 aa6.82□□□□□ -1.32
SNCAIP-201ENST00000261367 MRPL14Q6P1L8 145 aaKnown RBP6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 RNF125Q96EQ8 232 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 SRXN1Q9BYN0 137 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 F8VRH5 84 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 NDUFB8O95169 186 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 SFTA2Q6UW10 78 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 RNF5Q99942 180 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 TRAV40A0A0B4J280 105 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 TIMM23O14925 209 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 NABP1Q96AH0 204 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 NOTCH2Q04721 2471 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 IGHV3OR15-7A0A075B7D8 119 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 A0A087WX48 190 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 A0A0G2JRQ6 117 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 SOCS3O14543 225 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 TMEM14CQ9P0S9 112 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 FZR1Q9UM11 496 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 LOC400499M0QZD8 3231 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 CACNA1BQ00975 2339 aa6.81□□□□□ -1.32
SNCAIP-201ENST00000261367 Q6ZUT4 128 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 PLA2G2EQ9NZK7 142 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 PRSS29PA6NIE9 313 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 K7EQS6 105 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 SH2D1AO60880 128 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 THBDP07204 575 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 SAA2P0DJI9 122 aaPredicted RBP6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 GATA2P23769 480 aaPredicted RBP6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 Q6ZRM9 215 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 TMEM167AQ8TBQ9 72 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 JMJD8Q96S16 334 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 IGHV3-21A0A0B4J1V1 117 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 C22orf46C9J442 243 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 OVOL1O14753 267 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 IGKV1D-33P01593 117 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 IGKV1-33P01594 117 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 HIST1H4AP62805 103 aaKnown RBP6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 TDRG1Q3Y452 100 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 CCL17Q92583 94 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 IGKV1-27A0A075B6S5 117 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 H3BTX0 84 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 NUPR1O60356 82 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 MAGEA5P43359 124 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 ZNF114Q8NC26 417 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms